FFCP PHASE1:Hg19::chr1:233765566..233765580,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3775|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6272|TSSclassifier=W|UniProt=Q5T5E7|association_with_transcript=213bp_to_ENST00000366620,uc001hvw.2,uc001hvx.2_5end|coexpression_cluster_id=C3|description=CAGE_peak_20_at_KCNK1_5end|id=chr1:233765566..233765580,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;2.18e-34;3!UBERON:0006601;5.22e-11;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002619!2.83e-94!22;UBERON:0000956!5.18e-83!25;UBERON:0000203!5.18e-83!25;UBERON:0001950!6.06e-82!20;UBERON:0001869!2.98e-80!32;UBERON:0001893!1.86e-75!34;UBERON:0002791!6.57e-70!33;UBERON:0002780!1.12e-68!41;UBERON:0001890!1.12e-68!41;UBERON:0006240!1.12e-68!41;UBERON:0002020!8.23e-68!34;UBERON:0003528!8.23e-68!34;UBERON:0003080!5.44e-67!42;UBERON:0001049!9.01e-65!57;UBERON:0005068!9.01e-65!57;UBERON:0006241!9.01e-65!57;UBERON:0007135!9.01e-65!57;UBERON:0002616!1.79e-62!59;UBERON:0000955!8.14e-57!69;UBERON:0006238!8.14e-57!69;UBERON:0001017!1.09e-55!82;UBERON:0005743!5.87e-53!86;UBERON:0003075!1.78e-49!86;UBERON:0007284!1.78e-49!86;UBERON:0000073!1.23e-47!94;UBERON:0001016!1.23e-47!94;UBERON:0002346!4.15e-47!90;UBERON:0003056!2.82e-45!61;UBERON:0007023!1.06e-42!115;UBERON:0000200!3.53e-42!6;UBERON:0000033!4.18e-33!123;UBERON:0000153!2.20e-31!129;UBERON:0007811!2.20e-31!129;UBERON:0004121!6.75e-25!169;UBERON:0000924!3.16e-24!173;UBERON:0006601!3.16e-24!173;UBERON:0002021!2.00e-22!5;UBERON:0001872!2.50e-22!5;UBERON:0000349!4.85e-22!5;UBERON:0001871!5.41e-22!7;UBERON:0002771!7.67e-22!3;UBERON:0000025!3.23e-16!194;UBERON:0001870!1.33e-15!2;UBERON:0002360!1.80e-14!2;UBERON:0000094!1.80e-14!2;UBERON:0007645!1.80e-14!2;UBERON:0001954!2.07e-14!2;UBERON:0003022!2.07e-14!2;UBERON:0002421!2.07e-14!2;UBERON:0002600!2.07e-14!2;UBERON:0000064!1.62e-12!219;UBERON:0004111!3.39e-12!241;UBERON:0002037!2.00e-11!6;UBERON:0006215!2.00e-11!6;UBERON:0000477!1.18e-10!286;UBERON:0000483!1.39e-10!309;UBERON:0000119!1.95e-10!312;UBERON:0002702!1.05e-08!1;UBERON:0007190!1.75e-08!1;UBERON:0002581!2.02e-08!1;UBERON:0002022!2.50e-08!1;UBERON:0000475!3.38e-08!365;UBERON:0001882!4.72e-08!1;UBERON:0005403!4.72e-08!1;UBERON:0003112!5.07e-08!1;UBERON:0000032!5.07e-08!1;UBERON:0005253!5.07e-08!1;UBERON:0003128!5.07e-08!1;UBERON:0002241!5.07e-08!1;UBERON:0001703!5.07e-08!1;UBERON:0004761!5.07e-08!1;UBERON:0009617!5.07e-08!1;UBERON:0002902!5.43e-08!1;UBERON:0009899!5.43e-08!1;UBERON:0002363!7.16e-08!1;UBERON:0007647!7.16e-08!1;UBERON:0010115!7.16e-08!1;UBERON:0002680!9.09e-08!9;UBERON:0001895!9.09e-08!9;UBERON:0010092!9.09e-08!9;UBERON:0000481!4.96e-07!347|ontology_enrichment_uberon_v019=UBERON:0001950;1.14e-73;20!UBERON:0002619;3.81e-67;22!UBERON:0000956;3.09e-59;25!UBERON:0000203;3.09e-59;25!UBERON:0001869;6.43e-49;32!UBERON:0000200;4.00e-46;6!UBERON:0001893;1.01e-44;34!UBERON:0002791;2.32e-42;32!UBERON:0003528;4.85e-37;34!UBERON:0002020;4.85e-37;34!UBERON:0001870;2.89e-34;3!UBERON:0002780;4.00e-33;41!UBERON:0001890;4.00e-33;41!UBERON:0000073;2.24e-27;53!UBERON:0002616;2.24e-27;53!UBERON:0002702;2.22e-23;2!UBERON:0001872;2.43e-20;5!UBERON:0000955;3.17e-18;68!UBERON:0001017;3.23e-18;75!UBERON:0002037;1.52e-17;6!UBERON:0001016;5.68e-17;83!UBERON:0001871;7.19e-15;6!UBERON:0002581;2.46e-12;1!UBERON:0002022;2.46e-12;1!UBERON:0007190;2.46e-12;1!UBERON:0002680;6.77e-12;9!UBERON:0001895;6.77e-12;9!UBERON:0007023;6.35e-10;114!UBERON:0002021;9.69e-10;5!UBERON:0004733;4.69e-09;12!UBERON:0002028