FFCP PHASE1:Hg19::chr22:43042678..43042692,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:43042678..43042692,- to FFCP PHASE1:Hg19::chr22:43042678..43042692,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1727 | |EntrezGene=1727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2873 | |HGNC=2873 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000466276_5end | |||
|cluster_id=chr22:43042678..43042692,- | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_3_at_CYB5R3_5end | |||
|id=chr22:43042678..43042692,- | |||
|ontology_enrichment_celltype=CL:0002078!8.62e-11!44;CL:0002139!6.72e-10!24;CL:0000115!2.74e-09!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.64e-11;24!CL:0000115;6.86e-09;36!CL:0002078;7.72e-09;45!CL:0002138;3.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,9.22e-12,45;CL:0002139,2.48e-11,24;CL:0000115,1.31e-10,36;CL:0005020,3.25e-08,6;CL:0002138,3.25e-08,6;CL:0005022,3.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.17e-10;82!CL:0005022;3.54e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.34e-61!115;UBERON:0004111!2.23e-27!241;UBERON:0001049!1.14e-23!57;UBERON:0005068!1.14e-23!57;UBERON:0006241!1.14e-23!57;UBERON:0007135!1.14e-23!57;UBERON:0000025!1.21e-23!194;UBERON:0000477!1.08e-22!286;UBERON:0002616!1.93e-20!59;UBERON:0003080!9.70e-19!42;UBERON:0002780!5.60e-18!41;UBERON:0001890!5.60e-18!41;UBERON:0006240!5.60e-18!41;UBERON:0003075!7.49e-18!86;UBERON:0007284!7.49e-18!86;UBERON:0000955!7.54e-18!69;UBERON:0006238!7.54e-18!69;UBERON:0005743!1.92e-16!86;UBERON:0001017!5.57e-16!82;UBERON:0002346!6.03e-16!90;UBERON:0000073!1.34e-14!94;UBERON:0001016!1.34e-14!94;UBERON:0000483!2.27e-14!309;UBERON:0002020!2.72e-14!34;UBERON:0003528!2.72e-14!34;UBERON:0001893!2.79e-14!34;UBERON:0000119!4.94e-14!312;UBERON:0002791!8.93e-14!33;UBERON:0001869!5.04e-13!32;UBERON:0000468!2.82e-12!659;UBERON:0002619!3.25e-12!22;UBERON:0001950!2.56e-11!20;UBERON:0000467!3.21e-11!625;UBERON:0003056!3.28e-11!61;UBERON:0000480!4.54e-11!626;UBERON:0000064!4.90e-11!219;UBERON:0000475!9.02e-10!365;UBERON:0000956!1.03e-09!25;UBERON:0000203!1.03e-09!25;UBERON:0000153!2.58e-09!129;UBERON:0007811!2.58e-09!129;UBERON:0000033!1.33e-08!123;UBERON:0004121!3.75e-08!169;UBERON:0003914!4.21e-08!118;UBERON:0002465!6.39e-08!10;UBERON:0000481!8.38e-08!347;UBERON:0002417!8.72e-08!61;UBERON:0000916!8.72e-08!61;UBERON:0000924!2.07e-07!173;UBERON:0006601!2.07e-07!173;UBERON:0009569!2.23e-07!113;UBERON:0003103!3.09e-07!69;UBERON:0000062!4.01e-07!511;UBERON:0000479!5.78e-07!787;UBERON:0002298!7.23e-07!8;UBERON:0005172!8.22e-07!55;UBERON:0005173!8.22e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.62e-20;114!UBERON:0002780;1.52e-16;41!UBERON:0001890;1.52e-16;41!UBERON:0000073;1.30e-15;53!UBERON:0002616;1.30e-15;53!UBERON:0001893;4.32e-15;34!UBERON:0003528;8.40e-15;34!UBERON:0002020;8.40e-15;34!UBERON:0002791;1.44e-14;32!UBERON:0001869;2.29e-14;32!UBERON:0002619;1.31e-13;22!UBERON:0001950;2.25e-12;20!UBERON:0000956;2.62e-11;25!UBERON:0000203;2.62e-11;25!UBERON:0000955;1.37e-10;68!UBERON:0001017;4.87e-10;75!UBERON:0002465;2.78e-09;10!UBERON:0002420;2.14e-08;9!UBERON:0007245;2.14e-08;9!UBERON:0010009;2.14e-08;9!UBERON:0010011;2.14e-08;9!UBERON:0000454;2.14e-08;9!UBERON:0000125;3.34e-08;9!UBERON:0002308;3.34e-08;9!UBERON:0001016;6.28e-08;83!UBERON:0001473;1.63e-07;8!UBERON:0004536;1.63e-07;8!UBERON:0006558;1.63e-07;8!UBERON:0004732;5.71e-07;13!UBERON:0002298;6.36e-07;6!UBERON:0001894;7.