FFCP PHASE1:Hg19::chr11:82782952..82782971,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:82782952..82782971,- to FFCP PHASE1:Hg19::chr11:82782952..82782971,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27314 | |EntrezGene=27314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9770 | |HGNC=9770 | ||
|TSSclassifier=strong | |||
|UniProt=Q6MZH2 | |UniProt=Q6MZH2 | ||
|association_with_transcript=0bp_to_ENST00000534141_5end | |||
|cluster_id=chr11:82782952..82782971,- | |||
|description=CAGE_peak_5_at_RAB30_5end | |||
|id=chr11:82782952..82782971,- | |||
|ontology_enrichment_celltype=CL:0000542!2.03e-08!53;CL:0000051!2.03e-08!53;CL:0000945!3.20e-08!24;CL:0000826!3.20e-08!24;CL:0000838!4.77e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.88e-11;13!CL:0000945;8.04e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.70e-10,14;CL:0000945,1.06e-07,24;CL:0000826,1.06e-07,24;CL:0000542,2.81e-07,53;CL:0000051,2.81e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.98e-11;82!UBERON:0006215;9.37e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.09e-27!115;UBERON:0001017!2.47e-24!82;UBERON:0005743!9.95e-24!86;UBERON:0000073!1.07e-22!94;UBERON:0001016!1.07e-22!94;UBERON:0001049!6.01e-22!57;UBERON:0005068!6.01e-22!57;UBERON:0006241!6.01e-22!57;UBERON:0007135!6.01e-22!57;UBERON:0000955!6.43e-19!69;UBERON:0006238!6.43e-19!69;UBERON:0002616!9.18e-18!59;UBERON:0003080!4.83e-17!42;UBERON:0002780!1.05e-16!41;UBERON:0001890!1.05e-16!41;UBERON:0006240!1.05e-16!41;UBERON:0001893!4.83e-16!34;UBERON:0002020!1.09e-15!34;UBERON:0003528!1.09e-15!34;UBERON:0002791!2.01e-15!33;UBERON:0001869!5.52e-15!32;UBERON:0003075!2.52e-14!86;UBERON:0007284!2.52e-14!86;UBERON:0002346!6.16e-14!90;UBERON:0002619!3.56e-13!22;UBERON:0001950!2.75e-12!20;UBERON:0000153!4.90e-11!129;UBERON:0007811!4.90e-11!129;UBERON:0000956!5.23e-11!25;UBERON:0000203!5.23e-11!25;UBERON:0004121!1.68e-10!169;UBERON:0000924!2.04e-10!173;UBERON:0006601!2.04e-10!173;UBERON:0000033!4.22e-10!123;UBERON:0003056!5.86e-10!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.14e-28;34!UBERON:0000073;1.09e-27;53!UBERON:0002616;1.09e-27;53!UBERON:0002791;2.27e-27;32!UBERON:0002780;4.30e-27;41!UBERON:0001890;4.30e-27;41!UBERON:0001869;5.64e-27;32!UBERON:0003528;2.47e-26;34!UBERON:0002020;2.47e-26;34!UBERON:0001950;2.54e-26;20!UBERON:0002619;2.75e-26;22!UBERON:0000956;1.36e-22;25!UBERON:0000203;1.36e-22;25!UBERON:0001017;4.87e-19;75!UBERON:0000955;1.89e-18;68!UBERON:0001016;1.53e-16;83!UBERON:0000200;5.94e-12;6!UBERON:0004733;3.84e-10;12!UBERON:0002028;3.84e-10;12!UBERON:0001871;4.11e-10;6!UBERON:0002420;6.03e-10;9!UBERON:0007245;6.03e-10;9!UBERON:0010009;6.03e-10;9!UBERON:0010011;6.03e-10;9!UBERON:0000454;6.03e-10;9!UBERON:0000125;1.14e-09;9!UBERON:0002308;1.14e-09;9!UBERON:0009663;1.26e-09;7!UBERON:0007023;2.40e-09;114!UBERON:0004732;3.14e-09;13!UBERON:0002298;2.73e-08;6!UBERON:0011216;3.21e-08;132!UBERON:0001870;5.44e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.57e-48,56;UBERON:0005068,1.57e-48,56;UBERON:0006241,1.57e-48,56;UBERON:0007135,1.57e-48,56;UBERON:0001017,2.01e-47,81;UBERON:0000073,1.66e-46,53;UBERON:0002616,1.66e-46,53;UBERON:0001016,4.79e-43,89;UBERON:0000955,1.39e-39,68;UBERON:0006238,1.39e-39,68;UBERON:0002780,2.59e-37,41;UBERON:0001890,2.59e-37,41;UBERON:0003080,2.59e-37,41;UBERON:0006240,2.59e-37,41;UBERON:0001893,2.17e-34,34;UBERON:0003075,1.25e-32,82;UBERON:0007284,1.25e-32,82;UBERON:0001869,1.53e-31,32;UBERON:0003528,2.59e-31,34;UBERON:0002020,2.59e-31,34;UBERON:0002791,4.12e-31,32;UBERON:0002346,1.62e-30,86;UBERON:0007023,2.61e-30,114;UBERON:0001950,5.08e-27,20;UBERON:0002619,5.39e-27,22;UBERON:0003056,1.73e-25,61;UBERON:0000956,3.30e-23,25;UBERON:0000203,3.30e-23,25;UBERON:0010371,4.66e-23,104;UBERON:0010314,1.07e-20,132;UBERON:0004121,2.03e-20,171;UBERON:0000924,2.03e-20,171;UBERON:0006601,2.03e-20,171;UBERON:0011216,9.82e-16,223;UBERON:0000200,3.47e-12,6;UBERON:0003076,4.68e-12,15;UBERON:0003057,4.68e-12,15;UBERON:0004733,3.42e-10,12;UBERON:0002028,3.42e-10,12;UBERON:0007277,3.42e-10,12;UBERON:0001871,3.51e-10,6;UBERON:0002420,8.37e-10,9;UBERON:0007245,8.37e-10,9;UBERON:0010009,8.37e-10,9;UBERON:0010011,8.37e-10,9;UBERON:0000454,8.37e-10,9;UBERON:0000125,1.71e-09,9;UBERON:0002308,1.71e-09,9;UBERON:0009663,1.83e-09,7;UBERON:0004732,2.82e-09,13;UBERON:0000025,2.02e-08,192;UBERON:0002298,2.16e-08,6;UBERON:0001870,3.99e-07,3;UBERON:0001896,8.87e-07,3;UBERON:0005290,8.87e-07,3;UBERON:0010096,8.87e-07,3 