FFCP PHASE1:Mm9::chr15:74393929..74393977,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=107831|HGNC=|MCL_coexpression_id=189|UniProt=|association_with_transcript=-244bp_to_uc007wcr.1_5end|description=CAGE_peak_3_at_Bai1_5end|id=chr15:74393929..74393977,+|ontology_enrichment_celltype=CL:0000117!3.77e-13!23;CL:0000337!3.77e-13!23;CL:0000221!1.84e-09!44;CL:0000133!1.84e-09!44;CL:0002319!2.70e-09!43;CL:0000540!9.57e-08!33;CL:0000047!9.57e-08!33;CL:0000031!9.57e-08!33;CL:0000404!9.57e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,9.26e-21,23;CL:0000337,9.26e-21,23;CL:0002319,2.32e-15,43;CL:0000221,7.72e-15,44;CL:0000133,7.72e-15,44;CL:0000540,1.26e-12,33;CL:0000047,1.26e-12,33;CL:0000031,1.26e-12,33;CL:0000404,1.26e-12,33;CL:0000393,8.46e-10,39;CL:0000211,8.46e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!6.31e-35!63;UBERON:0002346!7.25e-34!71;UBERON:0003075!7.25e-34!71;UBERON:0007284!7.25e-34!71;UBERON:0001017!1.53e-31!73;UBERON:0005743!1.53e-31!73;UBERON:0001049!1.28e-30!52;UBERON:0005068!1.28e-30!52;UBERON:0006241!1.28e-30!52;UBERON:0007135!1.28e-30!52;UBERON:0004121!4.34e-30!102;UBERON:0000924!4.34e-30!102;UBERON:0006601!4.34e-30!102;UBERON:0000955!5.48e-30!50;UBERON:0006238!5.48e-30!50;UBERON:0000073!6.43e-30!75;UBERON:0001016!6.43e-30!75;UBERON:0002616!3.35e-29!49;UBERON:0003056!1.32e-28!49;UBERON:0007811!4.57e-27!86;UBERON:0003080!2.03e-23!40;UBERON:0002780!1.54e-22!39;UBERON:0001890!1.54e-22!39;UBERON:0006240!1.54e-22!39;UBERON:0000153!2.99e-22!94;UBERON:0002020!1.49e-20!34;UBERON:0002791!2.02e-17!29;UBERON:0003528!2.02e-17!29;UBERON:0001893!2.02e-17!29;UBERON:0000956!2.99e-12!21;UBERON:0001869!2.99e-12!21;UBERON:0000203!2.99e-12!21;UBERON:0002619!4.08e-10!17;UBERON:0002021!1.52e-08!10;UBERON:0000411!1.52e-08!10;UBERON:0001950!1.52e-08!10;UBERON:0003076!1.50e-07!12;UBERON:0003057!1.50e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.63e-49,64;UBERON:0003075,6.63e-49,64;UBERON:0007284,6.63e-49,64;UBERON:0000073,1.08e-47,54;UBERON:0001017,2.94e-45,73;UBERON:0001049,3.07e-44,52;UBERON:0005068,3.07e-44,52;UBERON:0006241,3.07e-44,52;UBERON:0007135,3.07e-44,52;UBERON:0004121,4.88e-44,95;UBERON:0000924,4.88e-44,95;UBERON:0006601,4.88e-44,95;UBERON:0001016,1.19e-43,75;UBERON:0010371,4.59e-41,73;UBERON:0003056,1.32e-38,49;UBERON:0000955,2.56e-38,47;UBERON:0006238,2.56e-38,47;UBERON:0002616,5.06e-37,46;UBERON:0002020,1.97e-35,34;UBERON:0003080,2.13e-31,40;UBERON:0002780,6.09e-30,39;UBERON:0001890,6.09e-30,39;UBERON:0006240,6.09e-30,39;UBERON:0003528,6.51e-30,29;UBERON:0002791,6.51e-30,29;UBERON:0001893,6.51e-30,29;UBERON:0010314,1.45e-29,92;UBERON:0000956,8.29e-21,21;UBERON:0001869,8.29e-21,21;UBERON:0000203,8.29e-21,21;UBERON:0002619,4.60e-17,17;UBERON:0000025,5.45e-14,114;UBERON:0004111,7.33e-14,122;UBERON:0002021,8.75e-14,10;UBERON:0000411,8.75e-14,10;UBERON:0001950,8.75e-14,10;UBERON:0003076,1.40e-12,12;UBERON:0003057,1.40e-12,12;UBERON:0000483,2.95e-10,174;UBERON:0002420,4.35e-10,8;UBERON:0007245,4.35e-10,8;UBERON:0010009,4.35e-10,8;UBERON:0010011,4.35e-10,8;UBERON:0000454,4.35e-10,8;UBERON:0000119,5.57e-10,176;UBERON:0011216,3.91e-09,194;UBERON:0002240,8.92e-08,6;UBERON:0005174,8.92e-08,6;UBERON:0001137,8.92e-08,6;UBERON:0000970,1.45e-07,9;UBERON:0000019,1.45e-07,9;UBERON:0000047,1.45e-07,9;UBERON:0010312,1.45e-07,9;UBERON:0004088,1.45e-07,9;UBERON:0002104,1.45e-07,9;UBERON:0001456,1.45e-07,9;UBERON:0003072,1.45e-07,9;UBERON:0004128,1.45e-07,9;UBERON:0003071,1.45e-07,9|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.75748946187577,1.36100929351998,0.419959264876088,4.31257693094915,0,0,0,0,0,0,2.63011399117477,0.528990979272033,3.80298842103708,0,0,0,0,0,2.99600110518405,4.99483796918021,2.17748185847803,1.89008313664367,1.47227472945967,4.28476476605705,2.42955395046775,2.20483438586917,1.15014565221884,0,23.1243350098716,54.2671