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(Created page with "{{f5samples |id=FF:11521-119H9 |name=Hepatic Sinusoidal Endothelial Cells, donor1 |sample_id=11521 |rna_tube_id=119H9 |rna_box=119 |rna_position=H9 |sample_cell_lot=N/A...")
 
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{{f5samples
{{f5samples
|id=FF:11521-119H9
|DRA_sample_Accession=CAGE@SAMD00004997
|name=Hepatic Sinusoidal Endothelial Cells, donor1
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004997
|sample_id=11521
|accession_numbers=CAGE;DRX008301;DRR009173;DRZ000598;DRZ001983;DRZ011948;DRZ013333
|rna_tube_id=119H9
|accession_numbers_RNASeq=sRNA-Seq;DRX037229;DRR041595;DRZ007237
|rna_box=119
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002107,UBERON:0002100,UBERON:0000483,UBERON:0000479,UBERON:0001007,UBERON:0000055,UBERON:0001281,UBERON:0000064,UBERON:0004119,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0004120,UBERON:0000077,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0005911,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0009569,UBERON:0002368,UBERON:0000353,UBERON:0003497,UBERON:0003909,UBERON:0005177,UBERON:0002365,UBERON:0007500,UBERON:0001981,UBERON:0005172,UBERON:0006925,UBERON:0002049,UBERON:0002530,UBERON:0003835,UBERON:0003513,UBERON:0010317,UBERON:0007798,UBERON:0005173,UBERON:0004535,UBERON:0002417,UBERON:0000949,UBERON:0001280,UBERON:0004647,UBERON:0002330,UBERON:0004537,UBERON:0000916,UBERON:0002423,UBERON:0001009
|rna_position=H9
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000213,CL:0002078,CL:0000181,CL:0000417,CL:0000668,CL:0000215,CL:0000412,CL:0000255,CL:0000115,CL:0000182,CL:0002262,CL:1000398
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Sciencell/3H
|rna_lot_number=lot:1253
|rna_catalog_number=SC5005
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=liver
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=9.70000
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=hepatic sinusoidal endothelial cell
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10.00000
|rna_concentration=1.41000
|sample_note=
|profile_hcage=CNhs12075,LSID838,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10014,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000115,CL:0000144,CL:0000213,CL:0000215,CL:0000220,CL:0000222,CL:0000255,CL:0000548,CL:0002078,CL:0002262,CL:0002321,CL:0002371,CL:1000398
|ancestors_in_anatomy_facet=UBERON:0000015,UBERON:0000025,UBERON:0000055,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000077,UBERON:0000119,UBERON:0000353,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0000949,UBERON:0001007,UBERON:0001009,UBERON:0001041,UBERON:0001048,UBERON:0001062,UBERON:0001280,UBERON:0001281,UBERON:0001555,UBERON:0001981,UBERON:0002049,UBERON:0002050,UBERON:0002100,UBERON:0002107,UBERON:0002330,UBERON:0002365,UBERON:0002368,UBERON:0002405,UBERON:0002417,UBERON:0002423,UBERON:0002530,UBERON:0002532,UBERON:0003081,UBERON:0003104,UBERON:0003497,UBERON:0003513,UBERON:0003835,UBERON:0003894,UBERON:0003909,UBERON:0003914,UBERON:0004111,UBERON:0004119,UBERON:0004120,UBERON:0004161,UBERON:0004185,UBERON:0004535,UBERON:0004537,UBERON:0004647,UBERON:0004872,UBERON:0004921,UBERON:0005057,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005256,UBERON:0005423,UBERON:0005911,UBERON:0006235,UBERON:0006925,UBERON:0006965,UBERON:0007026,UBERON:0007500,UBERON:0007798,UBERON:0008835,UBERON:0008836,UBERON:0009142
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000076
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr20:62680984..62680999,-!p1@SOX18!2.83!888.00!SOX18;;chr8:10588010..10588030,-!p1@SOX7!2.07!116.63!SOX7;;chr21:39870339..39870443,-!p1@ERG!1.90!78.98!ERG;;chr8:55370487..55370503,+!p1@SOX17!1.86!70.86!SOX17;;chr10:94449703..94449718,+!p1@HHEX!1.67!170.51!HHEX;;chr17:6926362..6926377,+!p1@BCL6B!1.65!43.55!BCL6B;;chr12:96588368..96588394,+!p3@ELK3!1.63!109.25!ELK3;;chr5:71803177..71803255,-!p1@ZNF366!1.52!32.48!ZNF366;;chr7:149470641..149470694,-!p1@ZNF467!1.37!98.17!ZNF467;;chr9:124991204..124991246,-!p1@LHX6!1.29!18.45!LHX6;;chr8:11561684..11561751,+!p1@GATA4!1.25!16.98!GATA4;;chr19:13213511..13213545,-!p2@LYL1!1.24!17.72!LYL1;;chr2:46524537..46524553,+!p1@EPAS1!1.23!1530.93!EPAS1;;chr20:42543441..42543497,+!p1@TOX2!1.19!64.96!TOX2;;chr17:46675420..46675465,-!p3@HOXB6!1.18!16.24!HOXB6;;chr18:53068911..53068935,-!p4@TCF4!1.17!15.50!TCF4;;chr17:46655672..46655697,-!p3@HOXB4!1.15!13.29!HOXB4;;chr17:46671108..46671147,-!p1@HOXB5!1.11!11.81!HOXB5;;chr15:96873984..96873999,+!p3@NR2F2!1.09!84.15!NR2F2;;chr20:42543506..42543549,+!p2@TOX2!1.09!27.31!TOX2;;chr18:22932080..22932170,-!p1@ZNF521!1.08!47.24!ZNF521;;chr19:13213399..13213414,-!p6@LYL1!1.08!11.07!LYL1;;chr19:46801639..46801699,+!p1@HIF3A!1.08!11.07!HIF3A;;chr10:94449675..94449694,+!p2@HHEX!1.05!28.05!HHEX;;chr15:37390850..37390909,-!p3@MEIS2!1.04!19.93!MEIS2;;chr16:79633894..79633954,-!p3@MAF!1.04!19.19!MAF;;chr1:6479968..6479986,-!p1@HES2!1.03!9.60!HES2;;chr19:46800289..46800327,+!p2@HIF3A!0.99!8.86!HIF3A;;chr1:200008734..200008765,+!p2@NR5A2!0.99!8.86!NR5A2;;chr2:177053386..177053402,+!p1@HOXD1!0.99!8.86!HOXD1;;chr13:41240717..41240735,-!p2@FOXO1!0.98!59.79!FOXO1;;chr15:37392616..37392638,-!p2@MEIS2!0.96!25.84!MEIS2;;chr15:96873921..96873946,+!p1@NR2F2!0.95!232.52!NR2F2;;chr2:46602879..46602899,+!p8@EPAS1!0.95!9.60!EPAS1;;chr20:62462566..62462631,-!p1@ZBTB46!0.94!14.76!ZBTB46;;chr9:14314131..14314147,-!p2@NFIB!0.92!42.07!NFIB;;chr13:72441315..72441454,-!p1@DACH1!0.91!14.76!DACH1;;chr14:35873101..35873119,-!p6@NFKBIA!0.91!9.60!NFKBIA;;chr20:50721803..50721857,-!p2@ZFP64!0.90!11.07!ZFP64;;chr5:92918919..92918942,+!p1@NR2F1!0.89!31.74!NR2F1;;chr15:96874012..96874042,+!p2@NR2F2!0.87!61.27!NR2F2;;chr16:79634624..79634642,-!p1@MAF!0.87!26.57!MAF;;chr19:13213662..13213686,-!p1@LYL1!0.87!9.60!LYL1;;chr10:94449649..94449664,+!p3@HHEX!0.86!9.60!HHEX;;chr3:169381420..169381535,-!p1@MECOM!0.86!7.38!MECOM;;chr6:21597765..21597779,+!p2@SOX4!0.85!52.41!SOX4;;chr12:3068544..3068597,+!p1@TEAD4!0.85!39.12!TEAD4;;chr15:90544532..90544563,+!p1@ZNF710!0.85!12.55!ZNF710;;chr15:96876966..96877017,+!p12@NR2F2!0.85!8.86!NR2F2;;chr13:41240737..41240787,-!p1@FOXO1!0.84!76.03!FOXO1;;chr13:72441506..72441562,-!p3@DACH1!0.84!5.91!DACH1;;chr18:53068982..53068993,-!p20@TCF4!0.84!5.91!TCF4;;chr21:40177845..40177863,+!p1@ETS2!0.83!369.82!ETS2;;chr2:46524897..46524911,+!p2@EPAS1!0.83!16.98!EPAS1;;chr10:114710244..114710257,+!p3@TCF7L2!0.80!15.50!TCF7L2;;chr2:46602901..46602926,+!p7@EPAS1!0.80!7.38!EPAS1;;chr1:23885981..23886002,-!p1@ID3!0.79!995.77!ID3;;chr15:96874927..96874938,+!p8@NR2F2!0.79!11.81!NR2F2;;chr3:168864315..168864339,-!p2@MECOM!0.79!8.86!MECOM;;chr19:13213555..13213568,-!p5@LYL1!0.79!5.17!LYL1;;chr7:27169801..27169844,-!p2@HOXA4!0.79!5.17!HOXA4;;chr7:27183263..27183284,-!p2@HOXA5!0.79!5.17!HOXA5;;chr1:200011711..200011752,+!p3@NR5A2!0.79!5.17!NR5A2;;chr12:81110684..81110700,+!p1@MYF5!0.79!5.17!MYF5;;chr1:156470494..156470505,-!p3@MEF2D!0.77!7.38!MEF2D;;chr7:149470540..149470596,-!p2@ZNF467!0.77!6.64!ZNF467;;chr11:128563948..128564003,+!p1@FLI1!0.76!63.48!FLI1;;chr6:21593973..21593988,+!p1@SOX4!0.75!186.75!SOX4;;chr6:34204921..34204939,+!p3@HMGA1!0.75!155.75!HMGA1;;chr12:2986206..2986258,-!p2@FOXM1!0.74!30.26!FOXM1;;chr20:39317868..39317884,-!p1@MAFB!0.73!58.31!MAFB;;chr5:92918894..92918912,+!p2@NR2F1!0.73!15.50!NR2F1;;chr14:35873136..35873155,-!p9@NFKBIA!0.73!5.17!NFKBIA;;chr2:46524865..46524870,+!p9@EPAS1!0.73!5.17!EPAS1;;chr3:21792682..21792720,-!p1@ZNF385D!0.73!4.43!ZNF385D;;chr3:21792790..21792824,-!p4@ZNF385D!0.73!4.43!ZNF385D;;chr17:46671504..46671541,-!p2@HOXB5!0.73!4.43!HOXB5;;chr18:22932004..22932021,-!p2@ZNF521!0.73!4.43!ZNF521;;chr1:47695003..47695042,-!p2@TAL1!0.73!4.43!TAL1;;chr20:62680671..62680679,-!p2@SOX18!0.73!4.43!SOX18;;chr2:85360499..85360598,+!p1@TCF7L1!0.72!26.57!TCF7L1;;chr2:25475120..25475176,-!p2@DNMT3A!0.72!5.91!DNMT3A;;chr21:40177892..40177903,+!p2@ETS2!0.71!18.45!ETS2;;chr16:79634595..79634620,-!p2@MAF!0.71!8.12!MAF;;chr20:42295745..42295765,+!p1@MYBL2!0.70!73.82!MYBL2;;chr19:49865646..49865718,-!p1@TEAD2!0.70!39.12!TEAD2;;chr5:88179195..88179224,-!p3@MEF2C!0.69!6.64!MEF2C;;chr3:21792585..21792625,-!p2@ZNF385D!0.69!4.43!ZNF385D;;chr9:130954041..130954121,-!p2@CIZ1!0.68!18.45!CIZ1;;chr12:3068466..3068495,+!p3@TEAD4!0.68!8.86!TEAD4;;chr20:50159198..50159299,-!p1@NFATC2!0.68!5.91!NFATC2;;chr15:37392724..37392757,-!p1@MEIS2!0.67!19.19!MEIS2;;chr19:1652555..1652568,-!p2@TCF3!0.67!16.98!TCF3;;chr17:46622114..46622138,-!p4@HOXB2!0.67!5.91!HOXB2;;chr17:46675558..46675577,-!p2@HOXB6!0.67!3.69!HOXB6;;chr18:53068893..53068902,-!p28@TCF4!0.67!3.69!TCF4;;chr19:13213465..13213478,-!p7@LYL1!0.67!3.69!LYL1;;chr1:40105299..40