FFCP PHASE1:Hg19::chr4:160188971..160188982,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:160188971..160188982,+ to FFCP PHASE1:Hg19::chr4:160188971..160188982,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9693 | |EntrezGene=9693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16854 | |HGNC=16854 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y4G8 | |UniProt=Q9Y4G8 | ||
|association_with_transcript=-15bp_to_NM_014247,uc003iqg.3_5end | |||
|cluster_id=chr4:160188971..160188982,+ | |||
|description=CAGE_peak_19_at_RAPGEF2_5end | |||
|id=chr4:160188971..160188982,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.15e-08;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.72e-60!57;UBERON:0005068!8.72e-60!57;UBERON:0006241!8.72e-60!57;UBERON:0007135!8.72e-60!57;UBERON:0003075!2.10e-55!86;UBERON:0007284!2.10e-55!86;UBERON:0002346!3.79e-52!90;UBERON:0002616!7.22e-52!59;UBERON:0000073!1.46e-47!94;UBERON:0001016!1.46e-47!94;UBERON:0005743!1.67e-47!86;UBERON:0001017!2.31e-46!82;UBERON:0002780!2.40e-46!41;UBERON:0001890!2.40e-46!41;UBERON:0006240!2.40e-46!41;UBERON:0000955!7.40e-46!69;UBERON:0006238!7.40e-46!69;UBERON:0003080!5.49e-45!42;UBERON:0003056!5.50e-43!61;UBERON:0002020!8.11e-41!34;UBERON:0003528!8.11e-41!34;UBERON:0001893!8.36e-41!34;UBERON:0002791!4.11e-39!33;UBERON:0001869!2.40e-37!32;UBERON:0000033!4.06e-33!123;UBERON:0000153!5.53e-32!129;UBERON:0007811!5.53e-32!129;UBERON:0007023!1.06e-31!115;UBERON:0004121!1.29e-31!169;UBERON:0000924!1.97e-30!173;UBERON:0006601!1.97e-30!173;UBERON:0000956!1.35e-26!25;UBERON:0000203!1.35e-26!25;UBERON:0002619!3.71e-25!22;UBERON:0001950!5.99e-22!20;UBERON:0002308!4.85e-16!9;UBERON:0000125!4.85e-16!9;UBERON:0003076!2.57e-15!15;UBERON:0003057!2.57e-15!15;UBERON:0000025!5.80e-14!194;UBERON:0004733!1.03e-13!12;UBERON:0002028!1.03e-13!12;UBERON:0007277!1.03e-13!12;UBERON:0009663!1.66e-12!7;UBERON:0002420!1.79e-12!9;UBERON:0007245!1.79e-12!9;UBERON:0010009!1.79e-12!9;UBERON:0010011!1.79e-12!9;UBERON:0000454!1.79e-12!9;UBERON:0004732!1.83e-12!13;UBERON:0000064!2.39e-12!219;UBERON:0001871!1.11e-11!7;UBERON:0000483!1.34e-11!309;UBERON:0000119!2.61e-11!312;UBERON:0002298!5.84e-11!8;UBERON:0000477!1.07e-10!286;UBERON:0004111!3.85e-10!241;UBERON:0002680!2.14e-09!9;UBERON:0001895!2.14e-09!9;UBERON:0010092!2.14e-09!9;UBERON:0000475!3.96e-09!365;UBERON:0000200!2.27e-08!6;UBERON:0000369!7.42e-08!4;UBERON:0002435!7.42e-08!4;UBERON:0000204!7.42e-08!4;UBERON:0010082!7.42e-08!4;UBERON:0001894!5.42e-07!7;UBERON:0006222!5.42e-07!7;UBERON:0006331!7.12e-07!3;UBERON:0002771!7.12e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002148;3.93e-29;2!UBERON:0006331;3.93e-29;2!UBERON:0009662;3.93e-29;2!UBERON:0002298;8.89e-22;6!UBERON:0000988;8.65e-20;3!UBERON:0004733;2.94e-19;12!UBERON:0002028;2.94e-19;12!UBERON:0004732;8.34e-18;13!UBERON:0002336;1.78e-15;1!UBERON:0011215;1.78e-15;1!UBERON:0001018;1.78e-15;