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.17e-74,114;UBERON:0001049,7.02e-30,56;UBERON:0005068,7.02e-30,56;UBERON:0006241,7.02e-30,56;UBERON:0007135,7.02e-30,56;UBERON:0000073,8.41e-28,53;UBERON:0002616,8.41e-28,53;UBERON:0004111,1.93e-24,240;UBERON:0002780,5.59e-23,41;UBERON:0001890,5.59e-23,41;UBERON:0003080,5.59e-23,41;UBERON:0006240,5.59e-23,41;UBERON:0003075,2.40e-22,82;UBERON:0007284,2.40e-22,82;UBERON:0000955,3.49e-22,68;UBERON:0006238,3.49e-22,68;UBERON:0001017,2.21e-21,81;UBERON:0000025,6.00e-21,192;UBERON:0002346,1.71e-20,86;UBERON:0001016,9.63e-19,89;UBERON:0003528,9.36e-18,34;UBERON:0002020,9.36e-18,34;UBERON:0001893,9.66e-18,34;UBERON:0002791,3.28e-16,32;UBERON:0010314,4.54e-16,132;UBERON:0001869,5.55e-16,32;UBERON:0010371,1.78e-15,104;UBERON:0003056,7.68e-15,61;UBERON:0002619,1.21e-13,22;UBERON:0001950,2.28e-12,20;UBERON:0011216,2.02e-11,223;UBERON:0000956,2.44e-11,25;UBERON:0000203,2.44e-11,25;UBERON:0000483,5.27e-11,306;UBERON:0000119,1.23e-10,309;UBERON:0004121,1.59e-10,171;UBERON:0000924,1.59e-10,171;UBERON:0006601,1.59e-10,171;UBERON:0002465,2.75e-09,10;UBERON:0002420,1.90e-08,9;UBERON:0007245,1.90e-08,9;UBERON:0010009,1.90e-08,9;UBERON:0010011,1.90e-08,9;UBERON:0000454,1.90e-08,9;UBERON:0000125,2.53e-08,9;UBERON:0002308,2.53e-08,9;UBERON:0003076,4.77e-08,15;UBERON:0003057,4.77e-08,15;UBERON:0001473,1.51e-07,8;UBERON:0004536,1.51e-07,8;UBERON:0006558,1.51e-07,8;UBERON:0005423,2.58e-07,581;UBERON:0000922,3.35e-07,592;UBERON:0003103,3.37e-07,68;UBERON:0005631,3.61e-07,14;UBERON:0000158,3.61e-07,14;UBERON:0004732,4.47e-07,13;UBERON:0002298,5.20e-07,6;UBERON:0001894,6.93e-07,7;UBERON:0006222,6.93e-07,7 | |||
|phase1_expression=4.1786027232228,0.856402095563933,2.96004248601539,3.00219895059391,0,3.48935409640147,0,0,0,2.94880723801811,14.653824527421,1.96597234917155,2.11013582582763,0.123766352960047,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.821005894499457,0.708397031823113,0.393364276848904,0.383829398097213,0.464448369948228,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0.670700859703636,2.04580098949649,0,0.50133791063589,0.579386075843295,0,0.486634870302636,0,0,0,4.58426764241994,0.364295288292542,0.370784442784429,1.29818957461873,0.870648686496336,0.531831842075461,0,0,0,2.38514888840046,1.72046919021225,2.42998351125316,0.56530794192401,3.35599548967925,1.10047216776027,1.04497483268405,5.94358546089456,7.1153252537342,30.7942963743497,52.7706405412983,48.6574147659848,119.346346141055,3.67663080345869,1.62028389576352,0.625098097988558,0.22452937262617,1.12611480483322,0,1.89853131913626,0,0,0,0.872188104285069,0.496971951695318,0.506522046658319,0,0,0,1.12135520028461,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0.756787138224657,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,4.55080680969013,0.718618141816238,0,0,0,0,0,0,0.340296549480063,0.358779271377724,0,0.211931901159562,0.900273288253207,0.309157587715317,0.257640540045629,0.558350568994769,0,0.68205903612839,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,2.95262181849859,2.80483547606892,1.6462960453256,1.47008711385542,0,0.982827216677626,1.18157981336281,0,0.368965315629341,0,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0,0,64.3874357014389,44.9095947199312,110.537662448302,0,0,0,0,0,0,0,0,0,0,1.15014803749563,0,0,0,0.288239906833923,0.12624243342638,0,0,0,3.4214489204541,0,0,0,0.112131084345361,0,0,0,3.57656445851882,0.845302752