105326,-!p1@HEYL!0.67!3.69!HEYL;;chr20:42602000..42602034,+!p5@TOX2!0.67!3.69!TOX2;;chr20:590944..590960,-!p1@TCF15!0.67!3.69!TCF15;;chr13:72441074..72441172,-!p2@DACH1!0.67!3.69!DACH1;;chr2:16082155..16082169,+!p3@MYCN!0.67!3.69!MYCN;;chr7:27170359..27170381,-!p1@HOXA4!0.67!3.69!HOXA4;;chr7:27183325..27183338,-!p5@HOXA5!0.67!3.69!HOXA5;;chr8:55370720..55370733,+!p2@SOX17!0.67!3.69!SOX17;;chr15:96873861..96873872,+!p9@NR2F2!0.66!8.12!NR2F2;;chr15:96874145..96874166,+!p7@NR2F2!0.66!7.38!NR2F2;;chr6:7108569..7108683,+!p3@RREB1!0.65!15.50!RREB1;;chr19:35455110..35455149,-!p1@ZNF792!0.65!7.38!ZNF792;;chr15:77713299..77713316,+!p3@HMG20A!0.65!5.91!HMG20A;;chr1:204042275..204042286,+!p4@SOX13!0.65!5.91!SOX13;;chr16:86544113..86544145,+!p1@FOXF1!0.65!4.43!FOXF1;;chr4:87928413..87928433,+!p3@AFF1!0.64!24.36!AFF1;;chr2:74730430..74730451,-!p1@LBX2!0.64!5.91!LBX2;;chr9:14314566..14314618,-!p1@NFIB!0.63!46.50!NFIB;;chr17:46655704..46655718,-!p2@HOXB4!0.63!5.17!HOXB4;;chr15:37391588..37391604,-!p11@MEIS2!0.63!4.43!MEIS2;;chr17:46126136..46126152,+!p1@NFE2L1!0.62!196.35!NFE2L1;;chr11:61520075..61520136,+!p1@C11orf9!0.61!7.38!C11orf9;;chr3:33482052..33482116,-!p2@UBP1!0.61!5.17!UBP1;;chr4:57522166..57522260,-!p2@HOPX!0.61!3.69!HOPX;;chr12:96588219..96588263,+!p2@ELK3!0.60!25.84!ELK3;;chrX:129244840..129244881,-!p2@ELF4!0.60!13.29!ELF4;;chr8:106330656..106330684,+!p1@ZFPM2!0.60!8.86!ZFPM2;;chr15:96874244..96874259,+!p5@NR2F2!0.60!8.12!NR2F2;;chr17:46675344..46675355,-!p9@HOXB6!0.60!2.95!HOXB6;;chr17:46675469..46675481,-!p4@HOXB6!0.60!2.95!HOXB6;;chr17:46675586..46675600,-!p6@HOXB6!0.60!2.95!HOXB6;;chrX:107018836..107018862,-!p8@TSC22D3!0.60!2.95!TSC22D3;;chr9:16705069..16705086,-!p3@BNC2!0.60!2.95!BNC2;;chr22:41721853..41721874,+!p6@ZC3H7B!0.60!2.95!ZC3H7B;;chr1:47697881..47697910,-!p4@TAL1!0.60!2.95!TAL1;;chr7:27183291..27183324,-!p1@HOXA5!0.60!2.95!HOXA5;;chr15:37392703..37392717,-!p8@MEIS2!0.59!4.43!MEIS2;;chr15:37392576..37392589,-!p12@MEIS2!0.59!3.69!MEIS2;;chr1:23696448..23696453,-!p5@ZNF436!0.59!3.69!ZNF436;;chr12:66218003..66218018,+!p9@HMGA2!0.59!3.69!HMGA2;;chr3:178789522..178789564,-!p2@ZMAT3!0.58!25.10!ZMAT3;;chr11:128392273..128392308,-!p2@ETS1!0.58!14.02!ETS1;;chr19:20188776..20188826,+!p1@ZNF90!0.58!8.86!ZNF90;;chr19:44037546..44037594,+!p1@ZNF575!0.58!6.64!ZNF575;;chr20:31350184..31350200,+!p1@DNMT3B!0.58!6.64!DNMT3B;;chr17:40719165..40719168,+!p4@MLX!0.58!3.69!MLX;;chr1:23696308..23696339,-!p2@ZNF436!0.57!6.64!ZNF436;;chr12:66218183..66218209,+!p4@HMGA2!0.57!5.91!HMGA2;;chr1:8926441..8926473,-!p10@ENO1!0.57!4.43!ENO1;;chr3:168865194..168865245,-!p3@MECOM!0.57!3.69!MECOM;;chr19:7580944..7581031,+!p1@ZNF358!0.56!98.17!ZNF358;;chr3:128206762..128206781,-!p2@GATA2!0.56!19.93!GATA2;;chr18:72922743..72922761,+!p3@TSHZ1!0.56!10.33!TSHZ1;;chr9:137217986..137218049,+!p3@RXRA!0.56!8.86!RXRA;;chr2:46524878..46524891,+!p3@EPAS1!0.56!5.17!EPAS1;;chr4:87928166..87928186,+!p12@AFF1!0.56!4.43!AFF1;;chr15:96874216..96874236,+!p13@NR2F2!0.56!4.43!NR2F2;;chr5:92918860..92918871,+!p10@NR2F1!0.56!2.95!NR2F1;;chr17:4890695..4890773,-!p2@CAMTA2!0.55!9.60!CAMTA2;;chr1:8877735..8877760,-!p8@RERE!0.55!8.12!RERE;;chrX:129244885..129244926,-!p3@ELF4!0.55!7.38!ELF4;;chr17:46622070..46622109,-!p1@HOXB2!0.55!6.64!HOXB2;;chr19:56152332..56152347,+!p4@ZNF580!0.55!6.64!ZNF580;;chr1:8483821..8483845,-!p11@RERE!0.55!5.91!RERE;;chr9:14314106..14314119,-!p5@NFIB!0.55!5.17!NFIB;;chr1:33722080..33722172,+!p1@ZNF362!0.54!58.31!ZNF362;;chr1:935467..935484,-!p1@HES4!0.54!13.29!HES4;;chr2:66662281..66662308,+!p1@MEIS1!0.54!10.33!MEIS1;;chr12:3069037..3069119,+!p2@TEAD4!0.54!10.33!TEAD4;;chr15:96874063..96874074,+!p10@NR2F2!0.54!5.17!NR2F2;;chr16:3185051..3185068,+!p3@ZNF213!0.54!4.43!ZNF213;;chr5:124082580..124082603,-!p4@ZNF608!0.54!2.95!ZNF608;;chr10:31607702..31607755,+!p3@ZEB1!0.54!2.95!ZEB1;;chr12:49454026..49454049,-!p9@MLL2!0.54!2.95!MLL2;;chr18:53255415..53255491,-!p1@TCF4!0.53!25.84!TCF4;;chr1:8877692..8877732,-!p1@RERE!0.53!24.36!RERE;;chr19:56111639..56111668,+!p2@ZNF524!0.53!8.12!ZNF524;;chr1:120190786..120190915,-!p1@ZNF697!0.52!21.41!ZNF697;;chrX:106960180..106960197,-!p2@TSC22D3!0.52!11.07!TSC22D3;;chr8:128749984..128750033,+!p4@MYC!0.52!10.33!MYC;;chr17:1959369..1959388,+!p2@HIC1!0.52!7.38!HIC1;;chr12:53574338..53574358,+!p2@ZNF740!0.52!5.17!ZNF740;;chr8:128750493..128750522,+!p10@MYC!0.52!3.69!MYC;;chr9:14313893..14313908,-!p7@NFIB!0.52!3.69!NFIB;;chr15:37392593..37392607,-!p13@MEIS2!0.52!2.95!MEIS2;;chr4:2263809..2263854,-!p1@MXD4!0.51!112.94!MXD4;;chr11:62369229..62369289,-!p2@MTA2!0.51!42.81!MTA2;;chr12:96588279..96588299,+!p4@ELK3!0.51!13.29!ELK3;;chr5:321810..321877,+!p1@AHRR!0.51!8.86!AHRR;;chr19:19516507..19516539,+!p7@GATAD2A!0.51!8.12!GATAD2A;;chr1:164528340..164528379,+!p4@PBX1!0.51!6.64!PBX1;;chr4:146402843..146402864,+!p3@SMAD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AD2A;;chr12:46123273..46123329,+!p3@ARID2!0.28!2.21!ARID2;;chr14:75988771..75988826,+!p1@BATF!0.28!1.48!BATF;;chr15:96881221..96881240,+!p19@NR2F2!0.28!1.48!NR2F2;;chr17:4890672..4890692,-!p3@CAMTA2!0.28!1.48!CAMTA2;;chr18:56530756..56530774,+!p6@ZNF532!0.28!1.48!ZNF532;;chr20:33413523..33413534,-!p3@NCOA6!0.28!1.48!NCOA6;;chr5:88179518..88179569,-!p5@MEF2C!0.28!1.48!MEF2C;;chr6:21597283..21597312,+!p7@SOX4!0.28!1.48!SOX4;;chr1:43148059..43148108,+!p1@YBX1!0.27!107.77!YBX1;;chr14:105886150..105886224,+!p1@MTA1!0.27!56.84!MTA1;;chr17:80477571..80477637,+!p1@FOXK2!0.27!50.93!FOXK2;;chr9:137218281..137218340,+!p1@RXRA!0.27!47.98!RXRA;;chr14:21566731..21566836,-!p1@ZNF219!0.27!17.72!ZNF219;;chr12:7079780..7079791,-!p2@PHB2!0.27!8.12!PHB2;;chr19:47615477..47615491,-!p3@ZC3H4!0.27!6.64!ZC3H4;;chr16:2059754..2059777,-!p2@ZNF598!0.27!5.17!ZNF598;;chr1:249132484..249132505,+!p4@ZNF672!0.27!4.43!ZNF672;;chr9:73029219..73029289,-!p2@KLF9!0.27!4.43!KLF9;;chr6:44233297..44233330,-!p2@NFKBIE!0.27!3.69!NFKBIE;;chr2:42795651..42795676,+!p3@MTA3!0.27!3.69!MTA3;;chr19:52674898..52674931,-!p3@ZNF836!0.27!2.95!ZNF836;;chr7:99102592..99102620,+!p3@ZKSCAN5!0.27!2.95!ZKSCAN5;;chr3:150126038..150126052,+!p8@TSC22D2!0.27!2.21!TSC22D2;;chr12:124457725..124457736,+!p2@ZNF664!0.27!2.21!ZNF664;;chr17:42297282..42297300,-!p9@UBTF!0.27!2.21!UBTF;;chr19:11750566..11750627,+!p1@ZNF833P!0.27!1.48!ZNF833P;;chr12:11802909..11802920,+!p7@ETV6!0.27!1.48!ETV6;;chr12:49413577..49413581,-!p5@MLL2!0.27!1.48!MLL2;;chr12:49446120..49446135,-!p4@MLL2!0.27!1.48!MLL2;;chr8:81398478..81398495,+!p7@ZBTB10!0.27!1.48!ZBTB10;;chr1:33004996..33005017,+!p3@ZBTB8A!0.27!1.48!ZBTB8A;;chr20:30193083..30193098,+!p1@ID1!0.26!134.34!ID1;;chr14:35873947..35873965,-!p1@NFKBIA!0.26!104.82!NFKBIA;;chr22:41697520..41697613,+!p1@ZC3H7B!0.26!93.01!ZC3H7B;;chr22:41864662..41864708,-!p1@PHF5A!0.26!69.39!PHF5A;;chr16:3930681..3930721,-!p1@CREBBP!0.26!28.05!CREBBP;;chr19:17356697..17356762,-!p1@NR2F6!0.26!22.14!NR2F6;;chr17:35766967..35767022,+!p1@TADA2A!0.26!17.72!TADA2A;;chr19:56092195..56092248,-!p1@ZNF579!0.26!16.98!ZNF579;;chr22:41777927..41777971,+!p1@TEF!0.26!13.29!TEF;;chr20:3388238..3388323,-!p1@C20orf194!0.26!11.07!C20orf194;;chr8:144373550..144373617,+!p1@ZNF696!0.26!5.17!ZNF696;;chr3:5020939..5020952,+!p2@BHLHE40!0.26!4.43!BHLHE40;;chr1:164528384..164528409,+!p3@PBX1!0.26!4.43!PBX1;;chr7:6676986..6677005,+!p2@ENST00000427912!0.26!3.69!ZNF316;;chr8:86089369..86089408,+!p1@E2F5!0.26!3.69!E2F5;;chr12:66218255..66218304,+!p3@HMGA2!0.26!3.69!HMGA2;;chr10:51572339..51572376,+!p4@NCOA4!0.26!2.95!NCOA4;;chr4:146402925..146402957,+!p4@SMAD1!0.26!2.95!SMAD1;;chr19:55987998..55988026,+!p2@ZNF628!0.26!2.21!ZNF628;;chr1:247171347..247171366,-!p2@ZNF695!0.26!2.21!ZNF695;;chr18:3448455..3448480,+!p5@TGIF1!0.26!2.21!TGIF1;;chr18:53257068..53257086,-!p12@TCF4!0.26!1.48!TCF4;;chr4:87967965..87967983,+!p16@AFF1!0.26!1.48!AFF1;;chrX:107018969..107019024,-!p6@TSC22D3!0.26!1.48!TSC22D3;;chr15:31619013..31619095,+!p1@KLF13!0.25!36.91!KLF13;;chr4:103422499..103422632,+!p1@NFKB1!0.25!33.22!NFKB1;;chr19:6424783..6424802,-!p2@KHSRP!0.25!32.48!KHSRP;;chr18:51750888..51750920,-!p3@MBD2!0.25!11.07!MBD2;;chr18:72922811..72922827,+!p1@TSHZ1!0.25!7.38!TSHZ1;;chr16:2059797..2059837,-!p1@ZNF598!0.25!5.91!ZNF598;;chr19:12721790..12721810,+!p2@ZNF791!0.25!3.69!ZNF791;;chr1:8763463..8763499,-!p6@RERE!0.25!3.69!RERE;;chr9:3526360..3526421,-!p5@RFX3!0.25!2.21!RFX3;;chr9:35732514..35732530,+!p5@CREB3!0.25!1.48!CREB3;;chr3:107318157..107318172,+!p6@BBX!0.25!1.48!BBX;;chr19:12175504..12175519,+!p2@ZNF844!0.25!1.48!ZNF844;;chr6:34204642..34204664,+!p2@HMGA1!0.24!210.37!HMGA1;;chr17:46125707..46125746,+!p2@NFE2L1!0.24!82.67!NFE2L1;;chr17:40540377..40540481,-!p1@STAT3!0.24!79.72!STAT3;;chr19:42759266..42759290,-!p1@ERF!0.24!49.46!ERF;;chr20:44718538..44718612,-!p1@NCOA5!0.24!42.81!NCOA5;;chr17:61920023..61920110,-!p1@SMARCD2!0.24!21.41!SMARCD2;;chr11:64073022..64073056,+!p1@ESRRA!0.24!18.45!ESRRA;;chr11:62521614..62521646,-!p1@ZBTB3!0.24!7.38!ZBTB3;;chr7:149194843..149194922,-!p2@ZNF746!0.24!7.38!ZNF746;;chr17:42298615..42298692,-!p2@UBTF!0.24!7.38!UBTF;;chr3:185826764..185826803,-!p2@ETV5!0.24!5.17!ETV5;;chr3:44666551..44666577,+!p2@ZNF197!0.24!5.17!ZNF197;;chr4:146402966..146402985,+!p2@SMAD1!0.24!5.17!SMAD1;;chr19:56092252..56092287,-!p2@ZNF579!0.24!3.69!ZNF579;;chr11:58346585..58346607,+!p2@ZFP91!0.24!2.95!ZFP91;;chr15:66994561..66994597,+!p2@SMAD6!0.24!2.95!SMAD6;;chr8:145159447..145159458,+!p4@MAF1!0.24!2.95!MAF1;;chr7:27135591..27135658,-!p1@HOXA1!0.24!2.21!HOXA1;;chr2:242576946..242576996,-!p4@THAP4!0.24!2.21!THAP4;;chr12:57400227..57400245,-!p2@ZBTB39!0.24!2.21!ZBTB39;;chr12:66218212..66218244,+!p5@HMGA2!0.24!1.48!HMGA2;;chr5:43067583..43067606,+!p7@ZNF131!0.24!1.48!ZNF131;;chr6:168227611..168227624,+!p2@MLLT4!0.24!1.48!MLLT4;;chr7:127032114..127032163,-!p2@ZNF800!0.24!1.48!ZNF800;;chr19:58987786..58987805,+!p3@ZNF446!0.24!1.48!ZNF446;;chr3:71632894..71632909,-!p17@FOXP1!0.24!1.48!FOXP1;;chr15:96875041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Line 67: Line 43:
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|rna_box=119
|rna_catalog_number=SC5005
|rna_concentration=1.41
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=lot:1253
|rna_od260/230=
|rna_od260/280=
|rna_position=H9
|rna_rin=9.7
|rna_sample_type=total RNA
|rna_tube_id=119H9
|rna_weight_ug=10
|rnaseq_library_id=SRhi10014.ACAGTG
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=hepatic sinusoidal endothelial cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.17561011876485e-210!GO:0005737;cytoplasm;1.27981334940737e-189!GO:0043226;organelle;4.11922064567643e-165!GO:0043229;intracellular organelle;6.43140669477541e-165!GO:0043231;intracellular membrane-bound organelle;1.09477540736159e-162!GO:0043227;membrane-bound organelle;2.77937488150047e-162!GO:0044444;cytoplasmic part;1.65802455591762e-141!GO:0044422;organelle part;3.15981431124938e-125!GO:0044446;intracellular organelle part;3.87658796062963e-124!GO:0032991;macromolecular complex;2.38558472553095e-81!GO:0044237;cellular metabolic process;3.82261071127692e-73!GO:0005739;mitochondrion;4.22636536254901e-73!GO:0044238;primary metabolic process;5.26294784311734e-72!GO:0005515;protein binding;2.74208619558399e-70!GO:0030529;ribonucleoprotein complex;7.35892254579905e-68!GO:0043170;macromolecule metabolic process;1.02177313511725e-63!GO:0043233;organelle lumen;1.9038179438474e-58!GO:0031974;membrane-enclosed lumen;1.9038179438474e-58!GO:0031090;organelle membrane;5.28869147887985e-54!GO:0003723;RNA binding;4.9683032223949e-50!GO:0044428;nuclear part;4.9683032223949e-50!GO:0019538;protein metabolic process;6.90407235846815e-50!GO:0044429;mitochondrial part;1.01241720583761e-49!GO:0005634;nucleus;8.14820814041069e-49!GO:0005840;ribosome;2.37192776478344e-45!GO:0044260;cellular macromolecule metabolic process;5.53782389273604e-44!GO:0044267;cellular protein metabolic process;8.03888582267185e-44!GO:0031967;organelle envelope;1.91859791267732e-42!GO:0043234;protein complex;2.26190779732846e-42!GO:0031975;envelope;4.15685309313956e-42!GO:0003735;structural constituent of ribosome;2.59838224700647e-41!GO:0006412;translation;1.54822985804567e-40!GO:0016043;cellular component organization and biogenesis;2.41653136922328e-40!GO:0005829;cytosol;2.05275844256179e-37!GO:0009058;biosynthetic process;6.50677163820117e-37!GO:0033279;ribosomal subunit;1.3959467314923e-36!GO:0015031;protein transport;1.66215034990694e-34!GO:0005740;mitochondrial envelope;2.54143993947929e-34!GO:0033036;macromolecule localization;8.00497607494461e-34!GO:0044249;cellular biosynthetic process;9.73952333943093e-34!GO:0009059;macromolecule biosynthetic process;3.36272806625114e-33!GO:0006396;RNA processing;8.31579179916202e-33!GO:0031966;mitochondrial membrane;1.74183241425756e-32!GO:0045184;establishment of protein localization;8.20505920914666e-32!GO:0008104;protein localization;1.70821302531288e-31!GO:0043283;biopolymer metabolic process;2.76508241401253e-31!GO:0031981;nuclear lumen;1.04893324410629e-30!GO:0019866;organelle inner membrane;2.7107717738438e-30!GO:0006996;organelle organization and biogenesis;2.21569168040547e-29!GO:0005743;mitochondrial inner membrane;3.14535404303624e-28!GO:0046907;intracellular transport;5.30502373474299e-28!GO:0016071;mRNA metabolic process;9.61498913186869e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.81403239935057e-26!GO:0065003;macromolecular complex assembly;1.81403239935057e-26!GO:0043228;non-membrane-bound organelle;3.5383771194026e-26!GO:0043232;intracellular non-membrane-bound organelle;3.5383771194026e-26!GO:0008380;RNA splicing;1.14774466764315e-24!GO:0022607;cellular component assembly;1.07555901028425e-23!GO:0010467;gene expression;1.72236495262294e-23!GO:0006886;intracellular protein transport;1.85222310544313e-23!GO:0006397;mRNA processing;2.21825443877969e-23!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.35992578419827e-23!GO:0006119;oxidative phosphorylation;2.93284295113747e-22!GO:0044445;cytosolic part;1.36312790057188e-21!GO:0012505;endomembrane system;1.20763264474135e-20!GO:0006259;DNA metabolic process;3.4382635969303e-20!GO:0015934;large ribosomal subunit;4.84336718909459e-20!GO:0044455;mitochondrial membrane part;6.86561593614706e-20!GO:0005654;nucleoplasm;1.27195724544215e-19!GO:0005783;endoplasmic reticulum;2.49095602751259e-19!GO:0000166;nucleotide binding;3.52954028358756e-19!GO:0031980;mitochondrial lumen;4.06934007986083e-19!GO:0005759;mitochondrial matrix;4.06934007986083e-19!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.47163038751106e-19!GO:0051649;establishment of cellular localization;2.00575018486294e-18!GO:0051641;cellular localization;3.97888050476855e-18!GO:0005681;spliceosome;1.12918858311584e-17!GO:0015935;small ribosomal subunit;1.45203315724538e-17!GO:0005746;mitochondrial respiratory chain;2.36647108481049e-17!GO:0007049;cell cycle;4.35540747602241e-17!GO:0044451;nucleoplasm part;2.64813625353287e-16!GO:0044432;endoplasmic reticulum part;2.74781880844035e-16!GO:0006457;protein folding;3.48775157097949e-16!GO:0051186;cofactor metabolic process;3.70397842776034e-16!GO:0005794;Golgi apparatus;3.70397842776034e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.28254218433654e-16!GO:0050136;NADH dehydrogenase (quinone) activity;8.11626227777955e-16!GO:0003954;NADH dehydrogenase activity;8.11626227777955e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.11626227777955e-16!GO:0048770;pigment granule;8.79401169163161e-16!GO:0042470;melanosome;8.79401169163161e-16!GO:0016874;ligase activity;8.84923026475245e-16!GO:0016462;pyrophosphatase activity;1.13459279290037e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.15033634483137e-15!GO:0043412;biopolymer modification;1.27196873643004e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;1.28455388890267e-15!GO:0017111;nucleoside-triphosphatase activity;5.17856739546762e-15!GO:0008134;transcription factor binding;7.08565037868038e-15!GO:0006464;protein modification process;9.62570726509309e-15!GO:0006512;ubiquitin cycle;1.64039511417178e-14!GO:0016192;vesicle-mediated transport;2.22439648865575e-14!GO:0032553;ribonucleotide binding;2.56209323004515e-14!GO:0032555;purine ribonucleotide binding;2.56209323004515e-14!GO:0044265;cellular macromolecule catabolic process;3.87244891661397e-14!GO:0042775;organelle ATP synthesis coupled electron transport;6.73155159433266e-14!GO:0042773;ATP synthesis coupled electron transport;6.73155159433266e-14!GO:0030964;NADH dehydrogenase complex (quinone);7.51469773919265e-14!GO:0045271;respiratory chain complex I;7.51469773919265e-14!GO:0005747;mitochondrial respiratory chain complex I;7.51469773919265e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.58371352900319e-14!GO:0017076;purine nucleotide binding;1.00932336438547e-13!GO:0000502;proteasome complex (sensu Eukaryota);1.21662186319504e-13!GO:0022402;cell cycle process;1.98912167910487e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.10195132167257e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.41295319780304e-13!GO:0044248;cellular catabolic process;3.69414387897997e-13!GO:0005761;mitochondrial ribosome;4.51702190725933e-13!GO:0000313;organellar ribosome;4.51702190725933e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.84833213937763e-13!GO:0022618;protein-RNA complex assembly;1.58074103530729e-12!GO:0009057;macromolecule catabolic process;1.64216418209157e-12!GO:0006732;coenzyme metabolic process;1.71079502523254e-12!GO:0043285;biopolymer catabolic