FFCP PHASE1:Hg19::chr12:16762802..16762821,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55885|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6643|TSSclassifier=S|UniProt=|association_with_transcript=1bp_to_ENST00000534946_5end|coexpression_cluster_id=C3|description=CAGE_peak_22_at_LMO3_5end|id=chr12:16762802..16762821,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;6.05e-12;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.32e-71!57;UBERON:0005068!2.32e-71!57;UBERON:0006241!2.32e-71!57;UBERON:0007135!2.32e-71!57;UBERON:0002780!6.52e-70!41;UBERON:0001890!6.52e-70!41;UBERON:0006240!6.52e-70!41;UBERON:0002616!1.13e-68!59;UBERON:0003080!4.24e-68!42;UBERON:0001017!3.72e-65!82;UBERON:0001893!9.38e-64!34;UBERON:0000955!1.01e-63!69;UBERON:0006238!1.01e-63!69;UBERON:0002020!1.19e-63!34;UBERON:0003528!1.19e-63!34;UBERON:0001869!5.64e-63!32;UBERON:0005743!1.00e-61!86;UBERON:0002791!1.71e-60!33;UBERON:0002619!6.97e-59!22;UBERON:0001950!1.27e-58!20;UBERON:0000073!7.10e-58!94;UBERON:0001016!7.10e-58!94;UBERON:0007023!2.14e-54!115;UBERON:0000956!1.86e-51!25;UBERON:0000203!1.86e-51!25;UBERON:0003075!4.51e-50!86;UBERON:0007284!4.51e-50!86;UBERON:0002346!1.90e-47!90;UBERON:0003056!9.14e-45!61;UBERON:0000153!5.06e-36!129;UBERON:0007811!5.06e-36!129;UBERON:0000033!3.66e-34!123;UBERON:0004121!4.25e-28!169;UBERON:0000924!3.18e-27!173;UBERON:0006601!3.18e-27!173;UBERON:0000200!1.41e-22!6;UBERON:0001871!8.90e-22!7;UBERON:0001872!2.53e-18!5;UBERON:0000025!4.99e-17!194;UBERON:0002298!4.86e-15!8;UBERON:0002420!6.84e-14!9;UBERON:0007245!6.84e-14!9;UBERON:0010009!6.84e-14!9;UBERON:0010011!6.84e-14!9;UBERON:0000454!6.84e-14!9;UBERON:0002308!1.29e-13!9;UBERON:0000125!1.29e-13!9;UBERON:0004111!7.51e-13!241;UBERON:0002771!3.41e-12!3;UBERON:0000349!6.01e-12!5;UBERON:0000477!8.37e-12!286;UBERON:0002021!1.14e-11!5;UBERON:0000988!2.53e-11!3;UBERON:0000064!4.04e-11!219;UBERON:0000483!6.30e-11!309;UBERON:0000119!9.98e-11!312;UBERON:0001896!1.11e-10!3;UBERON:0005290!1.11e-10!3;UBERON:0010096!1.11e-10!3;UBERON:0004733!8.36e-10!12;UBERON:0002028!8.36e-10!12;UBERON:0007277!8.36e-10!12;UBERON:0004732!5.35e-09!13;UBERON:0000369!6.52e-09!4;UBERON:0002435!6.52e-09!4;UBERON:0000204!6.52e-09!4;UBERON:0010082!6.52e-09!4;UBERON:0001870!7.96e-09!2;UBERON:0000475!2.04e-08!365;UBERON:0009663!2.30e-08!7;UBERON:0001876!2.75e-08!2;UBERON:0000007!4.37e-08!2;UBERON:0001894!4.84e-08!7;UBERON:0006222!4.84e-08!7;UBERON:0002148!7.39e-08!2;UBERON:0009662!7.39e-08!2;UBERON:0002360!9.75e-08!2;UBERON:0000094!9.75e-08!2;UBERON:0007645!9.75e-08!2;UBERON:0003076!1.04e-07!15;UBERON:0003057!1.04e-07!15;UBERON:0000481!2.49e-07!347|ontology_enrichment_uberon_v019=UBERON:0000200;9.16e-60;6!UBERON:0001950;9.13e-56;20!UBERON:0002619;8.57e-51;22!UBERON:0001869;1.96e-49;32!UBERON:0001893