FFCP PHASE1:Mm9::chr7:134094019..134094030,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=233878|HGNC=|MCL_coexpression_id=1|UniProt=Q4V9Z5|association_with_transcript=-18bp_to_NM_001252566,NM_001252567,NM_144926_5end|description=CAGE_peak_4_at_Sez6l2_5end|id=chr7:134094019..134094030,+|ontology_enrichment_celltype=CL:0000117!2.43e-14!23;CL:0000337!2.43e-14!23;CL:0000540!2.55e-14!33;CL:0000047!2.55e-14!33;CL:0000031!2.55e-14!33;CL:0000404!2.55e-14!33;CL:0000393!5.46e-10!39;CL:0000211!5.46e-10!39;CL:0000221!1.11e-09!44;CL:0000133!1.11e-09!44;CL:0002319!1.26e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,5.77e-25,23;CL:0000337,5.77e-25,23;CL:0000540,3.04e-18,33;CL:0000047,3.04e-18,33;CL:0000031,3.04e-18,33;CL:0000404,3.04e-18,33;CL:0000393,2.57e-14,39;CL:0000211,2.57e-14,39;CL:0002319,2.51e-12,43;CL:0000221,6.88e-12,44;CL:0000133,6.88e-12,44;CL:0002609,6.76e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.53e-30!71;UBERON:0003075!3.53e-30!71;UBERON:0007284!3.53e-30!71;UBERON:0004121!1.43e-28!102;UBERON:0000924!1.43e-28!102;UBERON:0006601!1.43e-28!102;UBERON:0000073!1.92e-28!75;UBERON:0001016!1.92e-28!75;UBERON:0001017!2.67e-28!73;UBERON:0005743!2.67e-28!73;UBERON:0001049!2.46e-25!52;UBERON:0005068!2.46e-25!52;UBERON:0006241!2.46e-25!52;UBERON:0007135!2.46e-25!52;UBERON:0000955!4.93e-24!50;UBERON:0006238!4.93e-24!50;UBERON:0000033!1.17e-23!63;UBERON:0002616!2.24e-23!49;UBERON:0003056!4.78e-22!49;UBERON:0003080!4.54e-20!40;UBERON:0002020!1.82e-19!34;UBERON:0002780!2.98e-19!39;UBERON:0001890!2.98e-19!39;UBERON:0006240!2.98e-19!39;UBERON:0002791!2.95e-16!29;UBERON:0003528!2.95e-16!29;UBERON:0001893!2.95e-16!29;UBERON:0007811!5.89e-12!86;UBERON:0000956!2.20e-11!21;UBERON:0001869!2.20e-11!21;UBERON:0000203!2.20e-11!21;UBERON:0002619!4.03e-09!17;UBERON:0000153!4.65e-09!94;UBERON:0002021!2.24e-08!10;UBERON:0000411!2.24e-08!10;UBERON:0001950!2.24e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.32e-49,54;UBERON:0001049,1.28e-46,52;UBERON:0005068,1.28e-46,52;UBERON:0006241,1.28e-46,52;UBERON:0007135,1.28e-46,52;UBERON:0001017,1.87e-45,73;UBERON:0001016,7.88e-44,75;UBERON:0000955,5.18e-40,47;UBERON:0006238,5.18e-40,47;UBERON:0002616,8.07e-39,46;UBERON:0002346,8.83e-39,64;UBERON:0003075,8.83e-39,64;UBERON:0007284,8.83e-39,64;UBERON:0002020,8.71e-36,34;UBERON:0003080,1.39e-35,40;UBERON:0004121,3.51e-34,95;UBERON:0000924,3.51e-34,95;UBERON:0006601,3.51e-34,95;UBERON:0002780,4.44e-34,39;UBERON:0001890,4.44e-34,39;UBERON:0006240,4.44e-34,39;UBERON:0010371,2.94e-32,73;UBERON:0003056,2.03e-30,49;UBERON:0003528,7.60e-30,29;UBERON:0002791,7.60e-30,29;UBERON:0001893,7.60e-30,29;UBERON:0010314,7.71e-24,92;UBERON:0000956,7.76e-21,21;UBERON:0001869,7.76e-21,21;UBERON:0000203,7.76e-21,21;UBERON:0002619,1.16e-16,17;UBERON:0002021,4.91e-14,10;UBERON:0000411,4.91e-14,10;UBERON:0001950,4.91e-14,10;UBERON:0000025,5.91e-14,114;UBERON:0004111,3.33e-12,122;UBERON:0003076,1.10e-10,12;UBERON:0003057,1.10e-10,12;UBERON:0002420,5.46e-10,8;UBERON:0007245,5.46e-10,8;UBERON:0010009,5.46e-10,8;UBERON:0010011,5.46e-10,8;UBERON:0000454,5.46e-10,8;UBERON:0011216,7.15e-09,194;UBERON:0002240,2.55e-08,6;UBERON:0005174,2.55e-08,6;UBERON:0001137,2.55e-08,6;UBERON:0000369,4.74e-07,5;UBERON:0002435,4.74e-07,5;UBERON:0000204,4.74e-07,5;UBERON:0010082,4.74e-07,5;UBERON:0001948,6.20e-07,5;UBERON:0002315,6.20e-07,5|phase1_expression=0,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,1.05798195854407