FFCP PHASE1:Hg19::chr10:13141585..13141600,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10133 | |EntrezGene=10133 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17142 | |HGNC=17142 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000378764_5end | |association_with_transcript=3bp_to_ENST00000378764_5end | ||
|cluster_id=chr10:13141585..13141600,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_9_at_OPTN_5end | |description=CAGE_peak_9_at_OPTN_5end | ||
|id=chr10:13141585..13141600,+ | |id=chr10:13141585..13141600,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.54e-18;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.56e-52!57;UBERON:0005068!2.56e-52!57;UBERON:0006241!2.56e-52!57;UBERON:0007135!2.56e-52!57;UBERON:0001017!2.57e-46!82;UBERON:0000955!6.02e-46!69;UBERON:0006238!6.02e-46!69;UBERON:0002616!2.44e-44!59;UBERON:0005743!1.22e-43!86;UBERON:0000073!1.95e-40!94;UBERON:0001016!1.95e-40!94;UBERON:0002780!1.86e-39!41;UBERON:0001890!1.86e-39!41;UBERON:0006240!1.86e-39!41;UBERON:0001893!2.15e-38!34;UBERON:0003080!2.41e-38!42;UBERON:0002020!2.43e-38!34;UBERON:0003528!2.43e-38!34;UBERON:0001869!5.14e-38!32;UBERON:0002791!3.65e-36!33;UBERON:0003075!3.38e-35!86;UBERON:0007284!3.38e-35!86;UBERON:0002619!7.47e-35!22;UBERON:0001950!1.87e-34!20;UBERON:0002346!3.79e-33!90;UBERON:0007023!4.47e-32!115;UBERON:0000956!3.38e-30!25;UBERON:0000203!3.38e-30!25;UBERON:0003056!4.37e-24!61;UBERON:0000033!5.53e-24!123;UBERON:0000153!1.29e-23!129;UBERON:0007811!1.29e-23!129;UBERON:0004121!1.06e-20!169;UBERON:0000924!6.07e-20!173;UBERON:0006601!6.07e-20!173;UBERON:0000200!1.69e-16!6;UBERON:0003076!1.30e-14!15;UBERON:0003057!1.30e-14!15;UBERON:0001871!4.71e-12!7;UBERON:0004733!7.25e-12!12;UBERON:0002028!7.25e-12!12;UBERON:0007277!7.25e-12!12;UBERON:0004732!7.69e-11!13;UBERON:0002298!1.68e-10!8;UBERON:0002420!4.97e-10!9;UBERON:0007245!4.97e-10!9;UBERON:0010009!4.97e-10!9;UBERON:0010011!4.97e-10!9;UBERON:0000454!4.97e-10!9;UBERON:0000025!9.10e-10!194;UBERON:0002308!1.51e-09!9;UBERON:0000125!1.51e-09!9;UBERON:0002021!2.74e-09!5;UBERON:0001872!4.04e-09!5;UBERON:0002771!5.37e-09!3;UBERON:0000349!5.49e-09!5;UBERON:0000988!4.08e-08!3;UBERON:0001896!8.25e-08!3;UBERON:0005290!8.25e-08!3;UBERON:0010096!8.25e-08!3;UBERON:0004111!1.14e-07!241;UBERON:0000064!7.46e-07!219;UBERON:0001870!9.09e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.39e-91;20!UBERON:0002619;2.21e-83;22!UBERON:0000956;1.91e-73;25!UBERON:0000203;1.91e-73;25!UBERON:0001869;2.00e-72;32!UBERON:0001893;7.04e-70;34!UBERON:0002791;4.63e-64;32!UBERON:0003528;8.46e-61;34!UBERON:0002020;8.46e-61;34!UBERON:0000200;3.80e-46;6!UBERON:0002780;1.28e-40;41!UBERON:0001890;1.28e-40;41!UBERON:0000073;1.59e-27;53!UBERON:0002616;1.59e-27;53!UBERON:0000955;5.10e-26;68!UBERON:0001017;1.60e-25;75!UBERON:0002021;3.17e-25;5!UBERON:0001872;1.06e-24;5!UBERON:0001870;4.57e-24;3!UBERON:0001871;2.69e-18;6!UBERON:0002771;8.21e-17;2!UBERON:0001016;8.94e-17;83!UBERON:0002702;1.67e-16;2!UBERON:0007023;6.18e-11;114!UBERON:0002022;2.50e-09;1!UBERON:0002581;4.36e-09;1!UBERON:0002902;4.36e-09;1!UBERON:0001882;4.36e-09;1!UBERON:0003112;4.36e-09;1!UBERON:0011158;4.36e-09;1!UBERON:0009899;4.36e-09;1!UBERON:0007190;4.36e-09;1!UBERON:0003128;4.36e-09;1!UBERON:0005403;4.36e-09;1!UBERON:0001703;4.36e-09;1!UBERON:0002241;4.36e-09;1!UBERON:0000369;1.57e-08;4!UBERON:0002435;1.57e-08;4!UBERON:0000204;1.57e-08;4!UBERON:0011216;1.83e-08;132!UBERON:0002420;2.63e-08;9!UBERON:0007245;2.63e-08;9!UBERON:0010009;2.63e-08;9!UBERON:0010011;2.63e-08;9!UBERON:0000454;2.63e-08;9!UBERON:0000349;3.01e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.48e-91,20;UBERON:0002619,2.34e-83,22;UBERON:0001869,3.74e-81,32;UBERON:0001893,2.47e-76,34;UBERON:0000956,2.02e-73,25;UBERON:0000203,2.02e-73,25;UBERON:0002791,1.27e-72,32;UBERON:0003528,2.69e-68,34;UBERON:0002020,2.69e-68,34;UBERON:0002780,4.48e-63,41;UBERON:0001890,4.48