;2.24e-46;34!UBERON:0000956;9.10e-45;25!UBERON:0000203;9.10e-45;25!UBERON:0002791;3.17e-43;32!UBERON:0003528;1.19e-41;34!UBERON:0002020;1.19e-41;34!UBERON:0002780;7.70e-35;41!UBERON:0001890;7.70e-35;41!UBERON:0001870;1.76e-31;3!UBERON:0000073;8.79e-30;53!UBERON:0002616;8.79e-30;53!UBERON:0002702;9.62e-22;2!UBERON:0002771;4.03e-21;2!UBERON:0001017;2.39e-19;75!UBERON:0000955;5.88e-19;68!UBERON:0001872;1.82e-18;5!UBERON:0001016;1.14e-16;83!UBERON:0001871;1.93e-13;6!UBERON:0001882;1.52e-11;1!UBERON:0003112;1.52e-11;1!UBERON:0011158;1.52e-11;1!UBERON:0003128;1.52e-11;1!UBERON:0005403;1.52e-11;1!UBERON:0001703;1.52e-11;1!UBERON:0002241;1.52e-11;1!UBERON:0002581;3.63e-11;1!UBERON:0002902;3.63e-11;1!UBERON:0002022;3.63e-11;1!UBERON:0009899;3.63e-11;1!UBERON:0007190;3.63e-11;1!UBERON:0000369;5.86e-11;4!UBERON:0002435;5.86e-11;4!UBERON:0000204;5.86e-11;4!UBERON:0002420;1.60e-10;9!UBERON:0007245;1.60e-10;9!UBERON:0010009;1.60e-10;9!UBERON:0010011;1.60e-10;9!UBERON:0000454;1.60e-10;9!UBERON:0011216;5.86e-09;132!UBERON:0000349;6.06e-09;5!UBERON:0007023;1.55e-08;114|ontology_enrichment_uberon_v019_2=UBERON:0000200,4.52e-60,6;UBERON:0001869,4.71e-57,32;UBERON:0001950,6.01e-56,20;UBERON:0001893,1.10e-53,34;UBERON:0002780,5.30e-51,41;UBERON:0001890,5.30e-51,41;UBERON:0003080,5.30e-51,41;UBERON:0006240,5.30e-51,41;UBERON:0002619,5.85e-51,22;UBERON:0002791,4.44e-49,32;UBERON:0003528,3.59e-46,34;UBERON:0002020,3.59e-46,34;UBERON:0000956,6.50e-45,25;UBERON:0000203,6.50e-45,25;UBERON:0000073,8.27e-45,53;UBERON:0002616,8.27e-45,53;UBERON:0001049,2.47e-42,56;UBERON:0005068,2.47e-42,56;UBERON:0006241,2.47e-42,56;UBERON:0007135,2.47e-42,56;UBERON:0001017,1.12e-40,81;UBERON:0000955,1.04e-38,68;UBERON:0006238,1.04e-38,68;UBERON:0001016,1.84e-36,89;UBERON:0003056,7.19e-34,61;UBERON:0001870,1.30e-31,3;UBERON:0003075,2.30e-28,82;UBERON:0007284,2.30e-28,82;UBERON:0002346,5.90e-27,86;UBERON:0007023,9.01e-26,114;UBERON:0010371,6.20e-22,104;UBERON:0002702,9.15e-22,2;UBERON:0002771,4.25e-21,2;UBERON:0010314,3.20e-19,132;UBERON:0001872,1.39e-18,5;UBERON:0004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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55885 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6643 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000534946_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_22_at_LMO3_5end | |||
|id=chr12:16762802..16762821,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.05e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p22@LMO3 | |||
}} |
Revision as of 22:01, 10 September 2013
Short description: | p22@LMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_LMO3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 1bp_to_ENST00000534946_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.