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FFCP PHASE1:Mm9::chr1:87802991..87803007,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=64294
|EntrezGene=64294
|HGNC=
|HGNC=
|MCL_coexpression_id=1759
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=255bp_to_ENSMUST00000139837_5end
|association_with_transcript=255bp_to_ENSMUST00000139837_5end
|cluster_id=chr1:87802991..87803007,+
|description=CAGE_peak_2_at_Itm2c_5end
|description=CAGE_peak_2_at_Itm2c_5end
|id=chr1:87802991..87803007,+
|id=chr1:87802991..87803007,+
|ontology_enrichment_celltype=CL:0000055!3.46e-09!50;CL:0000221!2.05e-07!44;CL:0000133!2.05e-07!44;CL:0002319!3.82e-07!43
|ontology_enrichment_celltype_v019_2=CL:0002453,5.98e-17,8;CL:0000333,2.81e-13,10;CL:0000095,2.81e-13,10;CL:0000243,2.81e-13,10;CL:0000123,2.81e-13,10;CL:0000125,2.81e-13,10;CL:0000030,2.81e-13,10;CL:0000339,2.81e-13,10;CL:0002321,5.86e-13,70;CL:0002319,8.56e-13,43;CL:0000221,2.09e-12,44;CL:0000133,2.09e-12,44;CL:0000128,2.66e-12,6;CL:0000126,2.66e-12,6;CL:0000127,2.66e-12,6;CL:0000393,1.75e-09,39;CL:0000211,1.75e-09,39;CL:0000680,6.04e-09,6;CL:0000187,6.04e-09,6;CL:0000056,6.04e-09,6;CL:0002092,2.38e-08,3;CL:0002540,2.38e-08,3;CL:0002614,4.32e-08,3;CL:0000723,5.68e-08,91;CL:0000048,5.68e-08,91;CL:0000222,1.29e-07,7;CL:0002494,2.28e-07,3;CL:0000737,2.28e-07,3;CL:0000746,2.28e-07,3;CL:0000513,2.28e-07,3;CL:0000034,3.73e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.98e-16!73;UBERON:0005743!4.98e-16!73;UBERON:0000073!6.27e-15!75;UBERON:0001016!6.27e-15!75;UBERON:0001049!3.32e-14!52;UBERON:0005068!3.32e-14!52;UBERON:0006241!3.32e-14!52;UBERON:0007135!3.32e-14!52;UBERON:0002346!1.82e-12!71;UBERON:0003075!1.82e-12!71;UBERON:0007284!1.82e-12!71;UBERON:0000955!2.42e-12!50;UBERON:0006238!2.42e-12!50;UBERON:0004121!4.14e-12!102;UBERON:0000924!4.14e-12!102;UBERON:0006601!4.14e-12!102;UBERON:0002616!4.34e-12!49;UBERON:0002020!1.39e-11!34;UBERON:0000033!1.10e-10!63;UBERON:0003080!4.56e-10!40;UBERON:0002780!1.26e-09!39;UBERON:0001890!1.26e-09!39;UBERON:0006240!1.26e-09!39;UBERON:0002791!3.40e-09!29;UBERON:0003528!3.40e-09!29;UBERON:0001893!3.40e-09!29;UBERON:0007811!2.52e-08!86;UBERON:0003056!6.11e-08!49;UBERON:0002021!6.47e-08!10;UBERON:0000411!6.47e-08!10;UBERON:0001950!6.47e-08!10;UBERON:0004111!1.15e-07!122;UBERON:0000153!3.42e-07!94;UBERON:0002619!6.64e-07!17;UBERON:0000956!9.44e-07!21;UBERON:0001869!9.44e-07!21;UBERON:0000203!9.44e-07!21;UBERON:0000025!9.87e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.35e-20,10;UBERON:0000411,1.35e-20,10;UBERON:0001950,1.35e-20,10;UBERON:0001017,7.93e-18,73;UBERON:0001016,3.56e-17,75;UBERON:0002619,1.83e-16,17;UBERON:0002020,2.66e-15,34;UBERON:0003528,2.48e-14,29;UBERON:0002791,2.48e-14,29;UBERON:0001893,2.48e-14,29;UBERON:0000073,2.04e-13,54;UBERON:0000956,8.04e-13,21;UBERON:0001869,8.04e-13,21;UBERON:0000203,8.04e-13,21;UBERON:0004121,3.55e-12,95;UBERON:0000924,3.55e-12,95;UBERON:0006601,3.55e-12,95;UBERON:0001049,4.24e-11,52;UBERON:0005068,4.24e-11,52;UBERON:0006241,4.24e-11,52;UBERON:0007135,4.24e-11,52;UBERON:0002616,3.13e-10,46;UBERON:0000955,6.26e-10,47;UBERON:0006238,6.26e-10,47;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.98e-09,40;UBERON:0002346,3.38e-08,64;UBERON:0003075,3.38e-08,64;UBERON:0007284,3.38e-08,64;UBERON:0002038,4.32e-08,3;UBERON:0009663,4.32e-08,3;UBERON:0009661,4.32e-08,3;UBERON:0000125,4.32e-08,3;UBERON:0002308,4.32e-08,3;UBERON:0003056,4.38e-07,49