186862048,39.3232725135983,3.03338461779446,2.37867873366265,2.08365348222704,5.30447698102624,3.93933827022176,5.95913166329559,3.53554302568401,3.98640706237488,1.86399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.587943535678524,0.125666591329675,0,0,0,0,0,0,1.86391761218122,8.19786231632332,12.9856958224342,0,0,0,0,10.9347166765521,6.8625090422794,2.51308704225729,5.9100268865374,7.92717917724025,40.9342447782333,30.825839982874,0.509196819251581,0.248813941220186,1.51633655060205,2.10441855886474,0.650602214813519,2.06911893990126,1.80062129805349,1.65775299619287,2.78949646520444,2.562274405697,1.87403449119458,6.46758426847539,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0.134206418760372,1.68231958851302,3.49875682089567,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,6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| ||
|EntrezGene=107831 | |||
|HGNC= | |||
|MCL_coexpression_id=189 | |||
|UniProt= | |||
|association_with_transcript=-244bp_to_uc007wcr.1_5end | |||
|description=CAGE_peak_3_at_Bai1_5end | |||
|id=chr15:74393929..74393977,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.77e-13!23;CL:0000337!3.77e-13!23;CL:0000221!1.84e-09!44;CL:0000133!1.84e-09!44;CL:0002319!2.70e-09!43;CL:0000540!9.57e-08!33;CL:0000047!9.57e-08!33;CL:0000031!9.57e-08!33;CL:0000404!9.57e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.26e-21,23;CL:0000337,9.26e-21,23;CL:0002319,2.32e-15,43;CL:0000221,7.72e-15,44;CL:0000133,7.72e-15,44;CL:0000540,1.26e-12,33;CL:0000047,1.26e-12,33;CL:0000031,1.26e-12,33;CL:0000404,1.26e-12,33;CL:0000393,8.46e-10,39;CL:0000211,8.46e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.31e-35!63;UBERON:0002346!7.25e-34!71;UBERON:0003075!7.25e-34!71;UBERON:0007284!7.25e-34!71;UBERON:0001017!1.53e-31!73;UBERON:0005743!1.53e-31!73;UBERON:0001049!1.28e-30!52;UBERON:0005068!1.28e-30!52;UBERON:0006241!1.28e-30!52;UBERON:0007135!1.28e-30!52;UBERON:0004121!4.34e-30!102;UBERON:0000924!4.34e-30!102;UBERON:0006601!4.34e-30!102;UBERON:0000955!5.48e-30!50;UBERON:0006238!5.48e-30!50;UBERON:0000073!6.43e-30!75;UBERON:0001016!6.43e-30!75;UBERON:0002616!3.35e-29!49;UBERON:0003056!1.32e-28!49;UBERON:0007811!4.57e-27!86;UBERON:0003080!2.03e-23!40;UBERON:0002780!1.54e-22!39;UBERON:0001890!1.54e-22!39;UBERON:0006240!1.54e-22!39;UBERON:0000153!2.99e-22!94;UBERON:0002020!1.49e-20!34;UBERON:0002791!2.02e-17!29;UBERON:0003528!2.02e-17!29;UBERON:0001893!2.02e-17!29;UBERON:0000956!2.99e-12!21;UBERON:0001869!2.99e-12!21;UBERON:0000203!2.99e-12!21;UBERON:0002619!4.08e-10!17;UBERON:0002021!1.52e-08!10;UBERON:0000411!1.52e-08!10;UBERON:0001950!1.52e-08!10;UBERON:0003076!1.50e-07!12;UBERON:0003057!1.50e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.63e-49,64;UBERON:0003075,6.63e-49,64;UBERON:0007284,6.63e-49,64;UBERON:0000073,1.08e-47,54;UBERON:0001017,2.94e-45,73;UBERON:0001049,3.07e-44,52;UBERON:0005068,3.07e-44,52;UBERON:0006241,3.07e-44,52;UBERON:0007135,3.07e-44,52;UBERON:0004121,4.88e-44,95;UBERON:0000924,4.88e-44,95;UBERON:0006601,4.88e-44,95;UBERON:0001016,1.19e-43,75;UBERON:0010371,4.59e-41,73;UBERON:0003056,1.32e-38,49;UBERON:0000955,2.56e-38,47;UBERON:0006238,2.56e-38,47;UBERON:0002616,5.06e-37,46;UBERON:0002020,1.97e-35,34;UBERON:0003080,2.13e-31,40;UBERON:0002780,6.09e-30,39;UBERON:0001890,6.09e-30,39;UBERON:0006240,6.09e-30,39;UBERON:0003528,6.51e-30,29;UBERON:0002791,6.51e-30,29;UBERON:0001893,6.51e-30,29;UBERON:0010314,1.45e-29,92;UBERON:0000956,8.29e-21,21;UBERON:0001869,8.29e-21,21;UBERON:0000203,8.29e-21,21;UBERON:0002619,4.60e-17,17;UBERON:0000025,5.45e-14,114;UBERON:0004111,7.33e-14,122;UBERON:0002021,8.75e-14,10;UBERON:0000411,8.75e-14,10;UBERON:0001950,8.75e-14,10;UBERON:0003076,1.40e-12,12;UBERON:0003057,1.40e-12,12;UBERON:0000483,2.95e-10,174;UBERON:0002420,4.35e-10,8;UBERON:0007245,4.35e-10,8;UBERON:0010009,4.35e-10,8;UBERON:0010011,4.35e-10,8;UBERON:0000454,4.35e-10,8;UBERON:0000119,5.57e-10,176;UBERON:0011216,3.91e-09,194;UBERON:0002240,8.92e-08,6;UBERON:0005174,8.92e-08,6;UBERON:0001137,8.92e-08,6;UBERON:0000970,1.45e-07,9;UBERON:0000019,1.45e-07,9;UBERON:0000047,1.45e-07,9;UBERON:0010312,1.45e-07,9;UBERON:0004088,1.45e-07,9;UBERON:0002104,1.45e-07,9;UBERON:0001456,1.45e-07,9;UBERON:0003072,1.45e-07,9;UBERON:0004128,1.45e-07,9;UBERON:0003071,1.45e-07,9 