FFCP PHASE1:Mm9::chr2:25947453..25947479,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67991 | |EntrezGene=67991 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=283 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-114bp_to_ENSMUST00000152133_5end | |association_with_transcript=-114bp_to_ENSMUST00000152133_5end | ||
|cluster_id=chr2:25947453..25947479,- | |||
|description=CAGE_peak_5_at_Nacc2_5end | |description=CAGE_peak_5_at_Nacc2_5end | ||
|id=chr2:25947453..25947479,- | |id=chr2:25947453..25947479,- | ||
|ontology_enrichment_celltype=CL:0000221!1.09e-17!44;CL:0000133!1.09e-17!44;CL:0002319!4.06e-17!43;CL:0000055!7.18e-17!50;CL:0000393!6.52e-13!39;CL:0000211!6.52e-13!39;CL:0000117!1.51e-12!23;CL:0000337!1.51e-12!23;CL:0000540!2.02e-12!33;CL:0000047!2.02e-12!33;CL:0000031!2.02e-12!33;CL:0000404!2.02e-12!33;CL:0002321!1.56e-08!70;CL:0000220!1.56e-08!70 | |ontology_enrichment_celltype=CL:0000221!1.09e-17!44;CL:0000133!1.09e-17!44;CL:0002319!4.06e-17!43;CL:0000055!7.18e-17!50;CL:0000393!6.52e-13!39;CL:0000211!6.52e-13!39;CL:0000117!1.51e-12!23;CL:0000337!1.51e-12!23;CL:0000540!2.02e-12!33;CL:0000047!2.02e-12!33;CL:0000031!2.02e-12!33;CL:0000404!2.02e-12!33;CL:0002321!1.56e-08!70;CL:0000220!1.56e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.98e-24,44;CL:0000133,3.98e-24,44;CL:0002319,5.32e-23,43;CL:0000117,1.01e-20,23;CL:0000337,1.01e-20,23;CL:0000540,5.71e-16,33;CL:0000047,5.71e-16,33;CL:0000031,5.71e-16,33;CL:0000404,5.71e-16,33;CL:0000393,1.16e-12,39;CL:0000211,1.16e-12,39;CL:0002321,2.91e-12,70;CL:0002453,2.34e-10,8;CL:0000333,5.11e-08,10;CL:0000095,5.11e-08,10;CL:0000243,5.11e-08,10;CL:0000123,5.11e-08,10;CL:0000125,5.11e-08,10;CL:0000030,5.11e-08,10;CL:0000339,5.11e-08,10;CL:0000128,3.72e-07,6;CL:0000126,3.72e-07,6;CL:0000127,3.72e-07,6;CL:0002610,9.88e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.28e-33!75;UBERON:0001016!3.28e-33!75;UBERON:0001017!3.06e-32!73;UBERON:0005743!3.06e-32!73;UBERON:0004121!9.48e-24!102;UBERON:0000924!9.48e-24!102;UBERON:0006601!9.48e-24!102;UBERON:0001049!1.44e-23!52;UBERON:0005068!1.44e-23!52;UBERON:0006241!1.44e-23!52;UBERON:0007135!1.44e-23!52;UBERON:0000955!1.04e-22!50;UBERON:0006238!1.04e-22!50;UBERON:0002616!5.40e-22!49;UBERON:0000033!7.12e-22!63;UBERON:0002020!2.69e-19!34;UBERON:0003080!1.05e-16!40;UBERON:0002791!2.91e-16!29;UBERON:0003528!2.91e-16!29;UBERON:0001893!2.91e-16!29;UBERON:0002780!6.03e-16!39;UBERON:0001890!6.03e-16!39;UBERON:0006240!6.03e-16!39;UBERON:0002346!1.89e-15!71;UBERON:0003075!1.89e-15!71;UBERON:0007284!1.89e-15!71;UBERON:0003056!2.68e-14!49;UBERON:0000956!4.02e-13!21;UBERON:0001869!4.02e-13!21;UBERON:0000203!4.02e-13!21;UBERON:0002619!3.78e-11!17;UBERON:0000153!1.20e-10!94;UBERON:0007811!1.11e-09!86;UBERON:0004111!5.17e-09!122;UBERON:0000025!8.00e-08!114;UBERON:0003076!1.51e-07!12;UBERON:0003057!1.51e-07!12;UBERON:0002021!2.28e-07!10;UBERON:0000411!2.28e-07!10;UBERON:0001950!2.28e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.43e-53,73;UBERON:0001016,5.08e-