;4.69e-09;12!UBERON:0004732;2.14e-08;13!UBERON:0011216;2.48e-07;132!UBERON:0002771;5.57e-07;2!UBERON:0001876;8.52e-07;2!UBERON:0002360;8.52e-07;2!UBERON:0000094;8.52e-07;2!UBERON:0010743;8.52e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.32e-74,20;UBERON:0002619,2.55e-67,22;UBERON:0000956,2.16e-59,25;UBERON:0000203,2.16e-59,25;UBERON:0001869,1.12e-54,32;UBERON:0001893,1.83e-51,34;UBERON:0000073,2.16e-50,53;UBERON:0002616,2.16e-50,53;UBERON:0001049,1.22e-47,56;UBERON:0005068,1.22e-47,56;UBERON:0006241,1.22e-47,56;UBERON:0007135,1.22e-47,56;UBERON:0000200,1.51e-46,6;UBERON:0002791,1.73e-46,32;UBERON:0003528,9.50e-44,34;UBERON:0002020,9.50e-44,34;UBERON:0000955,1.72e-43,68;UBERON:0006238,1.72e-43,68;UBERON:0002780,1.28e-42,41;UBERON:0001890,1.28e-42,41;UBERON:0003080,1.28e-42,41;UBERON:0006240,1.28e-42,41;UBERON:0001017,6.12e-41,81;UBERON:0001016,9.67e-37,89;UBERON:0001870,1.56e-34,3;UBERON:0003075,4.10e-32,82;UBERON:0007284,4.10e-32,82;UBERON:0002346,1.51e-30,86;UBERON:0003056,2.46e-28,61;UBERON:0007023,7.29e-26,114;UBERON:0010371,5.76e-25,104;UBERON:0002702,1.13e-23,2;UBERON:0001872,4.13e-20,5;UBERON:0010314,2.83e-19,132;UBERON:0004121,1.93e-18,171;UBERON:0000924,1.93e-18,171;UBERON:0006601,1.93e-18,171;UBERON:0002037,1.61e-17,6;UBERON:0006215,1.61e-17,6;UBERON:0001871,5.82e-15,6;UBERON:0011216,1.29e-13,223;UBERON:0000025,1.30e-12,192;UBERON:0007190,1.75e-12,1;UBERON:0002581,2.20e-12,1;UBERON:0002022,3.08e-12,1;UBERON:0002680,7.03e-12,9;UBERON:0001895,7.03e-12,9;UBERON:0010092,7.03e-12,9;UBERON:0002021,7.11e-10,5;UBERON:0004111,1.19e-09,240;UBERON:0004733,4.83e-09,12;UBERON:0002028,4.83e-09,12;UBERON:0007277,4.83e-09,12;UBERON:0004732,2.19e-08,13;UBERON:0003076,2.48e-07,15;UBERON:0003057,2.48e-07,15;UBERON:0000483,4.51e-07,306;UBERON:0002771,5.41e-07,2;UBERON:0000119,5.56e-07,309;UBERON:0001876,6.80e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54736358051564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02044907978036,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,1.21637185924347,3.54657142744257,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02594547058812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,1.21499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,0.732157589411779,1.8778639605975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,1.41696576325585,0.957803154342908,1.64093091392604,0,0.484100767249525,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48582686160468,0.781078098613847,1.03343398250592,1.07806877329642,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,1.29183831362738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p20@KCNK1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3775 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6272 | |||
|TSSclassifier=W | |||
|UniProt=Q5T5E7 | |||
|association_with_transcript=213bp_to_ENST00000366620,uc001hvw.2,uc001hvx.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_20_at_KCNK1_5end | |||
|id=chr1:233765566..233765580,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.18e-34;3!UBERON:0006601;5.22e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p20@KCNK1 | |||
}} |
Revision as of 04:15, 12 September 2013
Short description: | p20@KCNK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_KCNK1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 213bp_to_ENST00000366620, uc001hvw.2, uc001hvx.2_5end |
EntrezGene: | KCNK1 |
HGNC: | 6272 |
UniProt: | Q5T5E7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.