FFCP PHASE1:Hg19::chr1:201709054..201709065,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=89796 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15989 | |||
|TSSclassifier=S | |||
|UniProt=F8W780,Q8NEY1 | |||
|association_with_transcript=58bp_to_ENST00000367295,ENST00000367301,uc001gww.1,uc001gwx.2_5end | |||
|coexpression_cluster_id=C2550 | |||
|description=CAGE_peak_5_at_NAV1_5end | |||
|id=chr1:201709054..201709065,+ | |||
|ontology_enrichment_celltype=CL:0000359!1.36e-12!32;CL:0000183!6.80e-11!59;CL:0000222!1.65e-10!119;CL:0000192!1.78e-10!42;CL:0000514!1.78e-10!42;CL:0000680!3.96e-10!57;CL:0000056!3.96e-10!57;CL:0000355!3.96e-10!57;CL:0002321!4.13e-10!248;CL:0000220!5.11e-10!246;CL:0000187!1.00e-09!54;CL:0000055!2.15e-09!180;CL:0000393!4.19e-08!60;CL:0000211!4.19e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.77e-13;32!CL:0000192;7.67e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.60e-13,32;CL:0000192,2.30e-10,43;CL:0000514,2.30e-10,43;CL:0002321,4.84e-08,250;CL:0000222,1.06e-07,121;CL:0000680,1.39e-07,58;CL:0000056,1.39e-07,58;CL:0000355,1.39e-07,58;CL:0000187,1.89e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;7.67e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.51e-24!312;UBERON:0000483!5.61e-23!309;UBERON:0000025!4.54e-19!194;UBERON:0002049!2.48e-18!79;UBERON:0007798!2.48e-18!79;UBERON:0000475!2.63e-18!365;UBERON:0004111!1.74e-17!241;UBERON:0000477!1.31e-16!286;UBERON:0004872!1.03e-15!84;UBERON:0001009!5.91e-15!113;UBERON:0001637!1.14e-14!42;UBERON:0003509!1.14e-14!42;UBERON:0004572!1.14e-14!42;UBERON:0001981!1.23e-14!60;UBERON:0007500!1.23e-14!60;UBERON:0004537!1.23e-14!60;UBERON:0006965!1.23e-14!60;UBERON:0004535!7.66e-14!110;UBERON:0000055!4.72e-13!69;UBERON:0003075!5.44e-13!86;UBERON:0007284!5.44e-13!86;UBERON:0002346!1.11e-11!90;UBERON:0003914!2.04e-11!118;UBERON:0004573!2.16e-11!33;UBERON:0004571!2.16e-11!33;UBERON:0002616!3.51e-11!59;UBERON:0000033!8.51e-11!123;UBERON:0004121!1.03e-10!169;UBERON:0000486!1.42e-10!82;UBERON:0000468!1.85e-10!659;UBERON:0000481!1.90e-10!347;UBERON:0000153!5.00e-10!129;UBERON:0007811!5.00e-10!129;UBERON:0000924!5.90e-10!173;UBERON:0006601!5.90e-10!173;UBERON:0001049!1.43e-09!57;UBERON:0005068!1.43e-09!57;UBERON:0006241!1.43e-09!57;UBERON:0007135!1.43e-09!57;UBERON:0003056!2.77e-09!61;UBERON:0001134!3.66e-09!61;UBERON:0002036!3.66e-09!61;UBERON:0003082!3.66e-09!61;UBERON:0007100!4.22e-09!27;UBERON:0002385!4.76e-09!63;UBERON:0001015!4.76e-09!63;UBERON:0000383!4.76e-09!63;UBERON:0000955!6.58e-09!69;UBERON:0006238!6.58e-09!69;UBERON:0005743!1.27e-08!86;UBERON:0001017!6.72e-08!82;UBERON:0000948!8.09e-08!24;UBERON:0005498!8.09e-08!24;UBERON:0004140!8.09e-08!24;UBERON:0009881!8.09e-08!24;UBERON:0004141!8.09e-08!24;UBERON:0003084!8.09e-08!24;UBERON:0007005!8.09e-08!24;UBERON:0004139!8.09e-08!24;UBERON:0004291!8.09e-08!24;UBERON:0004290!1.56e-07!70;UBERON:0000073!2.15e-07!94;UBERON:0001016!2.15e-07!94;UBERON:0002200!3.56e-07!11;UBERON:0006876!3.56e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.59e-12;42!UBERON:0003509;3.59e-12;42!UBERON:0004572;3.59e-12;42!UBERON:0004573;4.61e-11;33!UBERON:0004571;4.61e-11;33!UBERON:0007100;3.25e-08;25!UBERON:0006876;3.33e-08;11!UBERON:0002049;1.64e-07;75!UBERON:0007798;1.64e-07;75!UBERON:0007500;1.68e-07;56!UBERON:0001981;1.68e-07;56!UBERON:0004537;1.68e-07;56!UBERON:0000948;8.97e-07;22 | |||
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| |||
|short_description=p5@NAV1 | |||
}} |
Revision as of 02:47, 12 September 2013
Short description: | p5@NAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_NAV1_5end |
Coexpression cluster: | C2550_Fibroblast_heart_Sebocyte_Mesenchymal_osteoclastoma_Mesothelial_Pericytes |
Association with transcript: | 58bp_to_ENST00000367295, ENST00000367301, uc001gww.1, uc001gwx.2_5end |
EntrezGene: | NAV1 |
HGNC: | 15989 |
UniProt: | F8W780Q8NEY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.60e-13 | 32 |
smooth muscle cell | 2.30e-10 | 43 |
smooth muscle myoblast | 2.30e-10 | 43 |
embryonic cell | 4.84e-08 | 250 |
mesodermal cell | 1.06e-07 | 121 |
muscle precursor cell | 1.39e-07 | 58 |
myoblast | 1.39e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-07 | 58 |
muscle cell | 1.89e-07 | 55 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.