FFCP PHASE1:Hg19::chr12:50222187..50222203,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:50222187..50222203,- to FFCP PHASE1:Hg19::chr12:50222187..50222203,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57701 | |EntrezGene=57701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29321 | |HGNC=29321 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCH0,E2QRB5 | |UniProt=Q9HCH0,E2QRB5 | ||
|association_with_transcript=4bp_to_ENST00000335999,ENST00000354423,NM_001037806,uc009zlk.2_5end | |||
|cluster_id=chr12:50222187..50222203,- | |||
|description=CAGE_peak_1_at_NCKAP5L_5end | |||
|id=chr12:50222187..50222203,- | |||
|ontology_enrichment_celltype=CL:0000144!4.36e-14!625;CL:0002057!1.28e-13!42;CL:0000222!2.69e-13!119;CL:0002371!1.37e-12!591;CL:0000860!7.56e-12!45;CL:0000183!1.83e-11!59;CL:0000557!2.06e-11!71;CL:0000055!9.12e-11!180;CL:0002194!1.74e-10!63;CL:0000576!1.74e-10!63;CL:0000040!1.74e-10!63;CL:0000559!1.74e-10!63;CL:0002009!3.06e-10!65;CL:0000766!4.98e-10!76;CL:0000192!5.36e-10!42;CL:0000514!5.36e-10!42;CL:0000839!8.63e-10!70;CL:0000187!1.07e-09!54;CL:0000359!1.19e-09!32;CL:0000680!1.39e-09!57;CL:0000056!1.39e-09!57;CL:0000355!1.39e-09!57;CL:0000723!9.38e-09!436;CL:0000220!1.16e-08!246;CL:0000034!1.99e-08!444;CL:0002321!2.24e-08!248;CL:0000048!3.82e-08!430;CL:0000393!4.82e-07!60;CL:0000211!4.82e-07!60;CL:0000012!5.91e-07!682;CL:0000548!6.98e-07!679;CL:0000004!6.98e-07!679;CL:0000255!6.98e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.44e-12;33!CL:0002057;7.44e-12;33!CL:0000473;1.79e-10;39!CL:0000234;1.79e-10;39!CL:0000359;3.74e-09;32!CL:0000192;1.80e-07;43!CL:0000576;2.50e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.37e-14,48;CL:0000234,5.37e-14,48;CL:0000860,1.28e-13,42;CL:0002057,1.28e-13,42;CL:0000222,2.45e-13,121;CL:0000557,1.21e-12,67;CL:0002194,9.47e-12,59;CL:0000576,9.47e-12,59;CL:0000040,9.47e-12,59;CL:0000559,9.47e-12,59;CL:0002009,1.89e-11,61;CL:0000766,4.40e-11,72;CL:0000839,6.65e-11,66;CL:0000192,8.88e-10,43;CL:0000514,8.88e-10,43;CL:0000359,1.19e-09,32;CL:0000187,1.57e-09,55;CL:0000680,2.00e-09,58;CL:0000056,2.00e-09,58;CL:0000355,2.00e-09,58;CL:0000723,5.41e-09,433;CL:0000034,1.17e-08,441;CL:0002321,1.84e-08,250;CL:0000048,2.25e-08,427;CL:0000393,6.16e-07,61;CL:0000211,6.16e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;3.70e-10;42!CL:0000514;1.80e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.97e-21!216;UBERON:0000468!7.17e-17!659;UBERON:0004872!2.09e-15!84;UBERON:0000467!7.80e-15!625;UBERON:0002049!1.37e-14!79;UBERON:0007798!1.37e-14!79;UBERON:0000480!1.94e-14!626;UBERON:0002204!2.04e-14!167;UBERON:0001981!1.55e-13!60;UBERON:0007500!1.55e-13!60;UBERON:0004537!1.55e-13!60;UBERON:0006965!1.55e-13!60;UBERON:0000055!1.42e-12!69;UBERON:0001637!3.97e-12!42;UBERON:0003509!3.97e-12!42;UBERON:0004572!3.97e-12!42;UBERON:0004535!8.57e-12