process;2.9711351915706e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;3.46965617357919e-12!GO:0006605;protein targeting;3.80770198573257e-12!GO:0019941;modification-dependent protein catabolic process;5.89234186799386e-12!GO:0043632;modification-dependent macromolecule catabolic process;5.89234186799386e-12!GO:0044257;cellular protein catabolic process;6.82722046550342e-12!GO:0043687;post-translational protein modification;7.62559017749937e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.65887039391034e-12!GO:0006511;ubiquitin-dependent protein catabolic process;1.03192357694633e-11!GO:0000278;mitotic cell cycle;1.07566094113409e-11!GO:0005789;endoplasmic reticulum membrane;1.21410758495364e-11!GO:0009055;electron carrier activity;3.50412971969419e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;4.31166001010732e-11!GO:0000375;RNA splicing, via transesterification reactions;4.31166001010732e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.31166001010732e-11!GO:0005730;nucleolus;4.85255622389346e-11!GO:0012501;programmed cell death;6.04257516368302e-11!GO:0051082;unfolded protein binding;6.22622296114e-11!GO:0006915;apoptosis;7.7132313123303e-11!GO:0032559;adenyl ribonucleotide binding;8.77718745675351e-11!GO:0048193;Golgi vesicle transport;1.11192272792647e-10!GO:0005524;ATP binding;1.17710292053095e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;1.5566390916212e-10!GO:0030163;protein catabolic process;4.05120819885832e-10!GO:0030554;adenyl nucleotide binding;4.13476056024165e-10!GO:0006974;response to DNA damage stimulus;4.23449438689152e-10!GO:0008135;translation factor activity, nucleic acid binding;4.86022089627953e-10!GO:0051276;chromosome organization and biogenesis;5.14920508563428e-10!GO:0006323;DNA packaging;7.90079033056457e-10!GO:0008219;cell death;1.28944836304828e-09!GO:0016265;death;1.28944836304828e-09!GO:0006163;purine nucleotide metabolic process;1.29719393078903e-09!GO:0003712;transcription cofactor activity;1.34682805978961e-09!GO:0008639;small protein conjugating enzyme activity;1.66977777254207e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.67713631851094e-09!GO:0005635;nuclear envelope;1.75075203962716e-09!GO:0003676;nucleic acid binding;2.58661603641823e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.73366723696333e-09!GO:0004842;ubiquitin-protein ligase activity;2.99478563107006e-09!GO:0009150;purine ribonucleotide metabolic process;3.09534503802121e-09!GO:0051188;cofactor biosynthetic process;4.89542415337493e-09!GO:0008565;protein transporter activity;5.19071914285498e-09!GO:0009259;ribonucleotide metabolic process;5.90061785997831e-09!GO:0005793;ER-Golgi intermediate compartment;7.17995777571467e-09!GO:0051726;regulation of cell cycle;7.69570174280491e-09!GO:0044427;chromosomal part;8.90838344053515e-09!GO:0006164;purine nucleotide biosynthetic process;9.46120946669591e-09!GO:0019787;small conjugating protein ligase activity;9.4809014075243e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.21997287914401e-08!GO:0005694;chromosome;1.57208135038781e-08!GO:0000074;regulation of progression through cell cycle;1.5920161538703e-08!GO:0005773;vacuole;1.5920161538703e-08!GO:0006461;protein complex assembly;1.99245562264936e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.25623014458689e-08!GO:0009199;ribonucleoside triphosphate metabolic process;3.21156349627287e-08!GO:0042623;ATPase activity, coupled;3.63214162327101e-08!GO:0030532;small nuclear ribonucleoprotein complex;3.85519306590184e-08!GO:0009141;nucleoside triphosphate metabolic process;3.95388998958503e-08!GO:0022403;cell cycle phase;4.06133595428338e-08!GO:0009117;nucleotide metabolic process;4.09960226098456e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.30605938465378e-08!GO:0009144;purine nucleoside triphosphate metabolic process;4.30605938465378e-08!GO:0006793;phosphorus metabolic process;4.47434535613166e-08!GO:0006796;phosphate metabolic process;4.47434535613166e-08!GO:0000785;chromatin;4.64396733644161e-08!GO:0009056;catabolic process;4.79471144462234e-08!GO:0031965;nuclear membrane;5.65998203309168e-08!GO:0044453;nuclear membrane part;6.13035956222709e-08!GO:0015986;ATP synthesis coupled proton transport;6.45449083380181e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.45449083380181e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.619970765479e-08!GO:0006333;chromatin assembly or disassembly;6.73481107578502e-08!GO:0048523;negative regulation of cellular process;7.94209439793553e-08!GO:0009260;ribonucleotide biosynthetic process;7.94209439793553e-08!GO:0019829;cation-transporting ATPase activity;8.04885817532373e-08!GO:0000087;M phase of mitotic cell cycle;8.04885817532373e-08!GO:0016604;nuclear body;8.04885817532373e-08!GO:0006281;DNA repair;8.4091979960679e-08!GO:0007067;mitosis;8.561057494299e-08!GO:0009060;aerobic respiration;9.26865905578085e-08!GO:0016887;ATPase activity;1.02288659889986e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.03349772236933e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.03349772236933e-07!GO:0006446;regulation of translational initiation;1.18171608826846e-07!GO:0016881;acid-amino acid ligase activity;1.18443710032517e-07!GO:0006913;nucleocytoplasmic transport;1.31754543618632e-07!GO:0003743;translation initiation factor activity;1.32622757791968e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.39067593802936e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.39067593802936e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.42885990379189e-07!GO:0051301;cell division;1.44603783252797e-07!GO:0044431;Golgi apparatus part;1.52767435710717e-07!GO:0006413;translational initiation;1.59455325106821e-07!GO:0000323;lytic vacuole;1.71349113070611e-07!GO:0005764;lysosome;1.71349113070611e-07!GO:0046034;ATP metabolic process;1.94860617748962e-07!GO:0016310;phosphorylation;2.08795942454675e-07!GO:0016070;RNA metabolic process;2.53951771820608e-07!GO:0051169;nuclear transport;2.53951771820608e-07!GO:0009719;response to endogenous stimulus;2.80189095147933e-07!GO:0065004;protein-DNA complex assembly;2.89503213672423e-07!GO:0016740;transferase activity;2.98347416678322e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.53945541027756e-07!GO:0016023;cytoplasmic membrane-bound vesicle;5.46854504197507e-07!GO:0006754;ATP biosynthetic process;5.49158726724694e-07!GO:0006753;nucleoside phosphate metabolic process;5.49158726724694e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.51330123926534e-07!GO:0042254;ribosome biogenesis and assembly;6.71929620030605e-07!GO:0009108;coenzyme biosynthetic process;6.77634234391219e-07!GO:0017038;protein import;6.86716078892318e-07!GO:0005839;proteasome core complex (sensu Eukaryota);7.67046211026639e-07!GO:0005788;endoplasmic reticulum lumen;8.77277655914805e-07!GO:0045333;cellular respiration;8.77277655914805e-07!GO:0031988;membrane-bound vesicle;8.80410539540949e-07!GO:0045259;proton-transporting ATP synthase complex;9.43155342864258e-07!GO:0006260;DNA replication;1.02266806598403e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.08319950873954e-06!GO:0050794;regulation of cellular process;1.25633424618154e-06!GO:0016491;oxidoreductase activity;1.28142825256347e-06!GO:0019899;enzyme binding;1.43073896649567e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.50531348011913e-06!GO:0006366;transcription from RNA polymerase II promoter;1.58034090884621e-06!GO:0006399;tRNA metabolic process;1.69446933981855e-06!GO:0005768;endosome;1.73891950150771e-06!GO:0006334;nucleosome assembly;1.91931917468911e-06!GO:0006099;tricarboxylic acid cycle;1.93749461902488e-06!GO:0046356;acetyl-CoA catabolic process;1.93749461902488e-06!GO:0048519;negative regulation of biological process;2.20711409076062e-06!GO:0031497;chromatin assembly;2.47786708331771e-06!GO:0003924;GTPase activity;2.59153028997957e-06!GO:0005525;GTP binding;2.99479754513813e-06!GO:0016787;hydrolase activity;3.12800387882388e-06!GO:0007005;mitochondrion organization and biogenesis;3.22279025634601e-06!GO:0006084;acetyl-CoA metabolic process;3.84450034838457e-06!GO:0031410;cytoplasmic vesicle;4.17017764520791e-06!GO:0065002;intracellular protein transport across a membrane;4.18799609553091e-06!GO:0031982;vesicle;4.57982777876667e-06!GO:0003697;single-stranded DNA binding;4.84066246413922e-06!GO:0016568;chromatin modification;4.89056875924861e-06!GO:0042981;regulation of apoptosis;4.93699688456239e-06!GO:0043067;regulation of programmed cell death;5.15821625335283e-06!GO:0030036;actin cytoskeleton organization and biogenesis;5.80534804638595e-06!GO:0007264;small GTPase mediated signal transduction;5.89540295918038e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.07228555930685e-06!GO:0004812;aminoacyl-tRNA