,5.70448263155561,0,0,0,0,0,0.299600110518405,0,2.69592992002042,4.05017814995072,2.3135745748652,6.56997264128748,7.28866185140325,1.83736198822431,1.62937300731002,7.35375029288017,5.50579404996943,9.19348834213351,8.90917892886212,6.72620067423989,5.12330804173494,3.64639359389732,4.18774498502071,4.50210088025344,5.34793867218835,6.18720029494702,5.12538050876771,4.47358669980721,0.075726193333184,0.68014404096107,0,0,0,0.539703191637817,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0.593768556259299,0.520455980298408,0.913396434936424,0.922461989024234,1.20578112442098,0.705532242814229,0.251333182659351,0,0,0,0,0.220841518460394,0,0,7.61230072230023,6.49284791121711,0.255457055208591,0,0,0,10.7849260371472,8.6925114535539,6.65968066198181,11.6462294528825,9.46147192122223,6.64921742590592,6.16516799657479,0,0.124406970610093,0,0.631325567659422,0.130120442962704,0.459804208866946,0.540186389416048,0.60281927134286,0.748401490664606,0.640568601424249,1.3118241438362,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0.465067889500816,0,0.116765342367169,0.493679549740441,0.985004784474571,0.648550476366846,0.438599962275997,0.439100230582101,0.805238512562231,14.0894265537965,7.30622747892919,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0.203651327845314,0,0.280543279561274,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,10.1146871692309,7.501547941901,0.327869890753351,0,0.315508219416257,0.390438744296638,0.861693590931196,0,0.668396022247182,0.849229592366497,1.21443210502468,0.876767573733936,1.58115111178609,5.46246237917072,0,0,0,0,0,0,0.604647113929502,0.754420319023592,0.295301892880773,0.307435147943927,0,0.727067458955011,0.712994756769443,0.316036757935816,0,0,9.87274856685985,0,0.129358683782755,0.428674070063185,2.48276327099183,3.56737635204141,3.78462747384878,4.87143918583359,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,10.0129663085675,0,0.412773735926445,0,0,0,0,0,0,0,1.90934123603023,0.474503990371703,1.21991680276109,0.216010681643603,0,0.436725127492355,0,0.247960367176008,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,6.7770221114048,8.28585425712918,10.8850147553485,9.10821866421544,8.22099023724771,7.55393897389701,4.05013500139084,7.20513925158753,14.0474146785103,6.21312374102184,0,0.399024873401031,0.512200817262403,0.729320151204882,0.628839487883947,0.367687016900028,0.666740183404846,1.23621034343337,0.320919209591815,0.505394423527595,0.25347929989024,1.13175804831646,0.561849044819294,0.832326981263301,0.804096565378586,0.476293691283074,0.579421629724277,0.578727661391115,1.23625770240992,0.441596760403192,1.02860775715625,0.70990322463735,1.1921809497366,0.145346416632329,0.846984423737976,0.592302255241736,0.548783918618318,1.05227884575137,0.679020569229309,0.561142271657738,0.830445126869219,0.394017929502254,2.04615521584845,1.08455788830176,0.964533054905707,2.24829520144151,0.701794825336225,1.28922632428979,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p4@Sez6l2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=233878 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q4V9Z5 | |||
|association_with_transcript=-18bp_to_NM_001252566,NM_001252567,NM_144926_5end | |||
|cluster_id=chr7:134094019..134094030,+ | |||
|description=CAGE_peak_4_at_Sez6l2_5end | |||
