FFCP PHASE1:Hg19::chr1:154150651..154150691,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7170|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12012|TSSclassifier=S|UniProt=Q5VU63|association_with_transcript=0bp_to_ENST00000302206_5end|coexpression_cluster_id=C35|description=CAGE_peak_4_at_TPM3_5end|id=chr1:154150651..154150691,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;4.59e-10;2!CL:0000558;4.59e-10;2|ontology_enrichment_celltype_v019_2=CL:0000764,4.39e-10,2;CL:0000765,4.39e-10,2;CL:0000050,4.39e-10,2;CL:0000038,4.39e-10,2;CL:0000558,4.39e-10,2;CL:0000547,4.39e-10,2;CL:0000549,4.39e-10,2;CL:0000550,4.39e-10,2;CL:0000552,4.39e-10,2|ontology_enrichment_development_v019=UBERON:0006601;5.37e-11;82!UBERON:0010122;1.06e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!1.36e-49!34;UBERON:0002780!1.06e-48!41;UBERON:0001890!1.06e-48!41;UBERON:0006240!1.06e-48!41;UBERON:0002791!1.02e-47!33;UBERON:0003080!2.67e-47!42;UBERON:0001869!8.42e-47!32;UBERON:0001049!4.14e-43!57;UBERON:0005068!4.14e-43!57;UBERON:0006241!4.14e-43!57;UBERON:0007135!4.14e-43!57;UBERON:0002020!4.74e-43!34;UBERON:0003528!4.74e-43!34;UBERON:0002619!7.98e-39!22;UBERON:0007023!2.43e-38!115;UBERON:0001017!1.75e-36!82;UBERON:0005743!7.83e-36!86;UBERON:0000955!4.72e-35!69;UBERON:0006238!4.72e-35!69;UBERON:0001950!5.56e-35!20;UBERON:0002616!1.79e-34!59;UBERON:0000956!1.71e-33!25;UBERON:0000203!1.71e-33!25;UBERON:0003056!5.23e-33!61;UBERON:0000073!1.08e-32!94;UBERON:0001016!1.08e-32!94;UBERON:0002346!5.14e-32!90;UBERON:0003075!9.96e-31!86;UBERON:0007284!9.96e-31!86;UBERON:0002420!3.56e-18!9;UBERON:0007245!3.56e-18!9;UBERON:0010009!3.56e-18!9;UBERON:0010011!3.56e-18!9;UBERON:0000454!3.56e-18!9;UBERON:0000033!1.22e-16!123;UBERON:0000153!2.54e-15!129;UBERON:0007811!2.54e-15!129;UBERON:0009663!2.04e-14!7;UBERON:0000924!2.09e-13!173;UBERON:0006601!2.09e-13!173;UBERON:0000200!1.23e-12!6;UBERON:0004121!1.91e-12!169;UBERON:0001871!2.62e-12!7;UBERON:0000349!3.21e-11!5;UBERON:0002308!6.82e-11!9;UBERON:0000125!6.82e-11!9;UBERON:0001872!1.99e-10!5;UBERON:0002021!8.97e-10!5;UBERON:0000369!1.09e-09!4;UBERON:0002435!1.09e-09!4;UBERON:0000204!1.09e-09!4;UBERON:0010082!1.09e-09!4;UBERON:0000178!3.63e-09!15;UBERON:0000179!3.63e-09!15;UBERON:0000463!3.63e-09!15;UBERON:0005383!1.05e-07!3;UBERON:0005382!1.05e-07!3;UBERON:0000025!4.80e-07!194;UBERON:0002771!5.58e-07!3|ontology_enrichment_uberon_v019=UBERON:0001869;3.16e-66;32!UBERON:0002791;2.34e-61;32!UBERON:0001893;1.23e-60;34!UBERON:0002619;8.75e-59;22!UBERON:0003528;1.53e-56;34!UBERON:0002020;1.53e-56;34!UBERON:0000956;1.68e-51;25!UBERON:0000203;1.68e-51;25!UBERON:0001950;1.13e-50;20!UBERON:0002780;1.53e-48;41!UBERON:0001890;1.53e-48;41!UBERON