FFCP PHASE1:Hg19::chrX:107683009..107683088,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:107683009..107683088,+ to FFCP PHASE1:Hg19::chrX:107683009..107683088,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1287 | |EntrezGene=1287 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2207 | |HGNC=2207 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477429_5end | |||
|cluster_id=chrX:107683009..107683088,+ | |||
|coexpression_cluster_id=C4843 | |||
|description=CAGE_peak_1_at_COL4A5_5end | |||
|id=chrX:107683009..107683088,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.80e-15!254;CL:0002321!7.25e-15!248;CL:0000220!1.84e-14!246;CL:0000222!2.12e-09!119;CL:0000183!5.53e-09!59;CL:0000192!6.34e-08!42;CL:0000514!6.34e-08!42;CL:0000187!1.10e-07!54;CL:0000680!1.25e-07!57;CL:0000056!1.25e-07!57;CL:0000355!1.25e-07!57;CL:0000393!2.40e-07!60;CL:0000211!2.40e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.39e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.56e-14,250;CL:0000066,3.03e-14,253;CL:0000222,3.07e-09,121;CL:0000349,4.10e-08,19;CL:0000192,4.55e-08,43;CL:0000514,4.55e-08,43;CL:0000187,7.53e-08,55;CL:0000680,8.46e-08,58;CL:0000056,8.46e-08,58;CL:0000355,8.46e-08,58;CL:0000393,2.49e-07,61;CL:0000211,2.49e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.33e-26!347;UBERON:0000119!1.42e-23!312;UBERON:0000483!3.06e-23!309;UBERON:0000477!1.79e-21!286;UBERON:0000468!1.36e-18!659;UBERON:0000922!3.07e-17!612;UBERON:0004111!9.69e-17!241;UBERON:0003104!3.29e-15!238;UBERON:0009142!3.29e-15!238;UBERON:0000467!3.78e-15!625;UBERON:0000480!4.23e-15!626;UBERON:0000475!6.53e-15!365;UBERON:0002050!6.71e-15!605;UBERON:0005423!6.71e-15!605;UBERON:0000923!1.88e-14!604;UBERON:0005291!1.88e-14!604;UBERON:0006598!1.88e-14!604;UBERON:0002532!1.88e-14!604;UBERON:0005256!4.04e-14!143;UBERON:0004119!4.89e-13!169;UBERON:0000925!4.89e-13!169;UBERON:0006595!4.89e-13!169;UBERON:0000064!6.37e-13!219;UBERON:0000490!9.95e-12!138;UBERON:0001048!3.78e-11!168;UBERON:0000025!3.87e-11!194;UBERON:0002049!3.56e-10!79;UBERON:0007798!3.56e-10!79;UBERON:0002100!4.07e-10!216;UBERON:0003914!6.60e-10!118;UBERON:0001007!1.54e-09!155;UBERON:0001555!1.54e-09!155;UBERON:0007026!1.54e-09!155;UBERON:0000486!2.30e-09!82;UBERON:0000062!3.00e-09!511;UBERON:0004872!1.99e-08!84;UBERON:0002385!2.75e-08!63;UBERON:0001015!2.75e-08!63;UBERON:0000383!2.75e-08!63;UBERON:0005156!4.78e-08!59;UBERON:0000990!4.78e-08!59;UBERON:0001134!6.34e-08!61;UBERON:0002036!6.34e-08!61;UBERON:0003082!6.34e-08!61;UBERON:0004921!6.54e-08!129;UBERON:0004185!6.54e-08!129;UBERON:0002530!1.33e-07!59;UBERON:0000478!1.62e-07!24;UBERON:0000914!2.88e-07!83;UBERON:0002329!2.88e-07!83;UBERON:0003077!2.88e-07!83;UBERON:0003059!2.88e-07!83;UBERON:0007282!2.88e-07!83;UBERON:0009618!2.88e-07!83;UBERON:0007285!2.88e-07!83;UBERON:0004290!3.78e-07!70;UBERON:0004121!7.06e-07!169;UBERON:0000055!7.35e-07!69;UBERON:0000466!8.80e-07!126;UBERON:0003133!8.93e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.19e-07;24 | |||
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| ||
|short_description=p1@COL4A5 | |||
}} | }} |
Latest revision as of 23:35, 18 September 2015
Short description: | p1@COL4A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL4A5_5end |
Coexpression cluster: | C4843_Small_amniotic_uterus_Amniotic_smooth_Mesenchymal_salivary |
Association with transcript: | 0bp_to_ENST00000477429_5end |
EntrezGene: | COL4A5 |
HGNC: | 2207 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.56e-14 | 250 |
epithelial cell | 3.03e-14 | 253 |
mesodermal cell | 3.07e-09 | 121 |
extraembryonic cell | 4.10e-08 | 19 |
smooth muscle cell | 4.55e-08 | 43 |
smooth muscle myoblast | 4.55e-08 | 43 |
muscle cell | 7.53e-08 | 55 |
muscle precursor cell | 8.46e-08 | 58 |
myoblast | 8.46e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.46e-08 | 58 |
electrically responsive cell | 2.49e-07 | 61 |
electrically active cell | 2.49e-07 | 61 |