1!UBERON:0002473;1.78e-15;1!UBERON:0005340;1.78e-15;1!UBERON:0003544;1.78e-15;1!UBERON:0005970;1.78e-15;1!UBERON:0002316;1.78e-15;1!UBERON:0001020;1.78e-15;1!UBERON:0002437;1.78e-15;1!UBERON:0002680;6.84e-15;9!UBERON:0001895;6.84e-15;9!UBERON:0000073;1.69e-10;53!UBERON:0002616;1.69e-10;53!UBERON:0001017;6.87e-10;75!UBERON:0001871;3.88e-09;6!UBERON:0002771;2.15e-08;2!UBERON:0001905;2.15e-08;2!UBERON:0005162;2.15e-08;2!UBERON:0000122;2.15e-08;2!UBERON:0002757;2.15e-08;2!UBERON:0010134;2.15e-08;2!UBERON:0005408;2.15e-08;2!UBERON:0001899;2.15e-08;2!UBERON:0000955;3.49e-08;68!UBERON:0003528;1.03e-07;34!UBERON:0002020;1.03e-07;34!UBERON:0001016;1.63e-07;83!UBERON:0000125;3.24e-07;9!UBERON:0002308;3.24e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002148,1.43e-28,2;UBERON:0006331,1.43e-28,2;UBERON:0009662,1.43e-28,2;UBERON:0002298,1.81e-21,6;UBERON:0000073,2.35e-20,53;UBERON:0002616,2.35e-20,53;UBERON:0001017,1.76e-19,81;UBERON:0000988,2.04e-19,3;UBERON:0001049,3.05e-19,56;UBERON:0005068,3.05e-19,56;UBERON:0006241,3.05e-19,56;UBERON:0007135,3.05e-19,56;UBERON:0000955,3.57e-19,68;UBERON:0006238,3.57e-19,68;UBERON:0004733,4.72e-19,12;UBERON:0002028,4.72e-19,12;UBERON:0007277,4.72e-19,12;UBERON:0004732,1.29e-17,13;UBERON:0001016,1.81e-17,89;UBERON:0002336,1.16e-15,1;UBERON:0011215,1.16e-15,1;UBERON:0001018,1.16e-15,1;UBERON:0002473,1.16e-15,1;UBERON:0005340,1.16e-15,1;UBERON:0003544,1.16e-15,1;UBERON:0005970,1.16e-15,1;UBERON:0002316,1.16e-15,1;UBERON:0001020,1.16e-15,1;UBERON:0002437,1.16e-15,1;UBERON:0003076,2.58e-15,15;UBERON:0003057,2.58e-15,15;UBERON:0002680,1.05e-14,9;UBERON:0001895,1.05e-14,9;UBERON:0010092,1.05e-14,9;UBERON:0003075,5.96e-13,82;UBERON:0007284,5.96e-13,82;UBERON:0002346,2.58e-12,86;UBERON:0003528,4.12e-10,34;UBERON:0002020,4.12e-10,34;UBERON:0010371,4.76e-10,104;UBERON:0011216,3.05e-09,223;UBERON:0001871,3.30e-09,6;UBERON:0007023,3.82e-09,114;UBERON:0004121,1.13e-08,171;UBERON:0000924,1.13e-08,171;UBERON:0006601,1.13e-08,171;UBERON:0002771,1.61e-08,2;UBERON:0005162,1.73e-08,2;UBERON:0000122,1.73e-08,2;UBERON:0002780,1.75e-08,41;UBERON:0001890,1.75e-08,41;UBERON:0003080,1.75e-08,41;UBERON:0006240,1.75e-08,41;UBERON:0001905,2.67e-08,2;UBERON:0002757,2.67e-08,2;UBERON:0010134,2.67e-08,2;UBERON:0005408,2.67e-08,2;UBERON:0001899,2.67e-08,2;UBERON:0010314,9.85e-08,132;UBERON:0000025,1.01e-07,192;UBERON:0000125,4.28e-07,9;UBERON:0002308,4.28e-07,9;UBERON:0001893,8.02e-07,34;UBERON:0001950,9.87e-07,20 | |||
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| ||
|short_description=p19@RAPGEF2 | |||
}} | }} |
Latest revision as of 12:29, 16 September 2015
Short description: | p19@RAPGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_RAPGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_NM_014247, uc003iqg.3_5end |
EntrezGene: | RAPGEF2 |
HGNC: | 16854 |
UniProt: | Q9Y4G8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data