FFCP PHASE1:Hg19::chr10:114206956..114207040,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=143187 | |EntrezGene=143187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17792 | |HGNC=17792 | ||
|TSSclassifier=strong | |||
|UniProt=Q96AJ9 | |UniProt=Q96AJ9 | ||
|association_with_transcript=0bp_to_ENST00000393077,ENST00000432306,ENST00000489142,ENST00000494728,ENST00000496445_5end | |association_with_transcript=0bp_to_ENST00000393077,ENST00000432306,ENST00000489142,ENST00000494728,ENST00000496445_5end | ||
|cluster_id=chr10:114206956..114207040,+ | |||
|coexpression_cluster_id=C612 | |||
|description=CAGE_peak_1_at_VTI1A_5end | |description=CAGE_peak_1_at_VTI1A_5end | ||
|id=chr10:114206956..114207040,+ | |id=chr10:114206956..114207040,+ | ||
|ontology_enrichment_celltype=CL:0000738!8.94e-42!140;CL:0000037!3.44e-35!172;CL:0000566!3.44e-35!172;CL:0002031!3.80e-32!124;CL:0002032!4.94e-32!165;CL:0000837!4.94e-32!165;CL:0002087!5.01e-31!119;CL:0000988!2.49e-30!182;CL:0000766!1.31e-22!76;CL:0000557!2.11e-19!71;CL:0000763!1.31e-18!112;CL:0000049!1.31e-18!112;CL:0000839!2.37e-18!70;CL:0002009!1.15e-17!65;CL:0002057!1.95e-17!42;CL:0002194!8.20e-17!63;CL:0000576!8.20e-17!63;CL:0000040!8.20e-17!63;CL:0000559!8.20e-17!63;CL:0000860!2.28e-15!45;CL:0000542!1.15e-12!53;CL:0000051!1.15e-12!53;CL:0000838!1.25e-12!52;CL:0000791!9.03e-10!18;CL:0000789!9.03e-10!18;CL:0002420!9.03e-10!18;CL:0002419!9.03e-10!18;CL:0000790!9.03e-10!18;CL:0000084!1.83e-07!25;CL:0000827!1.83e-07!25 | |ontology_enrichment_celltype=CL:0000738!8.94e-42!140;CL:0000037!3.44e-35!172;CL:0000566!3.44e-35!172;CL:0002031!3.80e-32!124;CL:0002032!4.94e-32!165;CL:0000837!4.94e-32!165;CL:0002087!5.01e-31!119;CL:0000988!2.49e-30!182;CL:0000766!1.31e-22!76;CL:0000557!2.11e-19!71;CL:0000763!1.31e-18!112;CL:0000049!1.31e-18!112;CL:0000839!2.37e-18!70;CL:0002009!1.15e-17!65;CL:0002057!1.95e-17!42;CL:0002194!8.20e-17!63;CL:0000576!8.20e-17!63;CL:0000040!8.20e-17!63;CL:0000559!8.20e-17!63;CL:0000860!2.28e-15!45;CL:0000542!1.15e-12!53;CL:0000051!1.15e-12!53;CL:0000838!1.25e-12!52;CL:0000791!9.03e-10!18;CL:0000789!9.03e-10!18;CL:0002420!9.03e-10!18;CL:0002419!9.03e-10!18;CL:0000790!9.03e-10!18;CL:0000084!1.83e-07!25;CL:0000827!1.83e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-12;33!CL:0002057;1.46e-12;33!CL:0000576;2.81e-11;48!CL:0000473;4.16e-11;39!CL:0000234;4.16e-11;39!CL:0000766;7.45e-11;69!CL:0002087;5.34e-10;104!CL:0000791;9.10e-10;18!CL:0000789;9.10e-10;18!CL:0002419;9.10e-10;18!CL:0000738;2.90e-09;136!CL:0000542;1.07e-07;53!CL:0000084;1.98e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.15e-43,136;CL:0000037,1.39e-36,168;CL:0002031,7.43e-34,120;CL:0002032,2.24e-33,161;CL:0000837,2.24e-33,161;CL:0002087,9.52e-33,115;CL:0000988,2.81e-32,177;CL:0000766,1.48e-24,72;CL:0000557,3.21e-21,67;CL:0000839,4.14e-20,66;CL:0000763,8.06e-20,108;CL:0000049,8.06e-20,108;CL:0002009,1.78e-19,61;CL:0002194,1.35e-18,59;CL:0000576,1.35e-18,59;CL:0000040,1.35e-18,59;CL:0000559,1.35e-18,59;CL:0000473,5.18e-18,48;CL:0000234,5.18e-18,48;CL:0000860,1.95e-17,42;CL:0002057,1.95e-17,42;CL:0000542,1.15e-12,53;CL:0000051,1.15e-12,53;CL:0000838,1.25e-12,52;CL:0000791,9.03e-10,18;CL:0000789,9.03e-10,18;CL:0002420,9.03e-10,18;CL:0002419,9.03e-10,18;CL:0000790,9.03e-10,18