FFCP PHASE1:Hg19::chr22:30970560..30970577,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:30970560..30970577,- to FFCP PHASE1:Hg19::chr22:30970560..30970577,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9514 | |EntrezGene=9514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24240 | |HGNC=24240 | ||
|TSSclassifier=strong | |||
|UniProt=Q99999 | |UniProt=Q99999 | ||
|association_with_transcript=0bp_to_ENST00000402369,ENST00000406361_5end | |||
|cluster_id=chr22:30970560..30970577,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_7_at_GAL3ST1_5end | |||
|id=chr22:30970560..30970577,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.40e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.10e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.09e-32!57;UBERON:0005068!5.09e-32!57;UBERON:0006241!5.09e-32!57;UBERON:0007135!5.09e-32!57;UBERON:0007023!4.18e-29!115;UBERON:0002616!1.90e-26!59;UBERON:0000073!3.30e-26!94;UBERON:0001016!3.30e-26!94;UBERON:0001017!2.19e-25!82;UBERON:0005743!3.75e-25!86;UBERON:0000955!1.49e-24!69;UBERON:0006238!1.49e-24!69;UBERON:0001893!2.03e-24!34;UBERON:0002020!3.11e-24!34;UBERON:0003528!3.11e-24!34;UBERON:0003075!1.19e-23!86;UBERON:0007284!1.19e-23!86;UBERON:0002780!2.02e-23!41;UBERON:0001890!2.02e-23!41;UBERON:0006240!2.02e-23!41;UBERON:0002791!8.57e-23!33;UBERON:0003080!1.04e-22!42;UBERON:0002346!3.86e-22!90;UBERON:0001869!5.60e-21!32;UBERON:0003056!3.29e-16!61;UBERON:0002619!2.71e-15!22;UBERON:0001950!1.06e-14!20;UBERON:0002308!2.12e-14!9;UBERON:0000125!2.12e-14!9;UBERON:0002298!2.35e-13!8;UBERON:0000956!4.17e-13!25;UBERON:0000203!4.17e-13!25;UBERON:0000033!1.70e-12!123;UBERON:0004121!2.75e-12!169;UBERON:0000924!9.45e-12!173;UBERON:0006601!9.45e-12!173;UBERON:0000025!1.57e-11!194;UBERON:0000153!1.72e-11!129;UBERON:0007811!1.72e-11!129;UBERON:0002420!8.18e-11!9;UBERON:0007245!8.18e-11!9;UBERON:0010009!8.18e-11!9;UBERON:0010011!8.18e-11!9;UBERON:0000454!8.18e-11!9;UBERON:0009663!1.23e-10!7;UBERON:0003076!2.08e-10!15;UBERON:0003057!2.08e-10!15;UBERON:0000064!2.24e-10!219;UBERON:0004732!6.59e-10!13;UBERON:0000200!4.79e-09!6;UBERON:0004733!3.34e-08!12;UBERON:0002028!3.34e-08!12;UBERON:0007277!3.34e-08!12;UBERON:0004111!3.86e-08!241;UBERON:0000483!4.69e-08!309;UBERON:0000119!7.50e-08!312;UBERON:0000481!8.99e-08!347;UBERON:0000988!9.48e-08!3;UBERON:0000062!1.24e-07!511;UBERON:0006331!1.41e-07!3;UBERON:0001896!2.49e-07!3;UBERON:0005290!2.49e-07!3;UBERON:0010096!2.49e-07!3;UBERON:0000059!2.87e-07!11;UBERON:0002021!3.38e-07!5;UBERON:0002771!7.18e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;5.24e-26;2!UBERON:0000122;5.24e-26;2!UBERON:0002336;3.98e-14;1!UBERON:0011215