ligase activity;6.07228555930685e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.07228555930685e-06!GO:0005643;nuclear pore;6.39109324382366e-06!GO:0004298;threonine endopeptidase activity;6.52450057366988e-06!GO:0051246;regulation of protein metabolic process;6.55049269067118e-06!GO:0031252;leading edge;6.6315758577985e-06!GO:0016044;membrane organization and biogenesis;6.73012077059078e-06!GO:0000279;M phase;6.98986599298119e-06!GO:0006916;anti-apoptosis;7.22550637269346e-06!GO:0051187;cofactor catabolic process;7.23500924763283e-06!GO:0043069;negative regulation of programmed cell death;7.383617124611e-06!GO:0030120;vesicle coat;7.8055571151941e-06!GO:0030662;coated vesicle membrane;7.8055571151941e-06!GO:0045786;negative regulation of progression through cell cycle;8.21705728210637e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;8.61179640518014e-06!GO:0000139;Golgi membrane;8.79390553476358e-06!GO:0043066;negative regulation of apoptosis;1.01686233975081e-05!GO:0048475;coated membrane;1.04073525418422e-05!GO:0030117;membrane coat;1.04073525418422e-05!GO:0005762;mitochondrial large ribosomal subunit;1.04360084990945e-05!GO:0000315;organellar large ribosomal subunit;1.04360084990945e-05!GO:0032446;protein modification by small protein conjugation;1.04680472237751e-05!GO:0005667;transcription factor complex;1.06760684566296e-05!GO:0015630;microtubule cytoskeleton;1.13409914558663e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.19134621163484e-05!GO:0005770;late endosome;1.30071659952286e-05!GO:0016607;nuclear speck;1.45178592881898e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.56586704624094e-05!GO:0009109;coenzyme catabolic process;1.67302452924452e-05!GO:0006752;group transfer coenzyme metabolic process;1.70438345974126e-05!GO:0043038;amino acid activation;1.90157936632955e-05!GO:0006418;tRNA aminoacylation for protein translation;1.90157936632955e-05!GO:0043039;tRNA aminoacylation;1.90157936632955e-05!GO:0016567;protein ubiquitination;1.90157936632955e-05!GO:0046930;pore complex;2.01203717389513e-05!GO:0003714;transcription corepressor activity;2.13609218685217e-05!GO:0008654;phospholipid biosynthetic process;2.24378711710221e-05!GO:0030029;actin filament-based process;2.48737831047526e-05!GO:0032561;guanyl ribonucleotide binding;2.64152991462007e-05!GO:0019001;guanyl nucleotide binding;2.64152991462007e-05!GO:0006091;generation of precursor metabolites and energy;2.82654385481642e-05!GO:0045454;cell redox homeostasis;2.90187818210861e-05!GO:0007243;protein kinase cascade;3.06485120740841e-05!GO:0000245;spliceosome assembly;3.22117274761638e-05!GO:0016779;nucleotidyltransferase activity;3.4948815916139e-05!GO:0000151;ubiquitin ligase complex;3.54790081568827e-05!GO:0008047;enzyme activator activity;4.38286972943754e-05!GO:0044440;endosomal part;4.54481484695167e-05!GO:0010008;endosome membrane;4.54481484695167e-05!GO:0008026;ATP-dependent helicase activity;5.23691258008394e-05!GO:0016853;isomerase activity;5.75857907042403e-05!GO:0009165;nucleotide biosynthetic process;7.7088948648872e-05!GO:0004386;helicase activity;7.87349120438922e-05!GO:0016564;transcription repressor activity;7.94988973158349e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.83641579014094e-05!GO:0007010;cytoskeleton organization and biogenesis;9.49368005859214e-05!GO:0051329;interphase of mitotic cell cycle;9.81762066023773e-05!GO:0006364;rRNA processing;0.000101244875600514!GO:0005813;centrosome;0.000101990742348649!GO:0005769;early endosome;0.000126721776804949!GO:0003713;transcription coactivator activity;0.000142351506196343!GO:0044262;cellular carbohydrate metabolic process;0.000155485106626166!GO:0051170;nuclear import;0.000156301032713321!GO:0006606;protein import into nucleus;0.00017572214735041!GO:0031968;organelle outer membrane;0.00018611294915373!GO:0005798;Golgi-associated vesicle;0.00019272017274371!GO:0016049;cell growth;0.000196307805415117!GO:0019867;outer membrane;0.000202823935325803!GO:0051427;hormone receptor binding;0.000203793446456571!GO:0043566;structure-specific DNA binding;0.000203793446456571!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000205978819415981!GO:0006403;RNA localization;0.000210552465858616!GO:0005774;vacuolar membrane;0.000223328840063551!GO:0016072;rRNA metabolic process;0.000224702810013087!GO:0050657;nucleic acid transport;0.000230120914674598!GO:0051236;establishment of RNA localization;0.000230120914674598!GO:0050658;RNA transport;0.000230120914674598!GO:0008361;regulation of cell size;0.00025015357992342!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00025015357992342!GO:0051325;interphase;0.000260538153232761!GO:0005741;mitochondrial outer membrane;0.000268643067065466!GO:0016126;sterol biosynthetic process;0.000281938545471819!GO:0005096;GTPase activator activity;0.000294842316583042!GO:0030867;rough endoplasmic reticulum membrane;0.000298271721938249!GO:0007040;lysosome organization and biogenesis;0.000341567698736629!GO:0035257;nuclear hormone receptor binding;0.00040119896133012!GO:0005815;microtubule organizing center;0.000438840902136303!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00043980763024736!GO:0015399;primary active transmembrane transporter activity;0.00043980763024736!GO:0001558;regulation of cell growth;0.000441621592248667!GO:0050789;regulation of biological process;0.000457935007118463!GO:0033116;ER-Golgi intermediate compartment membrane;0.000469971200244631!GO:0007265;Ras protein signal transduction;0.000496245465776244!GO:0016859;cis-trans isomerase activity;0.000503060364823141!GO:0006897;endocytosis;0.000506629109698105!GO:0010324;membrane invagination;0.000506629109698105!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000526517965935847!GO:0005905;coated pit;0.000536304458193385!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000540654859212724!GO:0006695;cholesterol biosynthetic process;0.000561659151519676!GO:0006613;cotranslational protein targeting to membrane;0.000561659151519676!GO:0000314;organellar small ribosomal subunit;0.000576130605246172!GO:0005763;mitochondrial small ribosomal subunit;0.000576130605246172!GO:0044437;vacuolar part;0.000650211803840429!GO:0005765;lysosomal membrane;0.000703396879850689!GO:0065009;regulation of a molecular function;0.000704200377537445!GO:0005048;signal sequence binding;0.00071200124510161!GO:0003899;DNA-directed RNA polymerase activity;0.00080399658205535!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000804976831299997!GO:0000786;nucleosome;0.000817222313442473!GO:0046474;glycerophospholipid biosynthetic process;0.000904667213865113!GO:0048522;positive regulation of cellular process;0.00103676506699367!GO:0008250;oligosaccharyl transferase complex;0.00104647213122425!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00106795142422625!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00107994030161385!GO:0048471;perinuclear region of cytoplasm;0.00108120510781756!GO:0007033;vacuole organization and biogenesis;0.00108120510781756!GO:0043623;cellular protein complex assembly;0.00109816813873641!GO:0006818;hydrogen transport;0.00114950185687567!GO:0051920;peroxiredoxin activity;0.00121764852991873!GO:0015980;energy derivation by oxidation of organic compounds;0.00122774553709223!GO:0005083;small GTPase regulator activity;0.00125776326965959!GO:0019843;rRNA binding;0.00130954398805073!GO:0015992;proton transport;0.00132439806627112!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00143632665340678!GO:0007242;intracellular signaling cascade;0.00146698434419202!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00146698434419202!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00146698434419202!GO:0006950;response to stress;0.00148717902370379!GO:0008632;apoptotic program;0.00154936602593606!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00164328860399072!GO:0051028;mRNA transport;0.00164506446846923!GO:0051087;chaperone binding;0.00172125090443798!GO:0006414;translational elongation;0.00176908759843437!GO:0051789;response to protein stimulus;0.00182319438441142!GO:0006986;response to unfolded protein;0.00182319438441142!GO:0042802;identical protein binding;0.00192313857375892!GO:0008092;cytoskeletal protein binding;0.0019443398396607!GO:0003724;RNA helicase activity;0.00201519070239797!GO:0031902;late endosome membrane;0.00204587984354241!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00223648573911938!GO:0043492;ATPase activity, coupled to movement of substances;0.00235768771297687!GO:0030133;transport vesicle;0.00241513252790617!GO:0018196;peptidyl-asparagine modification;0.00250222421735992!