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0.645616617207881,0.281577444303333,0.468129052643987,0,0,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.595303031057488,0,0,0.319984845586813,0,0,0,0.215471232685889,0.190023419456374,0,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,1.1330713617802,1.31790010585369,0.183546752161682,1.56478268869608,1.09012578190223,1.09843091367236,4.27745777963423,1.1198913730029,1.43752564364972,0,0.725362142011344,0.336093799142464,1.80081605225163,1.43266719969378,2.06268836910977,0,1.05798195854407,1.90149421051854,1.0165335962074,4.4464739805557,3.5995988691256,4.94433181283487,7.8152812644071,6.5912024314049,19.9793518767208,0.103689612308478,0.540023753326763,0,0.856952953211411,1.10434270475807,0.122490799214954,0.0958454710182364,0,0,1.78762273319263,2.15049146558741,0.263772575460388,0.640413505216868,0.52091337055676,3.62937898701795,4.50210088025344,3.51435969886663,1.76777151284201,0.427115042397309,0.745597783301202,0,0,0.579728977403356,0,0,0,0,0,0,0.511290967734173,0.519572009205738,0,0.422530259330042,0,0,7.11066703153331,0.865964164044856,0.760079596425296,0,0.11418387971906,0,0.593768556259299,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0,0.83778682725382,0.255457055208591,0.479260498023681,0,0.127070227073065,0.748953197024114,0.457500602818626,0,0.695297280769106,0.767146371990992,0.41557608911912,0.811206315338788,0.203678727700633,0.248813941220186,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0.452114453507145,0,0,0.187403449119458,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0,0,1.40442637462647,0,0.568326998791185,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0,0,0.219550115291051,0.268412837520744,0.630869845692382,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0.754005626400808,0,0.19496408711912,0,0,0,0.189667900953082,0,1.1270773567308,0,0,0.210407459670956,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0,0.327726629431476,0,0.578596234326046,0,0,0,0.275936746304732,0.481651769963376,0.234423373184406,0.163934945376675,0,0,0,0.430846795465598,0,0.222798674082394,0,1.21443210502468,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0,0.709360934569094,0.178368817602071,0.164549020602121,0,0,0,0.661585194164886,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0.414599921413271,0,0,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0.56369293868419,0.149516546043979,0.330916980914195,0.194451188344048,0,0.337912250981556,0,0.13020438484395,0.104859344425711,0.241584120826006,0,0.316011120628178,0.202725215290164,0.513554785824136,0,0,0.198681354781265,0.120195449519969,0.295379054349154,0,0.0762068066549998,0,0,0,0,0,0,0.179427713218951,0.335769232728157,0.386379188064381,0,0.549454872801795,0.214368379079066,0,1.6942555278512,3.68260189205742,1.14579102687879,1.03111909406213,2.74033007908257,5.2877572817279,2.02506750069542,2.2516060161211,1.35942722695261,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0.532427418478012,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0.645616617207881,0.281577444303333,0.468129052643987,0,0,0.171200729931206,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.595303031057488,0,0,0.319984845586813,0,0,0,0.215471232685889,0.190023419456374,0,0.886922042621219,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,1.1330713617802,1.31790010585369,0.183546752161682,1.56478268869608,1.09012578190223,1.09843091367236,4.27745777963423,1.1198913730029,1.43752564364972,0,0.725362142011344,0.336093799142464,1.80081605225163,1.43266719969378,2.06268836910977,0,1.05798195854407,1.90149421051854,1.0165335962074,4.4464739805557,3.5995988691256,4.94433181283487,7.8152812644071,6.5912024314049,19.9793518767208,0.103689612308478,0.540023753326763,0,0.856952953211411,1.10434270475807,0.122490799214954,0.0958454710182364,0,0,1.78762273319263,2.15049146558741,0.263772575460388,0.640413505216868,0.52091337055676,3.62937898701795,4.50210088025344,3.51435969886663,1.76777151284201,0.427115042397309,0.745597783301202,0,0,0.579728977403356,0,0,0,0,0,0,0.511290967734173,0.519572009205738,0,0.422530259330042,0,0,7.11066703153331,0.865964164044856,0.760079596425296,0,0.11418387971906,0,0.593768556259299,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0,0.83778682725382,0.255457055208591,0.479260498023681,0,0.127070227073065,0.748953197024114,0.457500602818626,0,0.695297280769106,0.767146371990992,0.41557608911912,0.811206315338788,0.203678727700633,0.248813941220186,0.252722758433675,0,0.130120442962704,0.229902104433473,0,0.452114453507145,0,0,0.187403449119458,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