FFCP PHASE1:Mm9::chr8:13435504..13435518,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:13435504..13435518,+
|short_description=p3@Fam70b
|description=CAGE_peak_3_at_Fam70b_5end
|association_with_transcript=45bp_to_ENSMUST00000167071,ENSMUST00...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=272465 | |EntrezGene=272465 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3613 | |||
|TSSclassifier=NA | |||
|UniProt=G5E908,G3UWB7,Q5FW56 | |UniProt=G5E908,G3UWB7,Q5FW56 | ||
|association_with_transcript=45bp_to_ENSMUST00000167071,ENSMUST00000167505,NM_001143671,NM_001143672,uc009kxx.2,uc009kxy.2,uc009kxz.2_5end | |||
|cluster_id=chr8:13435504..13435518,+ | |||
|description=CAGE_peak_3_at_Fam70b_5end | |||
|id=chr8:13435504..13435518,+ | |||
|ontology_enrichment_celltype=CL:0000107!1.89e-10!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.41e-29,9;CL:0000197,1.05e-12,2;CL:0002491,1.05e-12,2;CL:0000098,1.05e-12,2;CL:0000540,5.21e-10,33;CL:0000047,5.21e-10,33;CL:0000031,5.21e-10,33;CL:0000404,5.21e-10,33;CL:0000221,2.80e-09,44;CL:0000133,2.80e-09,44;CL:0000393,2.49e-08,39;CL:0000211,2.49e-08,39;CL:0002319,1.80e-07,43;CL:0002374,3.14e-07,1;CL:0000202,3.14e-07,1;CL:0000199,3.14e-07,1;CL:0000855,3.14e-07,1;CL:0000589,3.14e-07,1;CL:0000710,4.10e-07,1;CL:0002077,4.10e-07,1;CL:0005014,4.10e-07,1;CL:0002315,4.10e-07,1;CL:0002490,4.10e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!1.89e-10!9;UBERON:0000010!5.61e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.41e-29,9;UBERON:0000010,4.13e-24,11;UBERON:0000013,8.20e-18,3;UBERON:0004766,1.05e-12,2;UBERON:0008193,1.05e-12,2;UBERON:0005913,1.05e-12,2;UBERON:0011158,1.05e-12,2;UBERON:0005744,1.05e-12,2;UBERON:0003457,1.05e-12,2;UBERON:0008001,1.05e-12,2;UBERON:0007497,1.05e-12,2;UBERON:0009955,1.05e-12,2;UBERON:0003067,1.05e-12,2;UBERON:0002546,1.05e-12,2;UBERON:0007914,1.05e-12,2;UBERON:0005253,1.05e-12,2;UBERON:0002227,1.05e-12,2;UBERON:0001846,1.05e-12,2;UBERON:0004339,1.05e-12,2;UBERON:0002105,1.05e-12,2;UBERON:0001678,1.05e-12,2;UBERON:0003128,1.05e-12,2;UBERON:0001694,1.05e-12,2;UBERON:0004681,1.05e-12,2;UBERON:0001839,1.05e-12,2;UBERON:0001690,1.05e-12,2;UBERON:0001844,1.05e-12,2;UBERON:0001849,1.05e-12,2;UBERON:0002499,1.05e-12,2;UBERON:0001855,1.05e-12,2;UBERON:0011137,1.05e-12,2;UBERON:0001703,1.05e-12,2;UBERON:0010323,1.05e-12,2;UBERON:0003129,1.05e-12,2;UBERON:0003069,1.05e-12,2;UBERON:0003051,1.05e-12,2;UBERON:0004637,1.05e-12,2;UBERON:0004761,1.05e-12,2;UBERON:0010113,1.05e-12,2;UBERON:0009123,1.05e-12,2;UBERON:0010351,1.05e-12,2;UBERON:0009617,1.05e-12,2;UBERON:0005641,1.05e-12,2;UBERON:0010349,1.05e-12,2;UBERON:0000011,3.05e-08,3;UBERON:0010313,4.26e-08,3;UBERON:0002342,4.26e-08,3;UBERON:0002005,4.26e-08,3;UBERON:0005428,4.26e-08,3;UBERON:0005062,4.26e-08,3;UBERON:0007100,1.26e-07,18;UBERON:0000948,1.26e-07,18;UBERON:0005498,1.26e-07,18;UBERON:0004140,1.26e-07,18;UBERON:0009881,1.26e-07,18;UBERON:0004141,1.26e-07,18;UBERON:0003084,1.26e-07,18;UBERON:0007005,1.26e-07,18;UBERON:0004139,1.26e-07,18;UBERON:0004291,1.26e-07,18;UBERON:0001153,8.98e-07,1;UBERON:0001045,8.98e-07,1 | |||
|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,2.81686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.301445281105245,0,0,0,0.86759614151947,0,0.323533699894818,0.441683036920787,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0.511430914660661,0,0,0,0.373220911830279,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0.771335564436891,0.232533944750408,0.536546802799238,0.233530684734339,0.493679549740441,2.13417703302824,2.02672023864639,1.90059983652932,1.53685080703735,2.28150911892632,0.210289948564127,0,0,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0.658795818896044,0.251335208800269,0,0.779856348476481,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