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.75748946187577,1.36100929351998,0.419959264876088,4.31257693094915,0,0,0,0,0,0,2.63011399117477,0.528990979272033,3.80298842103708,0,0,0,0,0,2.99600110518405,4.99483796918021,2.17748185847803,1.89008313664367,1.47227472945967,4.28476476605705,2.42955395046775,2.20483438586917,1.15014565221884,0,23.1243350098716,54.2671186862048,39.3232725135983,3.03338461779446,2.37867873366265,2.08365348222704,5.30447698102624,3.93933827022176,5.95913166329559,3.53554302568401,3.98640706237488,1.86399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.587943535678524,0.125666591329675,0,0,0,0,0,0,1.86391761218122,8.19786231632332,12.9856958224342,0,0,0,0,10.9347166765521,6.8625090422794,2.51308704225729,5.9100268865374,7.92717917724025,40.9342447782333,30.825839982874,0.509196819251581,0.248813941220186,1.51633655060205,2.10441855886474,0.650602214813519,2.06911893990126,1.80062129805349,1.65775299619287,2.78949646520444,2.562274405697,1.87403449119458,6.46758426847539,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0.134206418760372,1.68231958851302,3.49875682089567,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,6.56385444916338,0,0,0,0,0.215423397732799,0,0,0,0,0,0,4.81981974632711,0,0.890328018336276,0.977321756121456,0,0,0.242780636154981,0.604647113929502,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,1.70219802876894,0.720244376125241,0.905510786479282,0.857348140126369,0.886701168211368,1.42695054081656,0.658196082408484,3.95804433848979,0,0,2.8668691747145,0,0,0,0,0,0,6.11903496634682,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0,0.41326727862668,0,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0,0.387479470433193,0,0.469428954583016,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0.405450430580328,0.410843828659309,0.51968329191118,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0,0,0,0.428736758158132,1.00314420807073,3.95326289831947,6.44455331110048,5.72895513439397,5.15559547031063,6.16574267793578,3.0215755895588,4.72515750162264,7.20513925158753,4.98456649882625,8.28416498802912,0.31136204275253,0,0.341467211508268,0.972426868273176,0.419226325255965,0.735374033800057,0.222246727801615,0.412070114477788,0,1.51618327058278,0.25347929989024,0,0.655490552289177,0.512201219238954,0.459483751644906,1.90517476513229,0.811190281613988,0.578727661391115,0,0.735994600671987,0.685738504770831,0.354951612318675,0,0.290692833264657,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0.309873682371932,0.192906610981141,0.999242311751784,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p3@Bai1 | |||
}} |
Revision as of 10:50, 13 September 2013
Short description: | p3@Bai1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bai1_5end |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | -244bp_to_uc007wcr.1_5end |
EntrezGene: | Bai1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.26e-21 | 23 |
neuroblast (sensu Vertebrata) | 9.26e-21 | 23 |
neural cell | 2.32e-15 | 43 |
ectodermal cell | 7.72e-15 | 44 |
neurectodermal cell | 7.72e-15 | 44 |
neuron | 1.26e-12 | 33 |
neuronal stem cell | 1.26e-12 | 33 |
neuroblast | 1.26e-12 | 33 |
electrically signaling cell | 1.26e-12 | 33 |
electrically responsive cell | 8.46e-10 | 39 |
electrically active cell | 8.46e-10 | 39 |
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.