0,0,1.40442637462647,0,0.568326998791185,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0,0,0.219550115291051,0.268412837520744,0.630869845692382,0,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0.754005626400808,0,0.19496408711912,0,0,0,0.189667900953082,0,1.1270773567308,0,0,0.210407459670956,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0,0.327726629431476,0,0.578596234326046,0,0,0,0.275936746304732,0.481651769963376,0.234423373184406,0.163934945376675,0,0,0,0.430846795465598,0,0.222798674082394,0,1.21443210502468,0,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0,0.709360934569094,0.178368817602071,0.164549020602121,0,0,0,0.661585194164886,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0.414599921413271,0,0,0.203319467126849,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0.56369293868419,0.149516546043979,0.330916980914195,0.194451188344048,0,0.337912250981556,0,0.13020438484395,0.104859344425711,0.241584120826006,0,0.316011120628178,0.202725215290164,0.513554785824136,0,0,0.198681354781265,0.120195449519969,0.295379054349154,0,0.0762068066549998,0,0,0,0,0,0,0.179427713218951,0.335769232728157,0.386379188064381,0,0.549454872801795,0.214368379079066,0,1.6942555278512,3.68260189205742,1.14579102687879,1.03111909406213,2.74033007908257,5.2877572817279,2.02506750069542,2.2516060161211,1.35942722695261,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0.532427418478012,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0
|short_description=p2@Itm2c
|short_description=p2@Itm2c
}}
}}

Latest revision as of 17:21, 1 October 2015

Short description:p2@Itm2c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Itm2c_5end
Coexpression cluster:MCL_coexpression_mm9:1759
Association with transcript: 255bp_to_ENSMUST00000139837_5end
EntrezGene:Itm2c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Itm2c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E819.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
oligodendrocyte precursor cell5.98e-178
migratory neural crest cell2.81e-1310
neuron associated cell2.81e-1310
glial cell (sensu Vertebrata)2.81e-1310
neuron associated cell (sensu Vertebrata)2.81e-1310
glial cell2.81e-1310
glioblast2.81e-1310
glioblast (sensu Vertebrata)2.81e-1310
embryonic cell5.86e-1370
neural cell8.56e-1343
ectodermal cell2.09e-1244
neurectodermal cell2.09e-1244
oligodendrocyte2.66e-126
macroglial cell2.66e-126
astrocyte2.66e-126
electrically responsive cell1.75e-0939
electrically active cell1.75e-0939
muscle precursor cell6.04e-096
muscle cell6.04e-096
myoblast6.04e-096
bone marrow cell2.38e-083
mesenchymal stem cell of the bone marrow2.38e-083
neuron of the substantia nigra4.32e-083
somatic stem cell5.68e-0891
multi fate stem cell5.68e-0891
mesodermal cell1.29e-077
cardiocyte2.28e-073
striated muscle cell2.28e-073
cardiac muscle cell2.28e-073
cardiac muscle myoblast2.28e-073
stem cell3.73e-0797

Uber anatomy
Ontology termp-valuen
occipital lobe1.35e-2010
visual cortex1.35e-2010
neocortex1.35e-2010
central nervous system7.93e-1873
nervous system3.56e-1775
regional part of cerebral cortex1.83e-1617
gray matter2.66e-1534
brain grey matter2.48e-1429
regional part of telencephalon2.48e-1429
telencephalon2.48e-1429
regional part of nervous system2.04e-1354
cerebral cortex8.04e-1321
cerebral hemisphere8.04e-1321
pallium8.04e-1321
ectoderm-derived structure3.55e-1295
ectoderm3.55e-1295
presumptive ectoderm3.55e-1295
neural tube4.24e-1152
neural rod4.24e-1152
future spinal cord4.24e-1152
neural keel4.24e-1152
regional part of brain3.13e-1046
brain6.26e-1047
future brain6.26e-1047
regional part of forebrain9.26e-1039
forebrain9.26e-1039
future forebrain9.26e-1039
anterior neural tube1.98e-0940
neurectoderm3.38e-0864
neural plate3.38e-0864
presumptive neural plate3.38e-0864
substantia nigra4.32e-083
telencephalic nucleus4.32e-083
midbrain nucleus4.32e-083
neural nucleus4.32e-083
nucleus of brain4.32e-083
pre-chordal neural plate4.38e-0749
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