;CL:0000084,1.83e-07,25;CL:0000827,1.83e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;8.35e-13;42!CL:0000790;9.10e-10;18!CL:0000051;1.07e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.72e-22!102;UBERON:0003061!1.72e-22!102;UBERON:0007023!5.27e-22!115;UBERON:0002193!2.06e-19!112;UBERON:0002371!6.67e-16!80;UBERON:0001474!4.72e-14!86;UBERON:0001049!1.01e-13!57;UBERON:0005068!1.01e-13!57;UBERON:0006241!1.01e-13!57;UBERON:0007135!1.01e-13!57;UBERON:0003080!5.48e-13!42;UBERON:0002780!5.74e-13!41;UBERON:0001890!5.74e-13!41;UBERON:0006240!5.74e-13!41;UBERON:0001893!4.42e-11!34;UBERON:0004765!5.66e-11!101;UBERON:0001434!5.66e-11!101;UBERON:0002405!7.48e-11!115;UBERON:0002020!7.89e-11!34;UBERON:0003528!7.89e-11!34;UBERON:0002791!1.06e-10!33;UBERON:0001869!1.24e-10!32;UBERON:0002616!1.39e-10!59;UBERON:0000955!4.46e-10!69;UBERON:0006238!4.46e-10!69;UBERON:0002619!6.87e-10!22;UBERON:0001017!1.41e-09!82;UBERON:0001950!4.92e-09!20;UBERON:0000073!1.44e-08!94;UBERON:0001016!1.44e-08!94;UBERON:0005743!1.90e-08!86;UBERON:0000956!4.04e-08!25;UBERON:0000203!4.04e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.77e-10;22!UBERON:0002780;9.45e-10;41!UBERON:0001890;9.45e-10;41!UBERON:0001869;1.19e-09;32!UBERON:0002791;1.59e-09;32!UBERON:0001893;2.07e-09;34!UBERON:0003528;2.17e-09;34!UBERON:0002020;2.17e-09;34!UBERON:0001950;4.80e-09;20!UBERON:0000956;3.95e-08;25!UBERON:0000203;3.95e-08;25!UBERON:0000073;9.79e-08;53!UBERON:0002616;9.79e-08;53!UBERON:0007023;4.04e-07;114 | |||
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| ||
|short_description=p1@VTI1A | |short_description=p1@VTI1A | ||
}} | }} |
Latest revision as of 10:51, 16 September 2015
Short description: | p1@VTI1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VTI1A_5end |
Coexpression cluster: | C612_Neutrophils_Eosinophils_granulocyte_CD14_CD4_acute_CD19 |
Association with transcript: | 0bp_to_ENST00000393077, ENST00000432306, ENST00000489142, ENST00000494728, ENST00000496445_5end |
EntrezGene: | VTI1A |
HGNC: | 17792 |
UniProt: | Q96AJ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.24e-24 | 98 |
blood island | 5.24e-24 | 98 |
adult organism | 1.33e-21 | 114 |
hemolymphoid system | 1.15e-20 | 108 |
bone marrow | 2.66e-17 | 76 |
immune system | 2.65e-16 | 93 |
bone element | 3.01e-15 | 82 |
neural tube | 1.13e-13 | 56 |
neural rod | 1.13e-13 | 56 |
future spinal cord | 1.13e-13 | 56 |
neural keel | 1.13e-13 | 56 |
regional part of forebrain | 5.74e-13 | 41 |
forebrain | 5.74e-13 | 41 |
anterior neural tube | 5.74e-13 | 41 |
future forebrain | 5.74e-13 | 41 |
regional part of nervous system | 9.12e-13 | 53 |
regional part of brain | 9.12e-13 | 53 |
skeletal element | 6.96e-12 | 90 |
telencephalon | 4.42e-11 | 34 |
brain grey matter | 7.89e-11 | 34 |
gray matter | 7.89e-11 | 34 |
cerebral hemisphere | 1.24e-10 | 32 |
skeletal system | 1.79e-10 | 100 |
regional part of telencephalon | 1.86e-10 | 32 |
brain | 5.32e-10 | 68 |
future brain | 5.32e-10 | 68 |
regional part of cerebral cortex | 6.87e-10 | 22 |
nervous system | 1.48e-09 | 89 |
central nervous system | 1.70e-09 | 81 |
neocortex | 4.92e-09 | 20 |
cerebral cortex | 4.04e-08 | 25 |
pallium | 4.04e-08 | 25 |
neural plate | 5.04e-07 | 82 |
presumptive neural plate | 5.04e-07 | 82 |