|id=chr7:134094019..134094030,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.43e-14!23;CL:0000337!2.43e-14!23;CL:0000540!2.55e-14!33;CL:0000047!2.55e-14!33;CL:0000031!2.55e-14!33;CL:0000404!2.55e-14!33;CL:0000393!5.46e-10!39;CL:0000211!5.46e-10!39;CL:0000221!1.11e-09!44;CL:0000133!1.11e-09!44;CL:0002319!1.26e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.77e-25,23;CL:0000337,5.77e-25,23;CL:0000540,3.04e-18,33;CL:0000047,3.04e-18,33;CL:0000031,3.04e-18,33;CL:0000404,3.04e-18,33;CL:0000393,2.57e-14,39;CL:0000211,2.57e-14,39;CL:0002319,2.51e-12,43;CL:0000221,6.88e-12,44;CL:0000133,6.88e-12,44;CL:0002609,6.76e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.53e-30!71;UBERON:0003075!3.53e-30!71;UBERON:0007284!3.53e-30!71;UBERON:0004121!1.43e-28!102;UBERON:0000924!1.43e-28!102;UBERON:0006601!1.43e-28!102;UBERON:0000073!1.92e-28!75;UBERON:0001016!1.92e-28!75;UBERON:0001017!2.67e-28!73;UBERON:0005743!2.67e-28!73;UBERON:0001049!2.46e-25!52;UBERON:0005068!2.46e-25!52;UBERON:0006241!2.46e-25!52;UBERON:0007135!2.46e-25!52;UBERON:0000955!4.93e-24!50;UBERON:0006238!4.93e-24!50;UBERON:0000033!1.17e-23!63;UBERON:0002616!2.24e-23!49;UBERON:0003056!4.78e-22!49;UBERON:0003080!4.54e-20!40;UBERON:0002020!1.82e-19!34;UBERON:0002780!2.98e-19!39;UBERON:0001890!2.98e-19!39;UBERON:0006240!2.98e-19!39;UBERON:0002791!2.95e-16!29;UBERON:0003528!2.95e-16!29;UBERON:0001893!2.95e-16!29;UBERON:0007811!5.89e-12!86;UBERON:0000956!2.20e-11!21;UBERON:0001869!2.20e-11!21;UBERON:0000203!2.20e-11!21;UBERON:0002619!4.03e-09!17;UBERON:0000153!4.65e-09!94;UBERON:0002021!2.24e-08!10;UBERON:0000411!2.24e-08!10;UBERON:0001950!2.24e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.32e-49,54;UBERON:0001049,1.28e-46,52;UBERON:0005068,1.28e-46,52;UBERON:0006241,1.28e-46,52;UBERON:0007135,1.28e-46,52;UBERON:0001017,1.87e-45,73;UBERON:0001016,7.88e-44,75;UBERON:0000955,5.18e-40,47;UBERON:0006238,5.18e-40,47;UBERON:0002616,8.07e-39,46;UBERON:0002346,8.83e-39,64;UBERON:0003075,8.83e-39,64;UBERON:0007284,8.83e-39,64;UBERON:0002020,8.71e-36,34;UBERON:0003080,1.39e-35,40;UBERON:0004121,3.51e-34,95;UBERON:0000924,3.51e-34,95;UBERON:0006601,3.51e-34,95;UBERON:0002780,4.44e-34,39;UBERON:0001890,4.44e-34,39;UBERON:0006240,4.44e-34,39;UBERON:0010371,2.94e-32,73;UBERON:0003056,2.03e-30,49;UBERON:0003528,7.60e-30,29;UBERON:0002791,7.60e-30,29;UBERON:0001893,7.60e-30,29;UBERON:0010314,7.71e-24,92;UBERON:0000956,7.76e-21,21;UBERON:0001869,7.76e-21,21;UBERON:0000203,7.76e-21,21;UBERON:0002619,1.16e-16,17;UBERON:0002021,4.91e-14,10;UBERON:0000411,4.91e-14,10;UBERON:0001950,4.91e-14,10;UBERON:0000025,5.91e-14,114;UBERON:0004111,3.33e-12,122;UBERON:0003076,1.10e-10,12;UBERON:0003057,1.10e-10,12;UBERON:0002420,5.46e-10,8;UBERON:0007245,5.46e-10,8;UBERON:0010009,5.46e-10,8;UBERON:0010011,5.46e-10,8;UBERON:0000454,5.46e-10,8;UBERON:0011216,7.15e-09,194;UBERON:0002240,2.55e-08,6;UBERON:0005174,2.55e-08,6;UBERON:0001137,2.55e-08,6;UBERON:0000369,4.74e-07,5;UBERON:0002435,4.74e-07,5;UBERON:0000204,4.74e-07,5;UBERON:0010082,4.74e-07,5;UBERON:0001948,6.20e-07,5;UBERON:0002315,6.20e-07,5 