FFCP PHASE1:Hg19::chr19:42498369..42498390,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:42498369..42498390,- to FFCP PHASE1:Hg19::chr19:42498369..42498390,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=478 | |EntrezGene=478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=801 | |HGNC=801 | ||
|TSSclassifier=strong | |||
|UniProt=P13637,C9JBU2,B7Z2T0,B3KNQ8 | |UniProt=P13637,C9JBU2,B7Z2T0,B3KNQ8 | ||
|association_with_transcript=0bp_to_ENST00000302102,ENST00000448429,ENST00000545399,NM_152296,uc002osg.2,uc002osh.2,uc010xwh.1_5end | |||
|cluster_id=chr19:42498369..42498390,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_ATP1A3_5end | |||
|id=chr19:42498369..42498390,- | |||
|ontology_enrichment_celltype=CL:0000084!3.05e-07!25;CL:0000827!3.05e-07!25;CL:0000542!3.57e-07!53;CL:0000051!3.57e-07!53;CL:0000838!5.83e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.42e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.51e-08,25;CL:0000827,4.51e-08,25;CL:0000542,4.75e-07,53;CL:0000051,4.75e-07,53;CL:0000838,8.46e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.31e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;4.51e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.09e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.05e-33!94;UBERON:0001016!7.05e-33!94;UBERON:0005743!7.94e-32!86;UBERON:0001017!3.06e-30!82;UBERON:0007023!4.35e-30!115;UBERON:0001049!4.74e-30!57;UBERON:0005068!4.74e-30!57;UBERON:0006241!4.74e-30!57;UBERON:0007135!4.74e-30!57;UBERON:0002346!4.64e-26!90;UBERON:0003075!1.40e-24!86;UBERON:0007284!1.40e-24!86;UBERON:0000955!5.01e-24!69;UBERON:0006238!5.01e-24!69;UBERON:0002616!1.90e-23!59;UBERON:0002780!2.23e-23!41;UBERON:0001890!2.23e-23!41;UBERON:0006240!2.23e-23!41;UBERON:0003080!3.43e-22!42;UBERON:0002020!3.23e-19!34;UBERON:0003528!3.23e-19!34;UBERON:0001893!4.34e-19!34;UBERON:0002791!2.20e-18!33;UBERON:0001869!4.18e-18!32;UBERON:0002619!1.53e-16!22;UBERON:0003056!4.38e-16!61;UBERON:0000924!1.75e-15!173;UBERON:0006601!1.75e-15!173;UBERON:0001950!3.88e-15!20;UBERON:0004121!2.44e-14!169;UBERON:0000956!7.70e-14!25;UBERON:0000203!7.70e-14!25;UBERON:0000153!5.82e-12!129;UBERON:0007811!5.82e-12!129;UBERON:0000033!1.10e-10!123;UBERON:0003076!5.88e-09!15;UBERON:0003057!5.88e-09!15;UBERON:0004732!9.97e-08!13;UBERON:0004733!3.21e-07!12;UBERON:0002028!3.21e-07!12;UBERON:0007277!3.21e-07!12;UBERON:0002308!6.85e-07!9;UBERON:0000125!6.85e-07!9;UBERON:0002420!7.53e-07!9;UBERON:0007245!7.53e-07!9;UBERON:0010009!7.53e-07!9;UBERON:0010011!7.53e-07!9;UBERON:0000454!7.53e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.93e-21;41!UBERON:0001890;1.93e-21;41!UBERON:0000073;2.67e-21;53!UBERON:0002616;2.67e-21;53!UBERON:0003528;7.38e-21;34!UBERON:0002020;7.38e-21;34!UBERON:0001893;8.95e-21;34!UBERON:0001869;9.31e-21;32!UBERON:0002791;1.79e-20;32!UBERON:0002619;2.08e-20;22!UBERON:0001950;1.23e-18;20!UBERON:0000956;8.96e-18;25!UBERON:0000203;8.96e-18;25!UBERON:0000955;1.12e-14;68!UBERON:0001016;3.22e-14;83!UBERON:0001017;5.06e-14;75!UBERON:0007023;2.06e-09;114!UBERON:0004732;6.18e-09;13!UBERON:0000922;6.82e-09;49!UBERON:0004733;2.67e-08;12!UBERON:0002028;2.67e-08;12!UBERON:0000125;2.82e-08;9!UBERON:0002308;2.82e-08;9!UBERON:0002420;3.19e-08;9!UBERON:0007245;3.19e-08;9!UBERON:0010009;3.19e-08;9!UBERON:0010011;3.19e-08;9!UBERON:0000454;3.19e-08;9!UBERON:0001894;7.88e-07;7!UBERON:0000200;8.78e-07;6!UBERON:0001871;9.00e-07;6 | |||
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| ||
|short_description=p1@ATP1A3 | |||
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Latest revision as of 07:39, 18 September 2015
Short description: | p1@ATP1A3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ATP1A3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000302102, ENST00000448429, ENST00000545399, NM_152296, uc002osg.2, uc002osh.2, uc010xwh.1_5end |
EntrezGene: | ATP1A3 |
HGNC: | 801 |
UniProt: | P13637C9JBU2B7Z2T0B3KNQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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T cell | 4.51e-08 | 25 |
pro-T cell | 4.51e-08 | 25 |
lymphocyte | 4.75e-07 | 53 |
common lymphoid progenitor | 4.75e-07 | 53 |
lymphoid lineage restricted progenitor cell | 8.46e-07 | 52 |
Ontology term | p-value | n |
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neuroectodermal tumor | 5.09e-07 | 10 |