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0.872338524100369,0,0,0,0,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0.305653622991805,0.57470412614962,0.236132343941038,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,1.00707360754392,0.995184627411951,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,3.27683166757279,2.66852776159066,2.13365111283254,2.00197993518006,1.14950487990897,0.661044872784862,1.90810750907073,5.12291672198504,2.93618594685469,3.82273228125229,1.32171328579026,1.12101712596307,0,2.55722701147983,2.35806457649499,2.87842098599313,0.501559486172034,1.95553359980154,0.946895611469467,0,0.222820913770347,0.294605907474837,1.10766947291811,0.541607727530031,0.25618263945135,0.390178042679635,0.164437904603676,0,0.869409257205157,2.66915813691709,1.60524496853828,3.1360657141493,0.453237370790265,0.766440987203842,0.34362744548263,1.26509846009751,0,0,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0.821127996921047,0.403213486449465,0.534880391567015,1.15859523106239,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.189069634328136,0,0,0.785874452986276,0,0,0.324547393654683,0.522389211897802,0.664789802594326,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0,0.622422070799533,0,0,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0.368502951935304,0.206651562351531,0,0.247266929278557,0,0.718618141816238,0,0,0.277064115484183,0.877955241761676,0.30648779579902,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0.37223371266318,0.168776332241266,0.292311015483596,0,0.184099797284599,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0.365921118388786,0.662648841607426,0.232387885739037,0.414644220061482,0.504641701751257,0.72995471815166,0,0.643240938192885,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.772057809126758,0.653638332277218,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,4.92663237895944,0.088048434013226,0.207328115540772,0.432359860250884,0.75745460055828,0.190493682876507,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,2.29723871668228,1.42636905040718,0,0.410952645100767,0.179060963239896,0.112085143993527,0.394061520403854,1.2937654491571,0.385029108839245,0.508189248444927,1.30139853857622,3.86644406388848,1.67516265334349,3.82763250991898,0,0,0,0.24538298343828,0,0,0.207970861530807,0.356857977594324,0.788512075169673,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0,0.521301686808497,0,0.343143423810856,0.620304078368662,1.72571360654893,1.28073069364133,0.303127571446259,0,0,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0.902399225814824,0.231046011313244,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0.650756789328606,0.721287081534056,0.0915694648183434,0.082509499920588,0,0,0,0,0,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0.421258456238981,0,0,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0.844430541190656,0.329294892959902,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.411362273086194,0,1.08006287447623,0,0.747768497892312,0.962479855263359,0.245040215981032,1.11481905075431,0.721346064882224,0.142283686696828,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0.321176150207399,0,0.425846237690326,0,0,0,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0.18714054040822,0.73254089635947,0.728163130497081,0.445773537109913,0,0,0,0.921482106297696,0.994147647766298,2.53204949538923,0.222617410045812,0,0,0.597743964753209,1.38141957765574,0.251932747854276,0.102268682502155,0.615424027305347,0.311039587661807,0.449341755736634,0.179021174675609,0,0.789147245095469,0,0,1.93866549219044,2.59750674853184,3.99227596002388,0.7812832832557,0.61221999997337,0.72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| ||
|short_description=p5@RAB30 | |||
}} | }} |
Latest revision as of 18:25, 24 September 2015
Short description: | p5@RAB30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RAB30_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000534141_5end |
EntrezGene: | RAB30 |
HGNC: | 9770 |
UniProt: | Q6MZH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.70e-10 | 14 |
lymphocyte of B lineage | 1.06e-07 | 24 |
pro-B cell | 1.06e-07 | 24 |
lymphocyte | 2.81e-07 | 53 |
common lymphoid progenitor | 2.81e-07 | 53 |