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00250222421735992!GO:0009967;positive regulation of signal transduction;0.00262646362531891!GO:0016563;transcription activator activity;0.00278203454099885!GO:0005885;Arp2/3 protein complex;0.0027844622212092!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00278530394040298!GO:0043681;protein import into mitochondrion;0.00281942543907532!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00283346719068947!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00283346719068947!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00283346719068947!GO:0046489;phosphoinositide biosynthetic process;0.00283346719068947!GO:0009966;regulation of signal transduction;0.0029411964774228!GO:0004576;oligosaccharyl transferase activity;0.00299455923418348!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00307707484348361!GO:0006650;glycerophospholipid metabolic process;0.00308254321560978!GO:0030027;lamellipodium;0.00318030675188917!GO:0006509;membrane protein ectodomain proteolysis;0.00323378699809584!GO:0033619;membrane protein proteolysis;0.00323378699809584!GO:0046467;membrane lipid biosynthetic process;0.00331640457245334!GO:0005684;U2-dependent spliceosome;0.00340999206624903!GO:0017166;vinculin binding;0.00343166386492242!GO:0030118;clathrin coat;0.00343166386492242!GO:0043021;ribonucleoprotein binding;0.00355519364414013!GO:0008610;lipid biosynthetic process;0.00356282915883744!GO:0043488;regulation of mRNA stability;0.00382933176748649!GO:0043487;regulation of RNA stability;0.00382933176748649!GO:0031324;negative regulation of cellular metabolic process;0.00401000450962498!GO:0006612;protein targeting to membrane;0.00401693796099003!GO:0006740;NADPH regeneration;0.00409848318640317!GO:0006098;pentose-phosphate shunt;0.00409848318640317!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00411554435088103!GO:0006839;mitochondrial transport;0.00417130184866934!GO:0006626;protein targeting to mitochondrion;0.00443407372835141!GO:0006778;porphyrin metabolic process;0.00474863471994236!GO:0033013;tetrapyrrole metabolic process;0.00474863471994236!GO:0008139;nuclear localization sequence binding;0.00476073312993665!GO:0030176;integral to endoplasmic reticulum membrane;0.00480547739264323!GO:0022890;inorganic cation transmembrane transporter activity;0.00496037894821263!GO:0030695;GTPase regulator activity;0.00508777949385905!GO:0030658;transport vesicle membrane;0.00514692148492108!GO:0005819;spindle;0.0053174044901625!GO:0030041;actin filament polymerization;0.0053174044901625!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00559961460024595!GO:0048487;beta-tubulin binding;0.00572768866873692!GO:0005099;Ras GTPase activator activity;0.00575510777250466!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00578520868914729!GO:0015036;disulfide oxidoreductase activity;0.00593524102387269!GO:0007266;Rho protein signal transduction;0.00593524102387269!GO:0006979;response to oxidative stress;0.00596463741592124!GO:0005637;nuclear inner membrane;0.00602125725768263!GO:0005791;rough endoplasmic reticulum;0.00648428536145944!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00681072544143972!GO:0015002;heme-copper terminal oxidase activity;0.00681072544143972!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00681072544143972!GO:0004129;cytochrome-c oxidase activity;0.00681072544143972!GO:0030132;clathrin coat of coated pit;0.00705416715283122!GO:0030384;phosphoinositide metabolic process;0.00750949106725381!GO:0030659;cytoplasmic vesicle membrane;0.00783791829182476!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00786938950544344!GO:0051101;regulation of DNA binding;0.0082614082431137!GO:0040008;regulation of growth;0.00835838752812042!GO:0007050;cell cycle arrest;0.00867011684268664!GO:0016197;endosome transport;0.00909188552996319!GO:0042168;heme metabolic process;0.00909188552996319!GO:0003729;mRNA binding;0.00935005310405265!GO:0008186;RNA-dependent ATPase activity;0.00953589655606703!GO:0030660;Golgi-associated vesicle membrane;0.00978859533768441!GO:0001726;ruffle;0.00980452837042448!GO:0007006;mitochondrial membrane organization and biogenesis;0.00980452837042448!GO:0030308;negative regulation of cell growth;0.00993531219340731!GO:0030880;RNA polymerase complex;0.0105927345099602!GO:0046483;heterocycle metabolic process;0.0106019251385348!GO:0005874;microtubule;0.0107086451561054!GO:0006891;intra-Golgi vesicle-mediated transport;0.0107086451561054!GO:0006402;mRNA catabolic process;0.0107086451561054!GO:0051540;metal cluster binding;0.0108511542069528!GO:0051536;iron-sulfur cluster binding;0.0108511542069528!GO:0006643;membrane lipid metabolic process;0.0108775423355002!GO:0045792;negative regulation of cell size;0.011066735145692!GO:0051252;regulation of RNA metabolic process;0.0110946034169476!GO:0033673;negative regulation of kinase activity;0.0114546828603106!GO:0006469;negative regulation of protein kinase activity;0.0114546828603106!GO:0065007;biological regulation;0.0115299665999122!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0116651909634164!GO:0006779;porphyrin biosynthetic process;0.0121098797506599!GO:0033014;tetrapyrrole biosynthetic process;0.0121098797506599!GO:0004177;aminopeptidase activity;0.0124986579669042!GO:0016125;sterol metabolic process;0.0126739922993454!GO:0009892;negative regulation of metabolic process;0.0128698828982045!GO:0016363;nuclear matrix;0.0130992843046188!GO:0030119;AP-type membrane coat adaptor complex;0.0132630619426859!GO:0005869;dynactin complex;0.013316365967948!GO:0006644;phospholipid metabolic process;0.013423289636279!GO:0006497;protein amino acid lipidation;0.0138282823789277!GO:0008154;actin polymerization and/or depolymerization;0.0139634611858334!GO:0035258;steroid hormone receptor binding;0.0140009509884451!GO:0051348;negative regulation of transferase activity;0.0140033869278296!GO:0006383;transcription from RNA polymerase III promoter;0.0140416621204798!GO:0031072;heat shock protein binding;0.014230502596026!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0143162809315524!GO:0000059;protein import into nucleus, docking;0.0144254342142952!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0149365669129995!GO:0016301;kinase activity;0.0150780058704572!GO:0003756;protein disulfide isomerase activity;0.0150780058704572!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0150780058704572!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0151629417615275!GO:0051168;nuclear export;0.0158563290137632!GO:0000082;G1/S transition of mitotic cell cycle;0.0160844336921886!GO:0035035;histone acetyltransferase binding;0.0162144021138378!GO:0003684;damaged DNA binding;0.0162920712399908!GO:0005100;Rho GTPase activator activity;0.0164046164525734!GO:0004674;protein serine/threonine kinase activity;0.0164305667410495!GO:0006790;sulfur metabolic process;0.0167323415110647!GO:0045926;negative regulation of growth;0.0172984116484537!GO:0015631;tubulin binding;0.0174765067767435!GO:0051287;NAD binding;0.0177752605188003!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0178037419684863!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0181552694327384!GO:0006595;polyamine metabolic process;0.0184416163753215!GO:0031272;regulation of pseudopodium formation;0.0184416163753215!GO:0031269;pseudopodium formation;0.0184416163753215!GO:0031344;regulation of cell projection organization and biogenesis;0.0184416163753215!GO:0031268;pseudopodium organization and biogenesis;0.0184416163753215!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0184416163753215!GO:0031274;positive regulation of pseudopodium formation;0.0184416163753215!GO:0007021;tubulin folding;0.0185009106208715!GO:0006289;nucleotide-excision repair;0.0186817726307218!GO:0030131;clathrin adaptor complex;0.019019242096032!GO:0030145;manganese ion binding;0.0190503135780423!GO:0005657;replication fork;0.0192031417088862!GO:0031663;lipopolysaccharide-mediated signaling pathway;0.0197871646994044!GO:0008033;tRNA processing;0.0197871646994044!GO:0016272;prefoldin complex;0.0204360614624889!GO:0030663;COPI coated vesicle membrane;0.0206065069891137!GO:0030126;COPI vesicle coat;0.0206065069891137!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0206209423563252!GO:0050662;coenzyme binding;0.0207295328618338!GO:0048660;regulation of smooth muscle cell proliferation;0.0207758563199275!