e-63,41;UBERON:0003080,4.48e-63,41;UBERON:0006240,4.48e-63,41;UBERON:0000955,2.11e-54,68;UBERON:0006238,2.11e-54,68;UBERON:0000073,1.29e-53,53;UBERON:0002616,1.29e-53,53;UBERON:0001049,1.29e-50,56;UBERON:0005068,1.29e-50,56;UBERON:0006241,1.29e-50,56;UBERON:0007135,1.29e-50,56;UBERON:0001017,1.13e-49,81;UBERON:0000200,5.63e-46,6;UBERON:0001016,1.89e-44,89;UBERON:0003056,1.14e-41,61;UBERON:0003075,1.11e-33,82;UBERON:0007284,1.11e-33,82;UBERON:0007023,4.19e-32,114;UBERON:0002346,5.65e-32,86;UBERON:0010371,6.84e-26,104;UBERON:0002021,3.08e-25,5;UBERON:0001872,9.99e-25,5;UBERON:0001870,6.26e-24,3;UBERON:0010314,6.08e-22,132;UBERON:0004121,1.08e-21,171;UBERON:0000924,1.08e-21,171;UBERON:0006601,1.08e-21,171;UBERON:0001871,2.58e-18,6;UBERON:0011216,2.52e-17,223;UBERON:0002771,1.17e-16,2;UBERON:0002702,2.03e-16,2;UBERON:0000025,1.91e-12,192;UBERON:0002022,2.40e-09,1;UBERON:0004111,3.09e-09,240;UBERON:0007190,3.58e-09,1;UBERON:0002581,4.54e-09,1;UBERON:0002902,4.91e-09,1;UBERON:0009899,4.91e-09,1;UBERON:0001882,5.31e-09,1;UBERON:0005403,5.31e-09,1;UBERON:0003112,6.22e-09,1;UBERON:0011158,6.22e-09,1;UBERON:0003128,6.22e-09,1;UBERON:0001703,6.22e-09,1;UBERON:0002241,6.22e-09,1;UBERON:0004761,6.22e-09,1;UBERON:0009617,6.22e-09,1;UBERON:0000369,1.64e-08,4;UBERON:0002435,1.64e-08,4;UBERON:0000204,1.64e-08,4;UBERON:0010082,1.64e-08,4;UBERON:0002420,2.63e-08,9;UBERON:0007245,2.63e-08,9;UBERON:0010009,2.63e-08,9;UBERON:0010011,2.63e-08,9;UBERON:0000454,2.63e-08,9;UBERON:0000349,3.16e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,4.97073823883149,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,2.96857914117924,1.99613798001194,0,0,0,0,0,0,0,0,0,1.77148277162768,0.361789315876224,0,0.331737779793674,0.295547618953547,3.51016635446356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48209377757333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,3.58422384282346,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,4.27091927156871,1.1267183763585,0.573409195690071,0.221858103073705,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,2.24802287837608,7.08482881627925,1.59633859057151,3.69209455633359,0,2.28218933131919,2.09918339321406,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,2.76904096935418,1.56215619722769,2.68692835451539,2.66346402814409,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,1.08751572762931,2.63091094251396,0.236387681767936,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,2.99162556840025,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,4.97073823883149,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,2.96857914117924,1.99613798001194,0,0,0,0,0,0,0,0,0,1.77148277162768,0.361789315876224,0,0.331737779793674,0.295547618953547,3.51016635446356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48209377757333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,3.58422384282346,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43034089983493,4.27091927156871,1.1267183763585,0.573409195690071,0.221858103073705,0.124192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,2.24802287837608,7.08482881627925,1.59633859057151,3.69209455633359,0,2.28218933131919,2.09918339321406,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,2.76904096935418,1.56215619722769,2.68692835451539,2.66346402814409,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,1.08751572762931,2.63091094251396,0.236387681767936,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,2.99162556840025,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@OPTN | |short_description=p9@OPTN | ||
}} | }} |
Latest revision as of 02:43, 17 September 2015
Short description: | p9@OPTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_OPTN_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 3bp_to_ENST00000378764_5end |
EntrezGene: | OPTN |
HGNC: | 17142 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data