;3.98e-14;1!UBERON:0001018;3.98e-14;1!UBERON:0002473;3.98e-14;1!UBERON:0005340;3.98e-14;1!UBERON:0003544;3.98e-14;1!UBERON:0005970;3.98e-14;1!UBERON:0002316;3.98e-14;1!UBERON:0001020;3.98e-14;1!UBERON:0002437;3.98e-14;1!UBERON:0002581;1.10e-13;1!UBERON:0002902;1.10e-13;1!UBERON:0000941;1.10e-13;1!UBERON:0001785;1.10e-13;1!UBERON:0002464;1.10e-13;1!UBERON:0004904;1.10e-13;1!UBERON:0001021;1.10e-13;1!UBERON:0009899;1.10e-13;1!UBERON:0002298;3.56e-09;6!UBERON:0004732;3.92e-09;13!UBERON:0001893;1.87e-08;34!UBERON:0001017;9.52e-08;75!UBERON:0001875;1.05e-07;2!UBERON:0006514;1.05e-07;2!UBERON:0003714;1.75e-07;2!UBERON:0006955;1.75e-07;2!UBERON:0004801;1.75e-07;2!UBERON:0000955;2.08e-07;68!UBERON:0000160;9.77e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,3.59e-26,2;UBERON:0000122,3.59e-26,2;UBERON:0002336,3.98e-14,1;UBERON:0011215,3.98e-14,1;UBERON:0001018,3.98e-14,1;UBERON:0002473,3.98e-14,1;UBERON:0005340,3.98e-14,1;UBERON:0003544,3.98e-14,1;UBERON:0005970,3.98e-14,1;UBERON:0002316,3.98e-14,1;UBERON:0001020,3.98e-14,1;UBERON:0002437,3.98e-14,1;UBERON:0000941,7.55e-14,1;UBERON:0001785,7.55e-14,1;UBERON:0002464,7.55e-14,1;UBERON:0004904,7.55e-14,1;UBERON:0001021,7.55e-14,1;UBERON:0003902,7.55e-14,1;UBERON:0005425,7.55e-14,1;UBERON:0002902,9.73e-14,1;UBERON:0009899,9.73e-14,1;UBERON:0002581,1.83e-13,1;UBERON:0001049,3.22e-13,56;UBERON:0005068,3.22e-13,56;UBERON:0006241,3.22e-13,56;UBERON:0007135,3.22e-13,56;UBERON:0001016,2.07e-12,89;UBERON:0007023,6.92e-12,114;UBERON:0001017,3.29e-11,81;UBERON:0003075,3.60e-11,82;UBERON:0007284,3.60e-11,82;UBERON:0000073,9.59e-11,53;UBERON:0002616,9.59e-11,53;UBERON:0000955,1.23e-10,68;UBERON:0006238,1.23e-10,68;UBERON:0002346,1.31e-10,86;UBERON:0002298,3.02e-09,6;UBERON:0004732,3.22e-09,13;UBERON:0011216,4.49e-09,223;UBERON:0001893,6.96e-09,34;UBERON:0010371,1.31e-08,104;UBERON:0003076,4.32e-08,15;UBERON:0003057,4.32e-08,15;UBERON:0001875,1.12e-07,2;UBERON:0006514,1.12e-07,2;UBERON:0003714,1.45e-07,2;UBERON:0002780,2.19e-07,41;UBERON:0001890,2.19e-07,41;UBERON:0003080,2.19e-07,41;UBERON:0006240,2.19e-07,41;UBERON:0006955,2.40e-07,2;UBERON:0004801,2.40e-07,2;UBERON:0003056,6.42e-07,61;UBERON:0000160,9.77e-07,17 | |||
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| ||
|short_description=p7@GAL3ST1 | |||
}} | }} |
Latest revision as of 18:31, 19 September 2015
Short description: | p7@GAL3ST1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GAL3ST1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000402369, ENST00000406361_5end |
EntrezGene: | GAL3ST1 |
HGNC: | 24240 |
UniProt: | Q99999 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell of cervix | 2.40e-07 | 2 |