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0209347721002409!GO:0000428;DNA-directed RNA polymerase complex;0.0209347721002409!GO:0006506;GPI anchor biosynthetic process;0.0213370418130497!GO:0004004;ATP-dependent RNA helicase activity;0.0214640056988088!GO:0006739;NADP metabolic process;0.0220365957426733!GO:0006783;heme biosynthetic process;0.0220554161984447!GO:0000118;histone deacetylase complex;0.0221533580108099!GO:0003678;DNA helicase activity;0.0222306626324162!GO:0006401;RNA catabolic process;0.0225788222055043!GO:0006082;organic acid metabolic process;0.0227197250179282!GO:0006118;electron transport;0.0227197250179282!GO:0006458;'de novo' protein folding;0.0229612646717307!GO:0051084;'de novo' posttranslational protein folding;0.0229612646717307!GO:0030833;regulation of actin filament polymerization;0.0230466992762496!GO:0050790;regulation of catalytic activity;0.023166038009406!GO:0044433;cytoplasmic vesicle part;0.0237625200893784!GO:0006733;oxidoreduction coenzyme metabolic process;0.0238256650214873!GO:0022415;viral reproductive process;0.0242619251554713!GO:0030521;androgen receptor signaling pathway;0.0246288484399234!GO:0051539;4 iron, 4 sulfur cluster binding;0.0249369702405845!GO:0048500;signal recognition particle;0.0250549626060083!GO:0043433;negative regulation of transcription factor activity;0.0251162167829938!GO:0006261;DNA-dependent DNA replication;0.0253840068025243!GO:0030125;clathrin vesicle coat;0.0259745663128065!GO:0030665;clathrin coated vesicle membrane;0.0259745663128065!GO:0033559;unsaturated fatty acid metabolic process;0.0259745663128065!GO:0006636;unsaturated fatty acid biosynthetic process;0.0259745663128065!GO:0019752;carboxylic acid metabolic process;0.0260207880389702!GO:0031901;early endosome membrane;0.0261327184205111!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0262231774151169!GO:0031625;ubiquitin protein ligase binding;0.0263457753617063!GO:0030137;COPI-coated vesicle;0.0263470388202949!GO:0043284;biopolymer biosynthetic process;0.0266331018245947!GO:0042158;lipoprotein biosynthetic process;0.0270819948294777!GO:0032508;DNA duplex unwinding;0.0274867853111407!GO:0032392;DNA geometric change;0.0274867853111407!GO:0018193;peptidyl-amino acid modification;0.0276180579551576!GO:0000123;histone acetyltransferase complex;0.0277575420277126!GO:0000209;protein polyubiquitination;0.0279919613140261!GO:0007051;spindle organization and biogenesis;0.028133588553645!GO:0008094;DNA-dependent ATPase activity;0.0285073594734472!GO:0048518;positive regulation of biological process;0.0285835646446548!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0289574929500724!GO:0030134;ER to Golgi transport vesicle;0.0292892432062753!GO:0016860;intramolecular oxidoreductase activity;0.030483080163547!GO:0050178;phenylpyruvate tautomerase activity;0.0308051104531981!GO:0045045;secretory pathway;0.0308051104531981!GO:0008538;proteasome activator activity;0.0315558218277669!GO:0009100;glycoprotein metabolic process;0.0316940020749041!GO:0006505;GPI anchor metabolic process;0.0330793066081823!GO:0030100;regulation of endocytosis;0.0335555094852154!GO:0015035;protein disulfide oxidoreductase activity;0.0338069164263336!GO:0005975;carbohydrate metabolic process;0.0338448467977776!GO:0022408;negative regulation of cell-cell adhesion;0.0339369778977328!GO:0019887;protein kinase regulator activity;0.0344136247945514!GO:0000287;magnesium ion binding;0.0348538374382658!GO:0045941;positive regulation of transcription;0.035453854320221!GO:0030127;COPII vesicle coat;0.035901943938843!GO:0012507;ER to Golgi transport vesicle membrane;0.035901943938843!GO:0042157;lipoprotein metabolic process;0.035985165478103!GO:0000339;RNA cap binding;0.0363229623914205!GO:0031301;integral to organelle membrane;0.0363379517141921!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0365333912701917!GO:0006007;glucose catabolic process;0.037167346657477!GO:0009081;branched chain family amino acid metabolic process;0.0371839935675291!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0377521205144277!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0377521205144277!GO:0019207;kinase regulator activity;0.0377521205144277!GO:0051098;regulation of binding;0.0383492354861545!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0383724539518546!GO:0001953;negative regulation of cell-matrix adhesion;0.0390253484540568!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0392707648637596!GO:0016481;negative regulation of transcription;0.0398348458813483!GO:0006026;aminoglycan catabolic process;0.0406483089665452!GO:0006027;glycosaminoglycan catabolic process;0.0406483089665452!GO:0006268;DNA unwinding during replication;0.0409630045368842!GO:0005652;nuclear lamina;0.0413769214539123!GO:0006516;glycoprotein catabolic process;0.0414993392123339!GO:0000096;sulfur amino acid metabolic process;0.0416986707441558!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0418144063727012!GO:0010257;NADH dehydrogenase complex assembly;0.0418144063727012!GO:0033108;mitochondrial respiratory chain complex assembly;0.0418144063727012!GO:0005862;muscle thin filament tropomyosin;0.0431118115100827!GO:0012506;vesicle membrane;0.0431848789528006!GO:0007162;negative regulation of cell adhesion;0.0434394420144761!GO:0004192;cathepsin D activity;0.044110753186849!GO:0016408;C-acyltransferase activity;0.0444645377920927!GO:0005092;GDP-dissociation inhibitor activity;0.0444845178736916!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0444845178736916!GO:0016569;covalent chromatin modification;0.0450936325752738!GO:0008629;induction of apoptosis by intracellular signals;0.0453352906297436!GO:0009066;aspartate family amino acid metabolic process;0.0464768305937963!GO:0046822;regulation of nucleocytoplasmic transport;0.0469948175072277!GO:0043086;negative regulation of catalytic activity;0.0470812855166108!GO:0004448;isocitrate dehydrogenase activity;0.0473851531805719!GO:0043189;H4/H2A histone acetyltransferase complex;0.0475665719857939!GO:0007034;vacuolar transport;0.0479863945089823!GO:0004860;protein kinase inhibitor activity;0.048075386493394!GO:0004680;casein kinase activity;0.048679182388594!GO:0004518;nuclease activity;0.0489744042661178!GO:0048659;smooth muscle cell proliferation;0.0490213191166355!GO:0030433;ER-associated protein catabolic process;0.0490469443406946!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0490469443406946!GO:0006611;protein export from nucleus;0.0492977078716133!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0497708663744597!GO:0045047;protein targeting to ER;0.0497708663744597
|sample_id=11521
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=liver
|top_motifs=SOX{8,9,10}:1.94665030345;PAX6:1.93867597756;RXR{A,B,G}:1.84460209255;ESRRA:1.6088437943;PAX1,9:1.28557262254;PBX1:1.26255223229;TFAP4:1.25836641516;TFAP2{A,C}:1.25135207797;TLX1..3_NFIC{dimer}:1.24876727415;NR5A1,2:1.19904323453;XCPE1{core}:1.10331860998;AR:1.03792041964;TP53:0.979933717717;ALX1:0.947333985996;RBPJ:0.925766155033;ZNF423:0.878285493164;EBF1:0.864945149352;bHLH_family:0.823463366147;GATA6:0.818973972588;ETS1,2:0.80738489335;SMAD1..7,9:0.685003283494;NFATC1..3:0.664589195346;IKZF2:0.628077883415;PAX5:0.617648165769;ARID5B:0.613075212741;LEF1_TCF7_TCF7L1,2:0.603694401476;HIC1:0.596794805784;SPIB:0.551072472481;ZIC1..3:0.532075118415;CRX:0.530115053764;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.519750822675;ZNF148:0.507770013566;RXRA_VDR{dimer}:0.505460982313;HNF4A_NR2F1,2:0.500465090317;REST:0.480461860574;TFAP2B:0.4657696827;GTF2A1,2:0.46393998273;FOXQ1:0.457301106855;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.453920662452;SOX17:0.449861518521;ZBTB6:0.428767324019;GZF1:0.421621935381;SOX5:0.40792965264;SP1:0.405494020342;MTE{core}:0.367902536205;SOX2:0.348714231019;POU6F1:0.343404116088;HES1:0.340668359663;SPZ1:0.33567807969;NKX2-2,8:0.327212058928;FOX{I1,J2}:0.324249315876;ZFP161:0.321234466139;RORA:0.318312280235;TFCP2:0.305512217615;FOXM1:0.237075404743;NANOG:0.234560633778;LMO2:0.21505889367;HAND1,2:0.194112173939;TFDP1:0.138421737889;LHX3,4:0.132132425659;FOX{D1,D2}:0.123185631211;HOX{A5,B5}:0.118130569158;ESR1:0.0950853350992;TEAD1:0.0943385695855;MED-1{core}:0.0711308757013;ELF1,2,4:0.070399649679;PATZ1:0.0625236479114;STAT2,4,6:0.0569133842523;PPARG:0.056537126606;GCM1,2:0.0532469537924;IKZF1:0.0503052807038;RREB1:0.0499443278695;MYOD1:0.0485898076713;SREBF1,2:0.0439744989726;EP300:0.0392940041501;ZNF238:0.0221506911176;TAL1_TCF{3,4,12}:0.0201711053597;SPI1:0.0154037222141;ONECUT1,2:0.00167704378507;NFKB1_REL_RELA:0.000521387648136;SRF:-0.0023187967437;NKX2-3_NKX2-5:-0.00746586812344;NR3C1:-0.0176593790175;MYB:-0.0277549496668;NFY{A,B,C}:-0.040882934527;UFEwm:-0.0416692400479;NFE2:-0.0524809363276;GFI1:-0.0673068690189;TBP:-0.0724718923738;NANOG{mouse}:-0.0977278145755;FOSL2:-0.100099150823;T:-0.10200987814;E2F1..5:-0.111873736976;NFE2L2:-0.11916729127;HNF1A:-0.122533264267;GTF2I:-0.123636477109;MEF2{A,B,C,D}:-0.12632885824;HBP1_HMGB_SSRP1_UBTF:-0.126787235569;MAZ:-0.132683