FFCP PHASE1:Mm9::chr18:82753974..82753991,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:82753974..82753991,+ | |||
|description=CAGE_peak_at_chr18:82753974..82753991,+ | |description=CAGE_peak_at_chr18:82753974..82753991,+ | ||
|id=chr18:82753974..82753991,+ | |id=chr18:82753974..82753991,+ | ||
|ontology_enrichment_celltype=CL:0000221!5.30e-07!44;CL:0000133!5.30e-07!44;CL:0002614!7.68e-07!3;CL:0002610!8.73e-07!3 | |ontology_enrichment_celltype=CL:0000221!5.30e-07!44;CL:0000133!5.30e-07!44;CL:0002614!7.68e-07!3;CL:0002610!8.73e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002614,5.66e-11,3;CL:0002610,7.11e-11,3;CL:0000117,2.17e-08,23;CL:0000337,2.17e-08,23;CL:0002611,6.83e-08,2;CL:0000878,7.96e-08,2;CL:0000129,7.96e-08,2;CL:0002319,1.57e-07,43;CL:0000221,2.60e-07,44;CL:0000133,2.60e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.32e-22!75;UBERON:0001016!6.32e-22!75;UBERON:0004121!2.03e-21!102;UBERON:0000924!2.03e-21!102;UBERON:0006601!2.03e-21!102;UBERON:0001017!8.48e-20!73;UBERON:0005743!8.48e-20!73;UBERON:0001049!1.15e-17!52;UBERON:0005068!1.15e-17!52;UBERON:0006241!1.15e-17!52;UBERON:0007135!1.15e-17!52;UBERON:0000955!5.88e-17!50;UBERON:0006238!5.88e-17!50;UBERON:0000033!6.68e-17!63;UBERON:0002616!6.45e-16!49;UBERON:0002346!3.51e-13!71;UBERON:0003075!3.51e-13!71;UBERON:0007284!3.51e-13!71;UBERON:0002020!5.61e-13!34;UBERON:0002298!1.05e-11!6;UBERON:0003076!1.27e-11!12;UBERON:0003057!1.27e-11!12;UBERON:0007811!3.24e-11!86;UBERON:0002021!4.62e-10!10;UBERON:0000411!4.62e-10!10;UBERON:0001950!4.62e-10!10;UBERON:0000153!1.31e-09!94;UBERON:0002791!5.44e-09!29;UBERON:0003528!5.44e-09!29;UBERON:0001893!5.44e-09!29;UBERON:0003080!6.02e-09!40;UBERON:0003056!2.00e-08!49;UBERON:0002950!3.03e-08!4;UBERON:0001891!3.03e-08!4;UBERON:0009616!3.03e-08!4;UBERON:0002780!4.55e-08!39;UBERON:0001890!4.55e-08!39;UBERON:0006240!4.55e-08!39;UBERON:0002240!6.64e-08!6;UBERON:0005174!6.64e-08!6;UBERON:0001137!6.64e-08!6;UBERON:0002038!7.68e-07!3;UBERON:0002308!7.68e-07!3;UBERON:0009663!7.68e-07!3;UBERON:0009661!7.68e-07!3;UBERON:0006331!7.68e-07!3;UBERON:0000125!7.68e-07!3;UBERON:0004684!8.73e-07!3;UBERON:0002275!8.73e-07!3;UBERON:0002619!9.44e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.83e-23,75;UBERON:0000073,1.69e-22,54;UBERON:0001017,1.64e-21,73;UBERON:0001049,1.02e-18,52;UBERON:0005068,1.02e-18,52;UBERON:0006241,1.02e-18,52;UBERON:0007135,1.02e-18,52;UBERON:0004121,4.69e-17,95;UBERON:0000924,4.69e-17,95;UBERON:0006601,4.69e-17,95;UBERON:0002616,1.52e-14,46;UBERON:0002346,1.73e-14,64;UBERON:0003075,1.73e-14,64;UBERON:0007284,1.73e-14,64;UBERON:0000955,3.62e-14,47;UBERON:0006238,3.62e-14,47;UBERON:0002950,1.83e-13,4;UBERON:0001891,1.83e-13,4;UBERON:0009616,1.83e-13,4;UBERON:0010286,1.83e-13,4;UBERON:0010371,3.14e-12,73;UBERON:0002020,2.99e-11,34;UBERON:0002038,5.66e-11,3;UBERON:0009663,5.66e-11,3;UBERON:0009661,5.66e-11,3;UBERON:0000125,5.66e-11,3;UBERON:0002308,5.66e-11,3;UBERON:0004684,7.11e-11,3;UBERON:0002275,7.11e-11,3;UBERON:0003080,1.15e-10,40;UBERON:0003076,5.61e-10,12;UBERON:0003057,5.61e-10,12;UBERON:0002