:0000073;7.02e-27;53!UBERON:0002616;7.02e-27;53!UBERON:0000200;2.32e-26;6!UBERON:0000955;3.42e-26;68!UBERON:0002420;5.89e-25;9!UBERON:0007245;5.89e-25;9!UBERON:0010009;5.89e-25;9!UBERON:0010011;5.89e-25;9!UBERON:0000454;5.89e-25;9!UBERON:0001017;3.41e-24;75!UBERON:0000349;4.34e-23;5!UBERON:0000369;1.24e-19;4!UBERON:0002435;1.24e-19;4!UBERON:0000204;1.24e-19;4!UBERON:0009663;5.18e-17;7!UBERON:0001016;3.53e-16;83!UBERON:0007023;4.19e-16;114!UBERON:0001871;4.26e-16;6!UBERON:0005383;3.21e-15;3!UBERON:0005382;3.21e-15;3!UBERON:0001870;2.88e-14;3!UBERON:0001872;3.33e-14;5!UBERON:0000125;3.68e-13;9!UBERON:0002308;3.68e-13;9!UBERON:0000178;5.13e-13;15!UBERON:0000179;5.13e-13;15!UBERON:0000463;5.13e-13;15!UBERON:0001873;1.06e-10;2!UBERON:0001954;3.20e-10;2!UBERON:0003022;3.20e-10;2!UBERON:0002421;3.20e-10;2!UBERON:0002600;3.20e-10;2!UBERON:0001876;3.42e-10;2!UBERON:0002702;6.01e-10;2!UBERON:0002771;7.86e-10;2!UBERON:0002021;2.15e-08;5!UBERON:0011216;9.23e-08;132|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.63e-73,32;UBERON:0001893,5.59e-69,34;UBERON:0002791,2.60e-67,32;UBERON:0002780,7.73e-67,41;UBERON:0001890,7.73e-67,41;UBERON:0003080,7.73e-67,41;UBERON:0006240,7.73e-67,41;UBERON:0003528,3.83e-63,34;UBERON:0002020,3.83e-63,34;UBERON:0002619,8.62e-59,22;UBERON:0007023,1.74e-54,114;UBERON:0000956,1.66e-51,25;UBERON:0000203,1.66e-51,25;UBERON:0001049,2.11e-51,56;UBERON:0005068,2.11e-51,56;UBERON:0006241,2.11e-51,56;UBERON:0007135,2.11e-51,56;UBERON:0001950,1.12e-50,20;UBERON:0000073,1.37e-50,53;UBERON:0002616,1.37e-50,53;UBERON:0000955,1.70e-47,68;UBERON:0006238,1.70e-47,68;UBERON:0001017,4.72e-45,81;UBERON:0003056,2.99e-43,61;UBERON:0001016,6.09e-40,89;UBERON:0003075,2.85e-33,82;UBERON:0007284,2.85e-33,82;UBERON:0002346,1.91e-31,86;UBERON:0000200,3.45e-26,6;UBERON:0010371,5.99e-25,104;UBERON:0002420,6.79e-25,9;UBERON:0007245,6.79e-25,9;UBERON:0010009,6.79e-25,9;UBERON:0010011,6.79e-25,9;UBERON:0000454,6.79e-25,9;UBERON:0000349,4.98e-23,5;UBERON:0010314,5.07e-20,132;UBERON:0000369,1.27e-19,4;UBERON:0002435,1.27e-19,4;UBERON:0000204,1.27e-19,4;UBERON:0010082,1.27e-19,4;UBERON:0004121,9.71e-18,171;UBERON:0000924,9.71e-18,171;UBERON:0006601,9.71e-18,171;UBERON:0009663,5.44e-17,7;UBERON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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7170 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12012 | |||
|TSSclassifier=S | |||
|UniProt=Q5VU63 | |||
|association_with_transcript=0bp_to_ENST00000302206_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_4_at_TPM3_5end | |||
