FFCP PHASE1:Hg19::chr10:85954377..85954438,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=92211 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14550 | |||
|TSSclassifier=S | |||
|UniProt=F1T0L2,Q96JP9,B3KWC7 | |||
|association_with_transcript=0bp_to_ENST00000332904,ENST00000372117,NM_001171971,NM_033100_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_CDHR1_5end | |||
|id=chr10:85954377..85954438,+ | |||
|ontology_enrichment_celltype=CL:1000507!3.46e-08!12;CL:1000494!3.46e-08!12;CL:1000449!1.16e-07!16;CL:1000497!3.03e-07!18;CL:0002518!3.03e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.44e-14;10!CL:1000494;1.44e-14;10!CL:1000449;9.52e-13;15!CL:1000497;7.52e-11;17!CL:0002518;7.52e-11;17!CL:0002681;3.81e-09;12!CL:0002584;3.81e-09;12!CL:0002368;5.96e-08;13!CL:0000244;2.22e-07;4!CL:0000731;2.22e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.25e-14,10;CL:1000494,1.25e-14,10;CL:1000449,1.08e-12,15;CL:1000497,8.36e-11,17;CL:0002518,8.36e-11,17;CL:0002681,4.98e-09,12;CL:0002584,4.98e-09,12;CL:0002368,6.28e-08,13;CL:0000244,1.90e-07,4;CL:0000731,1.90e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.14e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.18e-29!86;UBERON:0001017!8.65e-28!82;UBERON:0000073!8.69e-26!94;UBERON:0001016!8.69e-26!94;UBERON:0001049!2.63e-24!57;UBERON:0005068!2.63e-24!57;UBERON:0006241!2.63e-24!57;UBERON:0007135!2.63e-24!57;UBERON:0004121!9.36e-24!169;UBERON:0000153!1.59e-23!129;UBERON:0007811!1.59e-23!129;UBERON:0000033!3.31e-23!123;UBERON:0003075!9.69e-23!86;UBERON:0007284!9.69e-23!86;UBERON:0000955!1.12e-22!69;UBERON:0006238!1.12e-22!69;UBERON:0000924!2.24e-22!173;UBERON:0006601!2.24e-22!173;UBERON:0002616!2.93e-22!59;UBERON:0002780!1.48e-21!41;UBERON:0001890!1.48e-21!41;UBERON:0006240!1.48e-21!41;UBERON:0003080!1.12e-20!42;UBERON:0002346!1.17e-20!90;UBERON:0007023!3.02e-20!115;UBERON:0003056!5.27e-20!61;UBERON:0002020!6.86e-19!34;UBERON:0003528!6.86e-19!34;UBERON:0001893!1.27e-18!34;UBERON:0002791!5.85e-18!33;UBERON:0001869!1.42e-17!32;UBERON:0000064!4.92e-16!219;UBERON:0000475!6.51e-13!365;UBERON:0000956!7.60e-13!25;UBERON:0000203!7.60e-13!25;UBERON:0002619!1.22e-11!22;UBERON:0001950!1.43e-10!20;UBERON:0000922!8.58e-10!612;UBERON:0000481!1.20e-09!347;UBERON:0000119!3.50e-09!312;UBERON:0000483!1.24e-08!309;UBERON:0003887!1.82e-08!21;UBERON:0000923!2.65e-08!604;UBERON:0005291!2.65e-08!604;UBERON:0006598!2.65e-08!604;UBERON:0002532!2.65e-08!604;UBERON:0002050!3.41e-08!605;UBERON:0005423!3.41e-08!605;UBERON:0009773!3.46e-08!12;UBERON:0001231!3.46e-08!12;UBERON:0004810!3.46e-08!12;UBERON:0006555!8.61e-08!17;UBERON:0005103!8.61e-08!17;UBERON:0000083!8.61e-08!17;UBERON:0009201!8.61e-08!17;UBERON:0004819!8.61e-08!17;UBERON:0006553!8.61e-08!17;UBERON:0003074!8.61e-08!17;UBERON:0003060!8.61e-08!17;UBERON:0002308!1.05e-07!9;UBERON:0000125!1.05e-07!9;UBERON:0004211!1.16e-07!16;UBERON:0001285!1.16e-07!16;UBERON:0007684!1.16e-07!16;UBERON:0003220!1.16e-07!16;UBERON:0004208!1.16e-07!16;UBERON:0000062!1.35e-07!511;UBERON:0000480!2.29e-07!626;UBERON:0000467!3.30e-07!625;UBERON:0000080!4.38e-07!18;UBERON:0002120!4.38e-07!18;UBERON:0004875!4.38e-07!18;UBERON:0005721!4.38e-07!18;UBERON:0005754!4.38e-07!18;UBERON:0007297!4.38e-07!18;UBERON:0002420!5.61e-07!9;UBERON:0007245!5.61e-07!9;UBERON:0010009!5.61e-07!9;UBERON:0010011!5.61e-07!9;UBERON:0000454!5.61e-07!9;UBERON:0004876!9.03e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;6.72e-18;34!UBERON:0002020;6.72e-18;34!UBERON:0001893;1.85e-17;34!UBERON:0002780;5.03e-17;41!UBERON:0001890;5.03e-17;41!UBERON:0001869;8.50e-17;32!UBERON:0002791;9.57e-17;32!UBERON:0000073;1.80e-16;53!UBERON:0002616;1.80e-16;53!UBERON:0004211;1.44e-14;10!UBERON:0009773;1.44e-14;10!UBERON:0001231;1.44e-14;10!UBERON:0004810;1.44e-14;10!UBERON:0000955;2.22e-14;68!UBERON:0006555;9.52e-13;15!UBERON:0004819;9.52e-13;15!UBERON:0001285;9.52e-13;15!UBERON:0007684;9.52e-13;15!UBERON