556,0,0,0,0,0,3.43147184779554,2.17048642156577,0,0,3.55391948742546,0,0,0.871533458600294,0.99972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0.788123040807709,0,0.385029108839245,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0.391602314925481,0,0.413536052245775,0,0.106727557803444,5.15316871458641,8.32177197552485,2.41912234663744,2.23297027036899,2.91577749247319,3.08726103876381,4.48487022394953,0.511707249066704,0.64341568457443,17.8101679733989,0,0,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0.368323955743585,0,0,0.262248829918848,0.451199612907412,0.539107359730903,1.56869953835371,0,0.422206515571503,3.4120015221269,0.680374821106063,0.647747748306418,20.0495428497376,0.270946437543853,1.00337954770971,4.33289664176565,4.98645605357235,0.447749509444357,0,0.261435451024901,0.256450125116389,1.31205858279882,0,4.01859945426117,0.0915694648183434,0,0,0,4.82051789532479,0,0.154048617114644,0,0,0,0.145016693914229,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0.6970372701606,0,1.59691809095107,0,0.37064843820784,0,0,0,1.5250415513906,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,1.21856744815642,0,0,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0.30982349809975,0,0.143411352204052,0.392996164052485,0,0,1.05553817648832,0.658589785919804,0,0,0.0962221127255121,0,0,5.27205284349963,0,0,0.443430153536676,0.459446800413919,0.507447609232169,0.764637207142375,0.569647187174163,0.476463550915578,0.822724546172388,0,1.08006287447623,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0.635020748171649,0,0,0,0,0,10.8346737793026,0,0,0,0,0,0,0,0,0,0,9.19549306818343,0,0,0,18.6065387675305,0,0,0,28.6493381685228,2.07875276582847,36.8592842519079,7.95318118213038,5.20476840718897,0,0,0,7.96991953004279,3.31540698637377,0.251932747854276,0,0,0.311039587661807,0.0898683511473268,0,0,7.59554223404389,0,1.11136990144637,6.78532922266653,3.15411533750294,1.99613798001194,0,0,22.4749868384786,0,0.254253650292766,0,0,0,0,3.54296554325536,2.41192877250816,3.05163472634166,4.97606669690511,3.84211904639612,4.8264787373874,0,0,5.77126938778478,1.13942055847001,0,0,0,9.57003479195758,0.0915975934018623,9.06159119231679,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0.995261931078505,5.66128412821371,1.83309043480088,0,0,0,5.79649743633823,10.4335094148843,4.68528891450678,0,0,0,20.5183889481683,8.46935012340647,0.30607276163049,6.19228480359182,0,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0,5.59125338374496,0,0,0,0,5.23740689037465,0,4.97157629717171,0,0,4.43175571691151,0.195551382734803,0,8.1112138000954,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,5.4037825983881,6.98217432349165,0,5.15718529703949,0,16.1983792737907,8.24977526442061,13.6395874669595,6.98876501746469,11.1598772515508,10.9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| ||
|short_description=p3@CYB5R3 | |||
}} | }} |
Latest revision as of 00:36, 25 September 2015
Short description: | p3@CYB5R3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CYB5R3_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | 0bp_to_ENST00000466276_5end |
EntrezGene: | CYB5R3 |
HGNC: | 2873 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 9.22e-12 | 45 |
endothelial cell of vascular tree | 2.48e-11 | 24 |
endothelial cell | 1.31e-10 | 36 |
lymphangioblast | 3.25e-08 | 6 |
endothelial cell of lymphatic vessel | 3.25e-08 | 6 |
vascular lymphangioblast | 3.25e-08 | 6 |