151296;MZF1:-0.134523606014;PAX4:-0.139202462846;NHLH1,2:-0.15343650579;CDC5L:-0.194685459914;CUX2:-0.19828755241;PAX2:-0.209342277384;POU3F1..4:-0.229141490122;EN1,2:-0.229324501497;BACH2:-0.243103854829;FOS_FOS{B,L1}_JUN{B,D}:-0.247759520877;POU1F1:-0.251569971679;EGR1..3:-0.261157925025;PRRX1,2:-0.261934146181;HMX1:-0.281037070684;GATA4:-0.296658151442;TEF:-0.297217432769;PAX8:-0.320068347657;IRF1,2:-0.324823155257;NR6A1:-0.34175547089;GFI1B:-0.358263394476;SNAI1..3:-0.374220462302;MTF1:-0.379158506327;HLF:-0.38483062739;ZNF143:-0.385438647383;PRDM1:-0.388656919409;HOXA9_MEIS1:-0.39664393706;POU2F1..3:-0.408144436119;FOXL1:-0.411801797824;FOX{F1,F2,J1}:-0.432164253452;GLI1..3:-0.436440873975;PAX3,7:-0.436857818681;PITX1..3:-0.438785945286;TOPORS:-0.443685746819;RFX1:-0.477772169299;YY1:-0.537448755849;NRF1:-0.560096211267;ATF6:-0.564435045267;CREB1:-0.570947920772;KLF4:-0.580298959822;HOX{A6,A7,B6,B7}:-0.58260645491;ADNP_IRX_SIX_ZHX:-0.588993473311;NFE2L1:-0.598727258119;IRF7:-0.603046324627;FOXP3:-0.630485445171;MYFfamily:-0.651516740362;STAT1,3:-0.652622310517;JUN:-0.654114924;FOXA2:-0.661005911261;BREu{core}:-0.670937984348;NR1H4:-0.671763291217;HMGA1,2:-0.677087823005;ATF2:-0.694241454304;OCT4_SOX2{dimer}:-0.711557536351;POU5F1:-0.736112361307;TGIF1:-0.740382591715;RUNX1..3:-0.743346415676;XBP1:-0.748611843749;NKX3-2:-0.750659020861;ZEB1:-0.751240600878;DMAP1_NCOR{1,2}_SMARC:-0.76329293761;FOXO1,3,4:-0.775766561011;NFIX:-0.820703839584;CEBPA,B_DDIT3:-0.832261987438;PDX1:-0.870450971559;MAFB:-0.872999018447;AHR_ARNT_ARNT2:-0.87623435299;AIRE:-0.883152999345;FOXP1:-0.89372262109;RFX2..5_RFXANK_RFXAP:-0.898763040427;VSX1,2:-0.917468768468;EVI1:-0.925399124511;ATF4:-0.967278717415;FOXN1:-1.03075949907;STAT5{A,B}:-1.0879992656;ZNF384:-1.09388516703;ALX4:-1.11341945989;HOX{A4,D4}:-1.12870793678;NFIL3:-1.13942121099;NKX2-1,4:-1.15807403042;ZBTB16:-1.23006442762;BPTF:-1.26451715029;TBX4,5:-1.29412046485;CDX1,2,4:-1.31110477294;DBP:-1.31702666109;FOXD3:-1.34755235614;TLX2:-1.36965016997;ATF5_CREB3:-1.42775521313;MYBL2:-1.43873855148;ELK1,4_GABP{A,B1}:-1.44748804304;NKX6-1,2:-1.59530588802;HIF1A:-1.60676619399;NKX3-1:-1.61995460293;HSF1,2:-1.63331355366
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11521-119H9;search_select_hide=table117:FF:11521-119H9
}}
}}

Latest revision as of 18:06, 4 June 2020

Name:Hepatic Sinusoidal Endothelial Cells, donor1
Species:Human (Homo sapiens)
Library ID:CNhs12075
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueliver
dev stageNA
sexNA
ageNA
cell typehepatic sinusoidal endothelial cell
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberlot:1253
catalog numberSC5005
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004997
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12075 CAGE DRX008301 DRR009173
Accession ID Hg19

Library idBAMCTSS
CNhs12075 DRZ000598 DRZ001983
Accession ID Hg38

Library idBAMCTSS
CNhs12075 DRZ011948 DRZ013333
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004997
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10014.ACAGTG sRNA-Seq DRX037229 DRR041595
Accession ID Hg19

Library idBAMCTSS
SRhi10014.ACAGTG DRZ007237


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.113
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.0771
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen1.255
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.24
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0207
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.315
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.18
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.101
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0441
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.394
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.318
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.24
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12075

Jaspar motifP-value
MA0002.20.838
MA0003.10.275
MA0004.10.332
MA0006.10.166
MA0007.10.00183
MA0009.10.771
MA0014.10.641
MA0017.10.0459
MA0018.22.46728e-4
MA0019.10.09
MA0024.10.107
MA0025.10.151
MA0027.10.321
MA0028.18.18871e-4
MA0029.10.267
MA0030.10.69
MA0031.10.681
MA0035.25.26018e-6
MA0038.10.564
MA0039.20.701
MA0040.10.203
MA0041.10.145
MA0042.10.685
MA0043.15.46264e-5
MA0046.10.161
MA0047.20.0911
MA0048.10.73
MA0050.10.445
MA0051.10.802
MA0052.10.466
MA0055.10.334
MA0057.10.432
MA0058.10.137
MA0059.10.872
MA0060.10.211
MA0061.10.562
MA0062.21.08792e-4
MA0065.20.106
MA0066.10.0496
MA0067.10.187
MA0068.10.681
MA0069.10.0235
MA0070.10.0611
MA0071.10.023
MA0072.10.862
MA0073.10.533
MA0074.10.426
MA0076.13.70713e-6
MA0077.17.2592e-5
MA0078.10.00105
MA0079.20.227
MA0080.20.00104
MA0081.10.437
MA0083.10.277
MA0084.10.792
MA0087.10.234
MA0088.10.981
MA0090.10.458
MA0091.10.248
MA0092.10.856
MA0093.10.303
MA0099.20.372
MA0100.10.221
MA0101.10.175
MA0102.23.64906e-5
MA0103.10.771
MA0104.20.404
MA0105.10.914
MA0106.10.0079
MA0107.10.181
MA0108.20.576
MA0111.10.771
MA0112.20.348
MA0113.10.148
MA0114.10.274
MA0115.10.974
MA0116.10.718
MA0117.10.0491
MA0119.10.126
MA0122.10.197
MA0124.10.681
MA0125.10.937
MA0131.10.0814
MA0135.10.0682
MA0136.10.351
MA0137.20.102
MA0138.20.0717
MA0139.10.204
MA0140.10.0274
MA0141.11.36549e-4
MA0142.10.936
MA0143.10.962
MA0144.10.665
MA0145.10.283
MA0146.10.0966
MA0147.10.416
MA0148.10.0192
MA0149.10.0512
MA0150.10.889
MA0152.10.502
MA0153.10.525
MA0154.10.313
MA0155.10.00492
MA0156.10.955
MA0157.10.575
MA0159.10.195
MA0160.10.0102
MA0162.10.162
MA0163.10.448
MA0164.10.375
MA0258.10.262
MA0259.10.314



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12075

Novel motifP-value
10.944
100.566
1000.926
1010.352
1020.266
1030.266
1040.974
1050.23
1060.1
1070.0134
1080.249
1090.302
110.0466
1100.0296
1110.992
1120.516
1130.528
1140.433
1150.602
1160.627
1170.817
1180.465
1190.0822
120.666
1200.0384
1210.929
1220.681
1230.397
1240.501
1250.763
1260.613
1270.506
1280.0782
1290.154
130.462
1300.669
1310.111
1320.108
1330.228
1340.72
1350.453
1360.646
1370.216
1380.796
1390.825
140.73
1400.959
1410.357
1420.621
1430.0976
1440.431
1450.117
1460.203
1470.536
1480.19
1490.0285
150.429
1500.294
1510.682
1520.0758
1530.075
1540.165
1550.743
1560.529
1570.524
1580.869
1590.8
160.485
1600.00547
1610.903
1620.182
1630.384
1640.797
1650.448
1660.0942
1670.0693
1680.268
1690.0326
170.298
180.911
190.0981
20.252
200.695
210.939
220.102
230.18
240.713
250.631
260.416
270.0477
280.506
290.767
30.687
300.357
310.489
320.291
330.253
340.0258
350.755
360.404
370.534
380.109
390.321
40.457
400.0176
410.0213
420.88
430.538
440.417
450.131
460.204
470.623
480.238
490.604
50.901
500.691
510.24
520.581
530.775
540.345
550.981
560.491
570.524
580.636
590.0323
60.382
600.336
610.879
620.668
630.516
640.193
650.0261
660.644
670.65
680.249
690.852
70.62
700.545
710.745
720.559
730.0513
740.184
750.486
760.329
770.0253
780.509
790.267
80.0195
800.409
810.768
820.146
830.661
840.138
850.111
860.936
870.347
880.745
890.267
90.164
900.157
910.271
920.249
930.597
940.717
950.177
960.319
970.329
980.525
990.0393



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12075


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000181 (metabolising cell)
0000417 (endopolyploid cell)
0000668 (parenchymal cell)
0000215 (barrier cell)
0000412 (polyploid cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0000182 (hepatocyte)
0002262 (endothelial cell of sinusoid)
1000398 (endothelial cell of hepatic sinusoid)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002107 (liver)
0002100 (trunk)
0000483 (epithelium)
0000479 (tissue)
0001007 (digestive system)
0000055 (vessel)
0001281 (hepatic sinusoid)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0005911 (endo-epithelium)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0000353 (parenchyma)
0003497 (abdomen blood vessel)
0003909 (sinusoid)
0005177 (trunk region element)
0002365 (exocrine gland)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0005172 (abdomen element)
0006925 (digestive gland)
0002049 (vasculature)
0002530 (gland)
0003835 (abdominal segment blood vessel)
0003513 (trunk blood vessel)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0005173 (abdominal segment element)
0004535 (cardiovascular system)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0001280 (liver parenchyma)
0004647 (liver lobule)
0002330 (exocrine system)
0004537 (blood vasculature)
0000916 (abdomen)
0002423 (hepatobiliary system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000076 (hepatic sinusoidal endothelial cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000222 (mesodermal cell)
CL:0000223 (endodermal cell)

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