:0002619;1.48e-12;22!UBERON:0001017;2.55e-12;75!UBERON:0000956;5.97e-12;25!UBERON:0000203;5.97e-12;25!UBERON:0000125;8.12e-12;9!UBERON:0002308;8.12e-12;9!UBERON:0001950;5.59e-11;20!UBERON:0006554;6.47e-11;30!UBERON:0001008;6.47e-11;30!UBERON:0001016;1.34e-10;83!UBERON:0009663;2.82e-09;7!UBERON:0001225;3.81e-09;12!UBERON:0008987;3.81e-09;12!UBERON:0002298;1.90e-08;6!UBERON:0000353;2.61e-08;15!UBERON:0000489;3.97e-08;29!UBERON:0002113;7.24e-08;24!UBERON:0011143;7.24e-08;24!UBERON:0000200;8.94e-08;6!UBERON:0002420;6.23e-07;9!UBERON:0007245;6.23e-07;9!UBERON:0010009;6.23e-07;9!UBERON:0010011;6.23e-07;9!UBERON:0000454;6.23e-07;9!UBERON:0001851;6.83e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.02e-31,56;UBERON:0005068,5.02e-31,56;UBERON:0006241,5.02e-31,56;UBERON:0007135,5.02e-31,56;UBERON:0001017,9.87e-30,81;UBERON:0000073,1.05e-29,53;UBERON:0002616,1.05e-29,53;UBERON:0010371,6.60e-29,104;UBERON:0000955,6.16e-28,68;UBERON:0006238,6.16e-28,68;UBERON:0001016,1.10e-26,89;UBERON:0003075,2.70e-25,82;UBERON:0007284,2.70e-25,82;UBERON:0002780,1.53e-24,41;UBERON:0001890,1.53e-24,41;UBERON:0003080,1.53e-24,41;UBERON:0006240,1.53e-24,41;UBERON:0002346,1.87e-23,86;UBERON:0004121,2.31e-23,171;UBERON:0000924,2.31e-23,171;UBERON:0006601,2.31e-23,171;UBERON:0003056,8.48e-22,61;UBERON:0003528,3.43e-21,34;UBERON:0002020,3.43e-21,34;UBERON:0001893,8.04e-21,34;UBERON:0001869,3.82e-19,32;UBERON:0002791,7.32e-19,32;UBERON:0010314,6.12e-18,132;UBERON:0011216,1.60e-17,223;UBERON:0004810,1.25e-14,10;UBERON:0007023,7.26e-14,114;UBERON:0002619,1.05e-12,22;UBERON:0004211,1.08e-12,15;UBERON:0009773,1.08e-12,15;UBERON:0001231,1.08e-12,15;UBERON:0001285,1.08e-12,15;UBERON:0007684,1.08e-12,15;UBERON:0004208,1.08e-12,15;UBERON:0000483,3.46e-12,306;UBERON:0000956,4.96e-12,25;UBERON:0000203,4.96e-12,25;UBERON:0000125,7.13e-12,9;UBERON:0002308,7.13e-12,9;UBERON:0000119,7.38e-12,309;UBERON:0006555,1.09e-11,16;UBERON:0004819,1.09e-11,16;UBERON:0000025,1.57e-11,192;UBERON:0001950,4.88e-11,20;UBERON:0004111,1.14e-10,240;UBERON:0000922,7.32e-10,592;UBERON:0005423,1.31e-09,581;UBERON:0009663,2.80e-09,7;UBERON:0001225,4.98e-09,12;UBERON:0008987,4.98e-09,12;UBERON:0002298,1.21e-08,6;UBERON:0000353,3.30e-08,15;UBERON:0000200,7.57e-08,6;UBERON:0003076,1.09e-07,15;UBERON:0003057,1.09e-07,15;UBERON:0000489,2.45e-07,31;UBERON:0002113,5.87e-07,26;UBERON:0003918,5.87e-07,26;UBERON:0011143,5.87e-07,26;UBERON:0005095,5.87e-07,26;UBERON:0007687,5.87e-07,26;UBERON:0002420,6.19e-07,9;UBERON:0007245,6.19e-07,9;UBERON:0010009,6.19e-07,9;UBERON:0010011,6.19e-07,9;UBERON:0000454,6.19e-07,9;UBERON:0001851,8.36e-07,15 | |||
|phase1_expression=0,2.78330681058278,0.704772020479856,2.00146596706261,2.23480547213644,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,1.09499540058307,0.87879847716362,0.0764134057479513,0,0.157421562627358,0,0.383829398097213,0,4.59710612239464,6.92773613189975,3.32778609150109,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.604820229674197,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.392937226493138,5.46442932438813,2.59549109949101,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.210633459991,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,4.22764195117554,2.91371299862637,2.24721290723598,0,0.61417158655884,0,0,0,2.73048408581408,0,0,1.00094815897571,0.277064115484183,0.438977620880838,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,4.63668405004419,1.14721838155602,0.853815942907168,0.795178609928912,0.929551542956147,0.932949495138334,1.26160425437814,1.45990943630332,0,0.643240938192885,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,1.40241773803446,3.2925920906512,1.47008711385542,0,0,0.590789906681404,0,0,0,6.58501712451753,2.24803506515239,0.904760751704678,2.77765335475589,0.325808305310325,0,0,2.78232971940184,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,5.87937448696008,4.39502801451398,2.68675568108545