0,0.160550589987792,0,0,0.252470927204373,0.94652465824877,1.56175497718655,1.72338718186239,2.38968797952552,1.33679204449436,0.849229592366497,1.61924280669958,7.3063964477828,3.95287777946523,0,0.283880170416537,0,0.162886959353576,0.989820737835213,1.32745138339963,0,0,0.188605079755898,0,0,0.775284879504663,0.363533729477506,0.712994756769443,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0.49465875882444,0,0.0603129249281559,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.436725127492355,0.539457385539283,0.578574190077352,0.26175594198403,0.259229946583586,0,0,0,0.165458490457098,0,0,0,0,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.19318959403219,0.375364950902364,0.73260649706906,0.214368379079066,0,0,0,0.572895513439397,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0,0,0.249810577937946,0,0,0.191288332068843,0.441182838239031,0.695603506861264 | |phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,2.81686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.301445281105245,0,0,0,0.86759614151947,0,0.323533699894818,0.441683036920787,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0.511430914660661,0,0,0,0.373220911830279,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0.771335564436891,0.232533944750408,0.536546802799238,0.233530684734339,0.493679549740441,2.13417703302824,2.02672023864639,1.90059983652932,1.53685080703735,2.28150911892632,0.210289948564127,0,0,0,0,0,0,0,0,0.190225626112559,0.474529061544512,0.658795818896044,0.251335208800269,0,0.779856348476481,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0,0.160550589987792,0,0,0.252470927204373,0.94652465824877,1.56175497718655,1.72338718186239,2.38968797952552,1.33679204449436,0.849229592366497,1.61924280669958,7.3063964477828,3.95287777946523,0,0.283880170416537,0,0.162886959353576,0.989820737835213,1.32745138339963,0,0,0.188605079755898,0,0,0.775284879504663,0.363533729477506,0.712994756769443,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0.49465875882444,0,0.0603129249281559,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.436725127492355,0.539457385539283,0.578574190077352,0.26175594198403,0.259229946583586,0,0,0,0.165458490457098,0,0,0,0,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.19318959403219,0.375364950902364,0.73260649706906,0.214368379079066,0,0,0,0.572895513439397,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0,0,0.249810577937946,0,0,0.191288332068843,0.441182838239031,0.695603506861264 | ||
|short_description=p3@Fam70b | |||
}} | }} |
Latest revision as of 19:00, 1 October 2015
Short description: | p3@Fam70b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam70b_5end |
Coexpression cluster: | MCL_coexpression_mm9:3613 |
Association with transcript: | 45bp_to_ENSMUST00000167071, ENSMUST00000167505, NM_001143671, NM_001143672, uc009kxx.2, uc009kxy.2, uc009kxz.2_5end |
EntrezGene: | Fam70b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.41e-29 | 9 |
receptor cell | 1.05e-12 | 2 |
auditory epithelial cell | 1.05e-12 | 2 |
sensory epithelial cell | 1.05e-12 | 2 |
neuron | 5.21e-10 | 33 |
neuronal stem cell | 5.21e-10 | 33 |
neuroblast | 5.21e-10 | 33 |
electrically signaling cell | 5.21e-10 | 33 |
ectodermal cell | 2.80e-09 | 44 |
neurectodermal cell | 2.80e-09 | 44 |
electrically responsive cell | 2.49e-08 | 39 |
electrically active cell | 2.49e-08 | 39 |
neural cell | 1.80e-07 | 43 |
ear hair cell | 3.14e-07 | 1 |
auditory hair cell | 3.14e-07 | 1 |
mechanoreceptor cell | 3.14e-07 | 1 |
sensory hair cell | 3.14e-07 | 1 |
cochlear inner hair cell | 3.14e-07 | 1 |
neurecto-epithelial cell | 4.10e-07 | 1 |
ecto-epithelial cell | 4.10e-07 | 1 |
auditory epithelial support cell | 4.10e-07 | 1 |
supporting cell of cochlea | 4.10e-07 | 1 |
organ of Corti supporting cell | 4.10e-07 | 1 |