!110;UBERON:0001009!8.68e-12!113;UBERON:0003914!8.17e-11!118;UBERON:0000926!1.82e-10!448;UBERON:0004120!1.82e-10!448;UBERON:0006603!1.82e-10!448;UBERON:0000923!1.87e-10!604;UBERON:0005291!1.87e-10!604;UBERON:0006598!1.87e-10!604;UBERON:0002532!1.87e-10!604;UBERON:0002050!2.98e-10!605;UBERON:0005423!2.98e-10!605;UBERON:0004573!7.71e-10!33;UBERON:0004571!7.71e-10!33;UBERON:0000922!8.08e-10!612;UBERON:0002371!2.20e-09!80;UBERON:0001134!3.24e-09!61;UBERON:0002036!3.24e-09!61;UBERON:0003082!3.24e-09!61;UBERON:0001474!6.01e-09!86;UBERON:0004290!8.61e-09!70;UBERON:0002385!1.48e-08!63;UBERON:0001015!1.48e-08!63;UBERON:0000383!1.48e-08!63;UBERON:0000119!2.11e-08!312;UBERON:0000483!2.45e-08!309;UBERON:0000062!6.38e-08!511;UBERON:0002405!1.15e-07!115;UBERON:0000025!3.35e-07!194;UBERON:0000914!4.04e-07!83;UBERON:0002329!4.04e-07!83;UBERON:0003077!4.04e-07!83;UBERON:0003059!4.04e-07!83;UBERON:0007282!4.04e-07!83;UBERON:0009618!4.04e-07!83;UBERON:0007285!4.04e-07!83;UBERON:0004765!4.90e-07!101;UBERON:0001434!4.90e-07!101;UBERON:0000490!7.37e-07!138;UBERON:0000486!8.51e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.80e-09;42!UBERON:0003509;3.80e-09;42!UBERON:0004572;3.80e-09;42!UBERON:0004573;5.24e-09;33!UBERON:0004571;5.24e-09;33!UBERON:0007500;1.32e-08;56!UBERON:0001981;1.32e-08;56!UBERON:0004537;1.32e-08;56!UBERON:0000055;7.02e-07;65 | |||
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| ||
|short_description=p1@NCKAP5L | |||
}} | }} |
Latest revision as of 17:20, 18 September 2015
Short description: | p1@NCKAP5L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCKAP5L_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000335999, ENST00000354423, NM_001037806, uc009zlk.2_5end |
EntrezGene: | NCKAP5L |
HGNC: | 29321 |
UniProt: | Q9HCH0E2QRB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.37e-14 | 48 |
phagocyte | 5.37e-14 | 48 |
classical monocyte | 1.28e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.28e-13 | 42 |
mesodermal cell | 2.45e-13 | 121 |
granulocyte monocyte progenitor cell | 1.21e-12 | 67 |
monopoietic cell | 9.47e-12 | 59 |
monocyte | 9.47e-12 | 59 |
monoblast | 9.47e-12 | 59 |
promonocyte | 9.47e-12 | 59 |
macrophage dendritic cell progenitor | 1.89e-11 | 61 |
myeloid leukocyte | 4.40e-11 | 72 |
myeloid lineage restricted progenitor cell | 6.65e-11 | 66 |
smooth muscle cell | 8.88e-10 | 43 |
smooth muscle myoblast | 8.88e-10 | 43 |
vascular associated smooth muscle cell | 1.19e-09 | 32 |
muscle cell | 1.57e-09 | 55 |
muscle precursor cell | 2.00e-09 | 58 |
myoblast | 2.00e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.00e-09 | 58 |
somatic stem cell | 5.41e-09 | 433 |
stem cell | 1.17e-08 | 441 |
embryonic cell | 1.84e-08 | 250 |
multi fate stem cell | 2.25e-08 | 427 |
electrically responsive cell | 6.16e-07 | 61 |
electrically active cell | 6.16e-07 | 61 |