,4.35950907770943,5.75074018747817,0,0,0,0,0,0.063497894292169,0.381988425558278,1.17217447210047,0,0,0,0,0.336393253036082,0.43596006883328,0.4400297149257,0,7.15312891703765,0,0,0,0,0,0,1.28680194292333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,1.37921532141349,0.646882724578552,0.385029108839245,0.508189248444927,1.30139853857622,0.773288812777695,0.335032530668698,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37257369524342,0,0,0.320182673410333,0,0,0,0.248107807818777,0,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,7.21919380651859,2.46449078734127,5.49044838423799,2.92278449306521,6.54420099135829,0,0.170093705276516,2.15915916102139,3.08454505380579,6.50271450105247,26.0878682404524,4.33289664176565,2.49322802678617,3.35812132083267,0.219259876645935,0,2.56450125116389,0.656029291399411,0,0,0,0,5.74265537996172,0,0,0,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0,2.14870389969272,0.768760269460425,3.95599408733211,1.4162089319777,0,0,0,0,0,0,0,0,0,0.632758849437452,0.571890581771475,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,4.13755084719702,3.35151137767894,3.26672954583968,0.0941438007767792,3.87454835404107,8.42357378338128,15.9634855273203,11.256446610141,0,0,0.569647187174163,0.952927101831156,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,35.7710839659874,0,0.614481528616916,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,0.398495976502139,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,2.90799823828566,3.24688343566479,3.99227596002388,0,0,0,0.1137934482855,0,0,1.72371686620732,0,0,4.42870692906919,1.80894657938112,1.52581736317083,0.331737779793674,2.36438095162838,5.70402032600329,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0.19606253431774,0.671286347903371,0.189753732724185,0,0,0,0,0.216388639742091,16.9194528283346,1.50377859655677,10.3875124638716,3.26173241548684,3.70691816839509,3.34150238417457,2.15683625538167,0,1.1713222286267,0.729819156862664,0,2.91336455440911,0,0,0,0.063186579628488,1.20258735531594,0.829505531177977,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.775912131907355,0,104.629082981387,0,0,2.91229661397042,0,0,0,0.999048047910651,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0.101998217636322,0,4.20294202096853,1.50595916781192,0,0,7.62373327410012,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.63444087333891,3.05430982083536,0.412618309791701,0.83088067605837,0,10.0594254092533,3.15897694621728,0,0.315222829196793,0.157363764404994,0,0.179287339332845,0,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,4.65418642901582,3.43804764530994,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,3.54427271986794,2.56255156294123,1.502291168478,1.72022758707021,1.88579387612649,3.16691655001056,51.7423894661503,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0.521745061811734,0,0,0.406870733204662,0,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9623777700223,0,1.10606748921385,0.779441235357554,0.265729680626726,1.1449577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| |||
|short_description=p2@CDHR1 | |||
}} |
Revision as of 14:43, 10 September 2013
Short description: | p2@CDHR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CDHR1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000332904, ENST00000372117, NM_001171971, NM_033100_5end |
EntrezGene: | CDHR1 |
HGNC: | 14550 |
UniProt: | F1T0L2Q96JP9B3KWC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.25e-14 | 10 |
nephron tubule epithelial cell | 1.25e-14 | 10 |
epithelial cell of nephron | 1.08e-12 | 15 |
kidney cell | 8.36e-11 | 17 |
kidney epithelial cell | 8.36e-11 | 17 |
kidney cortical cell | 4.98e-09 | 12 |
renal cortical epithelial cell | 4.98e-09 | 12 |
respiratory epithelial cell | 6.28e-08 | 13 |
transitional epithelial cell | 1.90e-07 | 4 |
urothelial cell | 1.90e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.