FFCP PHASE1:Hg19::chr3:147130303..147130313,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:147130303..147130313,+ to FFCP PHASE1:Hg19::chr3:147130303..147130313,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:147130303..147130313,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr3:147130303..147130313,+ | |||
|id=chr3:147130303..147130313,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.39e-11!25;CL:0000243!1.53e-11!15;CL:0000125!1.53e-11!15;CL:0000030!1.53e-11!15;CL:0000339!1.53e-11!15;CL:0000095!5.67e-10!17;CL:0000123!5.67e-10!17;CL:0000133!7.38e-08!59;CL:0000128!3.31e-07!7;CL:0000126!3.31e-07!7;CL:0000127!3.31e-07!7;CL:0002453!3.31e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000708;6.14e-18;3!CL:0000064;1.73e-17;3!CL:0000067;1.73e-17;3!CL:0005012;1.73e-17;3!CL:0002304;1.73e-17;3!CL:0002575;4.82e-13;2!CL:0002549;1.39e-12;2!CL:0000075;5.62e-07;27!CL:0000669;6.22e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,4.49e-18,3;CL:0000064,1.69e-17,3;CL:0000067,1.69e-17,3;CL:0005012,1.69e-17,3;CL:0002304,1.69e-17,3;CL:0002575,5.29e-13,2;CL:0002549,1.21e-12,2;CL:0000075,5.96e-07,27;CL:0000669,6.51e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.31e-19;3!UBERON:0006241;1.12e-08;3!UBERON:0003057;1.12e-08;3!UBERON:0010115;5.94e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.33e-58!82;UBERON:0005743!5.40e-57!86;UBERON:0000073!2.82e-53!94;UBERON:0001016!2.82e-53!94;UBERON:0000955!1.01e-52!69;UBERON:0006238!1.01e-52!69;UBERON:0002616!4.77e-44!59;UBERON:0001049!2.45e-39!57;UBERON:0005068!2.45e-39!57;UBERON:0006241!2.45e-39!57;UBERON:0007135!2.45e-39!57;UBERON:0003075!2.14e-38!86;UBERON:0007284!2.14e-38!86;UBERON:0002346!6.48e-36!90;UBERON:0000033!2.29e-35!123;UBERON:0004121!1.64e-34!169;UBERON:0000153!4.80e-34!129;UBERON:0007811!4.80e-34!129;UBERON:0000924!3.52e-33!173;UBERON:0006601!3.52e-33!173;UBERON:0002780!2.16e-25!41;UBERON:0001890!2.16e-25!41;UBERON:0006240!2.16e-25!41;UBERON:0001893!3.05e-25!34;UBERON:0002020!3.56e-25!34;UBERON:0003528!3.56e-25!34;UBERON:0003080!1.43e-24!42;UBERON:0003056!1.66e-24!61;UBERON:0002791!2.44e-24!33;UBERON:0001869!5.56e-23!32;UBERON:0000956!3.75e-17!25;UBERON:0000203!3.75e-17!25;UBERON:0003076!2.18e-16!15;UBERON:0003057!2.18e-16!15;UBERON:0004733!8.86e-15!12;UBERON:0002028!8.86e-15!12;UBERON:0007277!8.86e-15!12;UBERON:0000475!4.34e-14!365;UBERON:0002619!5.05e-14!22;UBERON:0004732!2.12e-13!13;UBERON:0007023!1.34e-12!115;UBERON:0001950!1.43e-11!20;UBERON:0002200!4.02e-11!11;UBERON:0006876!4.02e-11!11;UBERON:0002680!7.20e-11!9;UBERON:0001895!7.20e-11!9;UBERON:0010092!7.20e-11!9;UBERON:0002308!1.18e-09!9;UBERON:0000125!1.18e-09!9;UBERON:0002298!1.40e-08!8;UBERON:0005284!1.52e-08!5;UBERON:0000200!6.32e-08!6;UBERON:0002420!9.49e-08!9;UBERON:0007245!9.49e-08!9;UBERON:0010009!9.49e-08!9;UBERON:0010011!9.49e-08!9;UBERON:0000454!9.49e-08!9;UBERON:0009663!1.04e-07!7;UBERON:0002037!1.20e-07!6;UBERON:0006215!1.20e-07!6;UBERON:0000488!3.16e-07!4;UBERON:0000119!4.66e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;2.57e-18;11!UBERON:0003210;6.14e-18;3!UBERON:0001778;1.73e-17;3!UBERON:0001775;1.73e-17;3!UBERON:0000488;2.94e-13;4!UBERON:0007625;1.25e-12;11!UBERON:0005629;1.39e-12;2!UBERON:0005358;1.39e-12;2!UBERON:0001886;1.39e-12;2!UBERON:0004086;1.39e-12;2!UBERON:0005282;1.39e-12;2!UBERON:0005281;1.39e-12;2!UBERON:0004733;3.05e-12;12!UBERON:0002028;3.05e-12;12!UBERON:0004732;2.79e-11;13!UBERON:0001017;3.07e-11;75!UBERON:0005284;3.54e-11;5!UBERON:0001016;9.02e-11;83!UBERON:0001801;7.01e-10;14!UBERON:0002037;7.61e-10;6!UBERON:0002203;5.25e-09;6!UBERON:0001768;5.25e-09;6!UBERON:0002200;5.25e-09;6!UBERON:0000955;5.69e-09;68!UBERON:0002240;1.12e-08;3!UBERON:0005174;1.12e-08;3!UBERON:0001137;1.12e-08;3!UBERON:0001896;1.88e-08;3!UBERON:0005290;1.88e-08;3!UBERON:0010371;5.11e-08;31!UBERON:0000019;3.21e-07;19!UBERON:0000047;3.21e-07;19!UBERON:0004088;3.21e-07;19!UBERON:0010230;3.21e-07;19!UBERON:0002363;5.94e-07;1!UBERON:0003112;5.94e-07;1!UBERON:0011158;5.94e-07;1!UBERON:0003128;5.94e-07;1!UBERON:0001703;5.94e-07;1!UBERON:0002241;5.94e-07;1!UBERON:0000970;7.58e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-18,81;UBERON:0003076,1.66e-18,15;UBERON:0003057,1.66e-18,15;UBERON:0006876,2.32e-18,11;UBERON:0003210,4.49e-18,3;UBERON:0001778,1.69e-17,3;UBERON:0001775,1.69e-17,3;UBERON:0001016,1.66e-16,89;UBERON:0004121,1.50e-15,171;UBERON:0000924,1.50e-15,171;UBERON:0006601,1.50e-15,171;UBERON:0003075,2.87e-14,82;UBERON:0007284,2.87e-14,82;UBERON:0010371,6.98e-14,104;UBERON:0002346,1.85e-13,86;UBERON:0000955,2.65e-13,68;UBERON:0006238,2.65e-13,68;UBERON:0000488,2.89e-13,4;UBERON:0007625,1.12e-12,11;UBERON:0005629,1.21e-12,2;UBERON:0005358,1.21e-12,2;UBERON:0001886,1.21e-12,2;UBERON:0004086,1.21e-12,2;UBERON:0005282,1.21e-12,2;UBERON:0005281,1.21e-12,2;UBERON:0004733,3.44e-12,12;UBERON:0002028,3.44e-12,12;UBERON:0007277,3.44e-12,12;UBERON:0010314,1.90e-11,132;UBERON:0004732,3.12e-11,13;UBERON:0005284,3.20e-11,5;UBERON:0001049,3.39e-10,56;UBERON:0005068,3.39e-10,56;UBERON:0006241,3.39e-10,56;UBERON:0007135,3.39e-10,56;UBERON:0001801,6.44e-10,14;UBERON:0002037,7.63e-10,6;UBERON:0006215,7.63e-10,6;UBERON:0002203,5.19e-09,6;UBERON:0001768,5.19e-09,6;UBERON:0002200,5.19e-09,6;UBERON:0002240,7.20e-09,3;UBERON:0005174,7.20e-09,3;UBERON:0001137,7.20e-09,3;UBERON:0001896,2.28e-08,3;UBERON:0005290,2.28e-08,3;UBERON:0010096,2.28e-08,3;UBERON:0005085,3.33e-08,31;UBERON:0000073,3.68e-07,53;UBERON:0002616,3.68e-07,53;UBERON:0000019,7.16e-07,20;UBERON:0000047,7.16e-07,20;UBERON:0010312,7.16e-07,20;UBERON:0004088,7.16e-07,20;UBERON:0010230,7.16e-07,20;UBERON:0003072,7.16e-07,20;UBERON:0004128,7.16e-07,20;UBERON:0003071,7.16e-07,20;UBERON:0003112,7.73e-07,1;UBERON:0011158,7.73e-07,1;UBERON:0003128,7.73e-07,1;UBERON:0001703,7.73e-07,1;UBERON:0002241,7.73e-07,1;UBERON:0004761,7.73e-07,1;UBERON:0009617,7.73e-07,1 | |||
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|short_description=p@chr3:147130303..147130313,+ | |||
}} | }} |
Latest revision as of 16:45, 29 July 2015
Short description: | p@chr3:147130303..147130313, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:147130303..147130313, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 4.49e-18 | 3 |
ciliated cell | 1.69e-17 | 3 |
ciliated epithelial cell | 1.69e-17 | 3 |
multi-ciliated epithelial cell | 1.69e-17 | 3 |
non-pigmented ciliary epithelial cell | 1.69e-17 | 3 |
central nervous system pericyte | 5.29e-13 | 2 |
fibroblast of choroid plexus | 1.21e-12 | 2 |
columnar/cuboidal epithelial cell | 5.96e-07 | 27 |
pericyte cell | 6.51e-07 | 4 |