780,2.48e-09,39;UBERON:0001890,2.48e-09,39;UBERON:0006240,2.48e-09,39;UBERON:0003528,4.19e-09,29;UBERON:0002791,4.19e-09,29;UBERON:0001893,4.19e-09,29;UBERON:0010314,6.54e-09,92;UBERON:0003056,2.96e-08,49;UBERON:0002256,6.83e-08,2;UBERON:0001896,8.59e-08,2;UBERON:0002298,8.59e-08,2;UBERON:0005290,8.59e-08,2;UBERON:0010096,8.59e-08,2;UBERON:0002021,2.33e-07,10;UBERON:0000411,2.33e-07,10;UBERON:0001950,2.33e-07,10;UBERON:0002420,6.74e-07,8;UBERON:0007245,6.74e-07,8;UBERON:0010009,6.74e-07,8;UBERON:0010011,6.74e-07,8;UBERON:0000454,6.74e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09720077362883,5.76327457982332,0,0,0,4.28476476605705,4.8591079009355,0,0,0,5.50579404996943,3.31987079021488,3.5329502648936,0,0,0,6.42120897703176,3.37657566019008,3.51435969886663,0.883885756421003,0.711858403995515,0,1.36307147999731,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.585561594023094,34.7681533310335,0,0,0,0,1.04853447583376,1.83000241127451,0,0.347648640384553,1.27857728665165,1.87009240103604,1.62241263067758,0,0,0,0,0,0,0,0,0,0,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,1.9266070798535,7.03270119553219,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0.164140899745061,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,1.20297227640581,0.685082519770642,0.755393897389701,2.02506750069542,0,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.382576664137687,0.661774257358546,2.08681052058379 | |phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09720077362883,5.76327457982332,0,0,0,4.28476476605705,4.8591079009355,0,0,0,5.50579404996943,3.31987079021488,3.5329502648936,0,0,0,6.42120897703176,3.37657566019008,3.51435969886663,0.883885756421003,0.711858403995515,0,1.36307147999731,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.585561594023094,34.7681533310335,0,0,0,0,1.04853447583376,1.83000241127451,0,0.347648640384553,1.27857728665165,1.87009240103604,1.62241263067758,0,0,0,0,0,0,0,0,0,0,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,1.9266070798535,7.03270119553219,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0.164140899745061,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,1.20297227640581,0.685082519770642,0.755393897389701,2.02506750069542,0,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.382576664137687,0.661774257358546,2.08681052058379 | ||
|short_description=p@chr18:82753974..82753991,+ | |short_description=p@chr18:82753974..82753991,+ | ||
}} | }} |
Latest revision as of 04:51, 6 August 2015
Short description: | p@chr18:82753974..82753991, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:82753974..82753991, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 5.66e-11 | 3 |
raphe nuclei neuron | 7.11e-11 | 3 |
CNS neuron (sensu Vertebrata) | 2.17e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.17e-08 | 23 |
neuron of the dorsal spinal cord | 6.83e-08 | 2 |
central nervous system macrophage | 7.96e-08 | 2 |
microglial cell | 7.96e-08 | 2 |
neural cell | 1.57e-07 | 43 |
ectodermal cell | 2.60e-07 | 44 |
neurectodermal cell | 2.60e-07 | 44 |