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,1.05798195854407,5.70448263155561,0,0,0,0,0,0.299600110518405,0,2.69592992002042,4.05017814995072,2.3135745748652,6.56997264128748,7.28866185140325,1.83736198822431,1.62937300731002,7.35375029288017,5.50579404996943,9.19348834213351,8.90917892886212,6.72620067423989,5.12330804173494,3.64639359389732,4.18774498502071,4.50210088025344,5.34793867218835,6.18720029494702,5.12538050876771,4.47358669980721,0.075726193333184,0.68014404096107,0,0,0,0.539703191637817,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0.593768556259299,0.520455980298408,0.913396434936424,0.922461989024234,1.20578112442098,0.705532242814229,0.251333182659351,0,0,0,0,0.220841518460394,0,0,7.61230072230023,6.49284791121711,0.255457055208591,0,0,0,10.7849260371472,8.6925114535539,6.65968066198181,11.6462294528825,9.46147192122223,6.64921742590592,6.16516799657479,0,0.124406970610093,0,0.631325567659422,0.130120442962704,0.459804208866946,0.540186389416048,0.60281927134286,0.748401490664606,0.640568601424249,1.3118241438362,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0.465067889500816,0,0.116765342367169,0.493679549740441,0.985004784474571,0.648550476366846,0.438599962275997,0.439100230582101,0.805238512562231,14.0894265537965,7.30622747892919,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.444756087689741,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0.203651327845314,0,0.280543279561274,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,10.1146871692309,7.501547941901,0.327869890753351,0,0.315508219416257,0.390438744296638,0.861693590931196,0,0.668396022247182,0.849229592366497,1.21443210502468,0.876767573733936,1.58115111178609,5.46246237917072,0,0,0,0,0,0,0.604647113929502,0.754420319023592,0.295301892880773,0.307435147943927,0,0.727067458955011,0.712994756769443,0.316036757935816,0,0,9.87274856685985,0,0.129358683782755,0.428674070063185,2.48276327099183,3.56737635204141,3.78462747384878,4.87143918583359,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,10.0129663085675,0,0.412773735926445,0,0,0,0,0,0,0,1.90934123603023,0.474503990371703,1.21991680276109,0.216010681643603,0,0.436725127492355,0,0.247960367176008,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,6.7770221114048,8.28585425712918,10.8850147553485,9.10821866421544,8.22099023724771,7.55393897389701,4.05013500139084,7.20513925158753,14.0474146785103,6.21312374102184,0,0.399024873401031,0.512200817262403,0.729320151204882,0.628839487883947,0.367687016900028,0.666740183404846,1.23621034343337,0.320919209591815,0.505394423527595,0.25347929989024,1.13175804831646,0.561849044819294,0.832326981263301,0.804096565378586,0.476293691283074,0.579421629724277,0.578727661391115,1.23625770240992,0.441596760403192,1.02860775715625,0.70990322463735,1.1921809497366,0.145346416632329,0.846984423737976,0.592302255241736,0.548783918618318,1.05227884575137,0.679020569229309,0.561142271657738,0.830445126869219,0.394017929502254,2.04615521584845,1.08455788830176,0.964533054905707,2.24829520144151,0.701794825336225,1.28922632428979,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p4@Sez6l2 | |||
}} |
Latest revision as of 21:52, 25 September 2015
Short description: | p4@Sez6l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sez6l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -18bp_to_NM_001252566, NM_001252567, NM_144926_5end |
EntrezGene: | Sez6l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.77e-25 | 23 |
neuroblast (sensu Vertebrata) | 5.77e-25 | 23 |
neuron | 3.04e-18 | 33 |
neuronal stem cell | 3.04e-18 | 33 |
neuroblast | 3.04e-18 | 33 |
electrically signaling cell | 3.04e-18 | 33 |
electrically responsive cell | 2.57e-14 | 39 |
electrically active cell | 2.57e-14 | 39 |
neural cell | 2.51e-12 | 43 |
ectodermal cell | 6.88e-12 | 44 |
neurectodermal cell | 6.88e-12 | 44 |
neuron of cerebral cortex | 6.76e-07 | 6 |