FFCP PHASE1:Mm9::chr1:169619168..169619180,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:169619168..169619180,-
|short_description=p@chr1:169619168..169619180,-
|description=CAGE_peak_at_chr1:169619168..169619180,-
|association_with_transcript=...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3032 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:169619168..169619180,- | |||
|description=CAGE_peak_at_chr1:169619168..169619180,- | |||
|id=chr1:169619168..169619180,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.78e-26,2;CL:0002604,1.78e-26,2;CL:0002453,4.93e-15,8;CL:0000710,8.69e-14,1;CL:0002077,8.69e-14,1;CL:0005014,8.69e-14,1;CL:0002315,8.69e-14,1;CL:0002490,8.69e-14,1;CL:0000333,3.56e-12,10;CL:0000095,3.56e-12,10;CL:0000243,3.56e-12,10;CL:0000123,3.56e-12,10;CL:0000125,3.56e-12,10;CL:0000030,3.56e-12,10;CL:0000339,3.56e-12,10;CL:0000128,1.61e-09,6;CL:0000126,1.61e-09,6;CL:0000127,1.61e-09,6;CL:0000075,4.45e-08,7;CL:0000878,1.32e-07,2;CL:0000129,1.32e-07,2;CL:0000197,1.52e-07,2;CL:0002491,1.52e-07,2;CL:0000098,1.52e-07,2;CL:0000221,1.86e-07,44;CL:0000133,1.86e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.72e-08,7;UBERON:0003022,2.72e-08,7;UBERON:0002421,2.72e-08,7;UBERON:0000349,2.72e-08,7;UBERON:0002600,2.72e-08,7;UBERON:0004766,1.52e-07,2;UBERON:0008193,1.52e-07,2;UBERON:0005913,1.52e-07,2;UBERON:0011158,1.52e-07,2;UBERON:0005744,1.52e-07,2;UBERON:0003457,1.52e-07,2;UBERON:0008001,1.52e-07,2;UBERON:0007497,1.52e-07,2;UBERON:0009955,1.52e-07,2;UBERON:0003067,1.52e-07,2;UBERON:0002546,1.52e-07,2;UBERON:0007914,1.52e-07,2;UBERON:0005253,1.52e-07,2;UBERON:0002227,1.52e-07,2;UBERON:0001846,1.52e-07,2;UBERON:0004339,1.52e-07,2;UBERON:0002105,1.52e-07,2;UBERON:0001678,1.52e-07,2;UBERON:0003128,1.52e-07,2;UBERON:0001694,1.52e-07,2;UBERON:0004681,1.52e-07,2;UBERON:0001839,1.52e-07,2;UBERON:0001690,1.52e-07,2;UBERON:0001844,1.52e-07,2;UBERON:0001849,1.52e-07,2;UBERON:0002499,1.52e-07,2;UBERON:0001855,1.52e-07,2;UBERON:0011137,1.52e-07,2;UBERON:0001703,1.52e-07,2;UBERON:0010323,1.52e-07,2;UBERON:0003129,1.52e-07,2;UBERON:0003069,1.52e-07,2;UBERON:0003051,1.52e-07,2;UBERON:0004637,1.52e-07,2;UBERON:0004761,1.52e-07,2;UBERON:0010113,1.52e-07,2;UBERON:0009123,1.52e-07,2;UBERON:0010351,1.52e-07,2;UBERON:0009617,1.52e-07,2;UBERON:0005641,1.52e-07,2;UBERON:0010349,1.52e-07,2 | |||
|phase1_expression=0.640595388419176,0,0,0,0,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.68822784320151,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,6.37089929929968,2.52758868796568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92109152660777,0,0,0,0.571301968807607,0,0,0,0,0,0,0,0.395658863190582,0.823388792421687,0,0,0.56276261003168,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0.251333182659351,0,0.144599356919912,0,0.485300549842228,0,0,0,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.124406970610093,0,0,0.390361328888111,0,0.360124259610698,0.30140963567143,0.272145996605311,0.12811372028485,0.281105173679186,0,0,0.189106080167819,0,0,0,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.210289948564127,0.720332286654991,0,0,0,0,0,0,0,0,0.949058123089023,0.164698954724011,0,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0.238968797952552,0.891194696329576,1.13230612315533,0,0,0.395287777946524,0,0,1.06839362200353,0.488660878060728,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0.49465875882444,0.484393280087717,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.628839487883947,0.183843508450014,0.666740183404846,0.412070114477788,0.320919209591815,0.505394423527595,0,0.377252682772152,0.37456602987953,0.384150914429216,0.574354689556133,0.476293691283074,0.115884325944855,0.578727661391115,0.824171801606613,0.588795680537589,0,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.338458431566706,0.548783918618318,0,0,0.561142271657738,0.355905054372522,0.492522411877817,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0.467863216890817,0.644613162144895,0.956441660344217,0.661774257358546,0.231867835620421 | |phase1_expression=0.640595388419176,0,0,0,0,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.68822784320151,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,6.37089929929968,2.52758868796568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92109152660777,0,0,0,0.571301968807607,0,0,0,0,0,0,0,0.395658863190582,0.823388792421687,0,0,0.56276261003168,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,1.69012103732017,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0.251333182659351,0,0.144599356919912,0,0.485300549842228,0,0,0,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.124406970610093,0,0,0.390361328888111,0,0.360124259610698,0.30140963567143,0.272145996605311,0.12811372028485,0.281105173679186,0,0,0.189106080167819,0,0,0,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.210289948564127,0.720332286654991,0,0,0,0,0,0,0,0,0.949058123089023,0.164698954724011,0,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0.238968797952552,0.891194696329576,1.13230612315533,0,0,0.395287777946524,0,0,1.06839362200353,0.488660878060728,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0.49465875882444,0.484393280087717,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.628839487883947,0.183843508450014,0.666740183404846,0.412070114477788,0.320919209591815,0.505394423527595,0,0.377252682772152,0.37456602987953,0.384150914429216,0.574354689556133,0.476293691283074,0.115884325944855,0.578727661391115,0.824171801606613,0.588795680537589,0,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.338458431566706,0.548783918618318,0,0,0.561142271657738,0.355905054372522,0.492522411877817,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0.467863216890817,0.644613162144895,0.956441660344217,0.661774257358546,0.231867835620421 | ||
|short_description=p@chr1:169619168..169619180,- | |||
}} | }} |
Latest revision as of 04:57, 5 August 2015
Short description: | p@chr1:169619168..169619180, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:169619168..169619180, - |
Coexpression cluster: | MCL_coexpression_mm9:3032 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.78e-26 | 2 |
astrocyte of the hippocampus | 1.78e-26 | 2 |
oligodendrocyte precursor cell | 4.93e-15 | 8 |
neurecto-epithelial cell | 8.69e-14 | 1 |
ecto-epithelial cell | 8.69e-14 | 1 |
auditory epithelial support cell | 8.69e-14 | 1 |
supporting cell of cochlea | 8.69e-14 | 1 |
organ of Corti supporting cell | 8.69e-14 | 1 |
migratory neural crest cell | 3.56e-12 | 10 |
neuron associated cell | 3.56e-12 | 10 |
glial cell (sensu Vertebrata) | 3.56e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 3.56e-12 | 10 |
glial cell | 3.56e-12 | 10 |
glioblast | 3.56e-12 | 10 |
glioblast (sensu Vertebrata) | 3.56e-12 | 10 |
oligodendrocyte | 1.61e-09 | 6 |
macroglial cell | 1.61e-09 | 6 |
astrocyte | 1.61e-09 | 6 |
columnar/cuboidal epithelial cell | 4.45e-08 | 7 |
central nervous system macrophage | 1.32e-07 | 2 |
microglial cell | 1.32e-07 | 2 |
receptor cell | 1.52e-07 | 2 |
auditory epithelial cell | 1.52e-07 | 2 |
sensory epithelial cell | 1.52e-07 | 2 |
ectodermal cell | 1.86e-07 | 44 |
neurectodermal cell | 1.86e-07 | 44 |