|id=chr1:154150651..154150691,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;4.59e-10;2!CL:0000558;4.59e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.39e-10,2;CL:0000765,4.39e-10,2;CL:0000050,4.39e-10,2;CL:0000038,4.39e-10,2;CL:0000558,4.39e-10,2;CL:0000547,4.39e-10,2;CL:0000549,4.39e-10,2;CL:0000550,4.39e-10,2;CL:0000552,4.39e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.37e-11;82!UBERON:0010122;1.06e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.36e-49!34;UBERON:0002780!1.06e-48!41;UBERON:0001890!1.06e-48!41;UBERON:0006240!1.06e-48!41;UBERON:0002791!1.02e-47!33;UBERON:0003080!2.67e-47!42;UBERON:0001869!8.42e-47!32;UBERON:0001049!4.14e-43!57;UBERON:0005068!4.14e-43!57;UBERON:0006241!4.14e-43!57;UBERON:0007135!4.14e-43!57;UBERON:0002020!4.74e-43!34;UBERON:0003528!4.74e-43!34;UBERON:0002619!7.98e-39!22;UBERON:0007023!2.43e-38!115;UBERON:0001017!1.75e-36!82;UBERON:0005743!7.83e-36!86;UBERON:0000955!4.72e-35!69;UBERON:0006238!4.72e-35!69;UBERON:0001950!5.56e-35!20;UBERON:0002616!1.79e-34!59;UBERON:0000956!1.71e-33!25;UBERON:0000203!1.71e-33!25;UBERON:0003056!5.23e-33!61;UBERON:0000073!1.08e-32!94;UBERON:0001016!1.08e-32!94;UBERON:0002346!5.14e-32!90;UBERON:0003075!9.96e-31!86;UBERON:0007284!9.96e-31!86;UBERON:0002420!3.56e-18!9;UBERON:0007245!3.56e-18!9;UBERON:0010009!3.56e-18!9;UBERON:0010011!3.56e-18!9;UBERON:0000454!3.56e-18!9;UBERON:0000033!1.22e-16!123;UBERON:0000153!2.54e-15!129;UBERON:0007811!2.54e-15!129;UBERON:0009663!2.04e-14!7;UBERON:0000924!2.09e-13!173;UBERON:0006601!2.09e-13!173;UBERON:0000200!1.23e-12!6;UBERON:0004121!1.91e-12!169;UBERON:0001871!2.62e-12!7;UBERON:0000349!3.21e-11!5;UBERON:0002308!6.82e-11!9;UBERON:0000125!6.82e-11!9;UBERON:0001872!1.99e-10!5;UBERON:0002021!8.97e-10!5;UBERON:0000369!1.09e-09!4;UBERON:0002435!1.09e-09!4;UBERON:0000204!1.09e-09!4;UBERON:0010082!1.09e-09!4;UBERON:0000178!3.63e-09!15;UBERON:0000179!3.63e-09!15;UBERON:0000463!3.63e-09!15;UBERON:0005383!1.05e-07!3;UBERON:0005382!1.05e-07!3;UBERON:0000025!4.80e-07!194;UBERON:0002771!5.58e-07!3 | |||
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|short_description=p4@TPM3 | |||
}} |
Revision as of 00:36, 12 September 2013
Short description: | p4@TPM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TPM3_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000302206_5end |
EntrezGene: | TPM3 |
HGNC: | 12012 |
UniProt: | Q5VU63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.39e-10 | 2 |
erythroblast | 4.39e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 4.39e-10 | 2 |
erythroid progenitor cell | 4.39e-10 | 2 |
reticulocyte | 4.39e-10 | 2 |
proerythroblast | 4.39e-10 | 2 |
basophilic erythroblast | 4.39e-10 | 2 |
polychromatophilic erythroblast | 4.39e-10 | 2 |
orthochromatic erythroblast | 4.39e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.