51,75;UBERON:0000073,6.17e-44,54;UBERON:0001049,1.76e-40,52;UBERON:0005068,1.76e-40,52;UBERON:0006241,1.76e-40,52;UBERON:0007135,1.76e-40,52;UBERON:0004121,1.81e-39,95;UBERON:0000924,1.81e-39,95;UBERON:0006601,1.81e-39,95;UBERON:0002020,2.22e-35,34;UBERON:0000955,1.54e-33,47;UBERON:0006238,1.54e-33,47;UBERON:0002616,4.30e-32,46;UBERON:0002346,6.40e-31,64;UBERON:0003075,6.40e-31,64;UBERON:0007284,6.40e-31,64;UBERON:0010371,4.88e-29,73;UBERON:0003528,9.53e-29,29;UBERON:0002791,9.53e-29,29;UBERON:0001893,9.53e-29,29;UBERON:0003080,2.53e-25,40;UBERON:0002780,8.46e-24,39;UBERON:0001890,8.46e-24,39;UBERON:0006240,8.46e-24,39;UBERON:0000956,8.37e-23,21;UBERON:0001869,8.37e-23,21;UBERON:0000203,8.37e-23,21;UBERON:0010314,8.06e-21,92;UBERON:0002619,1.75e-20,17;UBERON:0003056,3.03e-19,49;UBERON:0003076,8.42e-16,12;UBERON:0003057,8.42e-16,12;UBERON:0002021,1.78e-14,10;UBERON:0000411,1.78e-14,10;UBERON:0001950,1.78e-14,10;UBERON:0004111,5.74e-14,122;UBERON:0011216,9.01e-14,194;UBERON:0000025,1.00e-13,114;UBERON:0002240,1.90e-09,6;UBERON:0005174,1.90e-09,6;UBERON:0001137,1.90e-09,6;UBERON:0002950,4.01e-08,4;UBERON:0001891,4.01e-08,4;UBERON:0009616,4.01e-08,4;UBERON:0010286,4.01e-08,4;UBERON:0004733,6.57e-08,6;UBERON:0004732,6.57e-08,6;UBERON:0002028,6.57e-08,6;UBERON:0007277,6.57e-08,6;UBERON:0001948,1.09e-07,5;UBERON:0002315,1.09e-07,5;UBERON:0001954,1.46e-07,7;UBERON:0003022,1.46e-07,7;UBERON:0002421,1.46e-07,7;UBERON:0000349,1.46e-07,7;UBERON:0002600,1.46e-07,7;UBERON:0002420,4.10e-07,8;UBERON:0007245,4.10e-07,8;UBERON:0010009,4.10e-07,8;UBERON:0010011,4.10e-07,8;UBERON:0000454,4.10e-07,8;UBERON:0004684,9.88e-07,3;UBERON:0002275,9.88e-07,3 | |||
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| ||
|short_description=p5@Nacc2 | |short_description=p5@Nacc2 | ||
}} | }} |
Latest revision as of 10:46, 26 September 2015
Short description: | p5@Nacc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nacc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | -114bp_to_ENSMUST00000152133_5end |
EntrezGene: | Nacc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.98e-24 | 44 |
neurectodermal cell | 3.98e-24 | 44 |
neural cell | 5.32e-23 | 43 |
CNS neuron (sensu Vertebrata) | 1.01e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.01e-20 | 23 |
neuron | 5.71e-16 | 33 |
neuronal stem cell | 5.71e-16 | 33 |
neuroblast | 5.71e-16 | 33 |
electrically signaling cell | 5.71e-16 | 33 |
electrically responsive cell | 1.16e-12 | 39 |
electrically active cell | 1.16e-12 | 39 |
embryonic cell | 2.91e-12 | 70 |
oligodendrocyte precursor cell | 2.34e-10 | 8 |
migratory neural crest cell | 5.11e-08 | 10 |
neuron associated cell | 5.11e-08 | 10 |
glial cell (sensu Vertebrata) | 5.11e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 5.11e-08 | 10 |
glial cell | 5.11e-08 | 10 |
glioblast | 5.11e-08 | 10 |
glioblast (sensu Vertebrata) | 5.11e-08 | 10 |
oligodendrocyte | 3.72e-07 | 6 |
macroglial cell | 3.72e-07 | 6 |
astrocyte | 3.72e-07 | 6 |
raphe nuclei neuron | 9.88e-07 | 3 |