FFCP PHASE1:Hg19::chr12:113599286..113599309,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79039|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20084|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000549271_5end|coexpression_cluster_id=C35|description=CAGE_peak_4_at_DDX54_5end|id=chr12:113599286..113599309,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000785;2.50e-09;1!CL:0000819;2.50e-09;1|ontology_enrichment_celltype_v019_2=CL:0000819,2.40e-09,1|ontology_enrichment_development_v019=UBERON:0010122;3.43e-17;2!UBERON:0006601;7.17e-12;82!UBERON:0006222;1.60e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060073;2.50e-09;1!DOID:8675;2.50e-09;1|ontology_enrichment_disease_v019_2=DOID:0060073,2.40e-09,1;DOID:8675,2.40e-09,1|ontology_enrichment_uberon=UBERON:0002020!2.37e-63!34;UBERON:0003528!2.37e-63!34;UBERON:0001893!3.49e-63!34;UBERON:0002791!1.95e-60!33;UBERON:0002780!8.74e-60!41;UBERON:0001890!8.74e-60!41;UBERON:0006240!8.74e-60!41;UBERON:0000955!3.63e-59!69;UBERON:0006238!3.63e-59!69;UBERON:0001869!2.05e-58!32;UBERON:0003080!3.43e-58!42;UBERON:0001049!1.39e-56!57;UBERON:0005068!1.39e-56!57;UBERON:0006241!1.39e-56!57;UBERON:0007135!1.39e-56!57;UBERON:0002616!3.66e-54!59;UBERON:0001017!7.16e-54!82;UBERON:0005743!1.42e-53!86;UBERON:0000073!1.57e-47!94;UBERON:0001016!1.57e-47!94;UBERON:0003056!4.16e-46!61;UBERON:0002619!1.06e-44!22;UBERON:0003075!9.26e-44!86;UBERON:0007284!9.26e-44!86;UBERON:0002346!2.30e-41!90;UBERON:0001950!4.66e-39!20;UBERON:0000956!6.47e-39!25;UBERON:0000203!6.47e-39!25;UBERON:0000033!4.26e-36!123;UBERON:0000153!6.52e-34!129;UBERON:0007811!6.52e-34!129;UBERON:0007023!1.07e-30!115;UBERON:0002420!1.10e-27!9;UBERON:0007245!1.10e-27!9;UBERON:0010009!1.10e-27!9;UBERON:0010011!1.10e-27!9;UBERON:0000454!1.10e-27!9;UBERON:0002308!5.99e-27!9;UBERON:0000125!5.99e-27!9;UBERON:0004121!1.92e-24!169;UBERON:0000924!1.27e-23!173;UBERON:0006601!1.27e-23!173;UBERON:0009663!8.17e-22!7;UBERON:0000349!2.31e-16!5;UBERON:0001872!2.11e-15!5;UBERON:0001871!5.84e-14!7;UBERON:0000369!8.57e-14!4;UBERON:0002435!8.57e-14!4;UBERON:0000204!8.57e-14!4;UBERON:0010082!8.57e-14!4;UBERON:0000200!5.65e-13!6;UBERON:0000025!7.45e-12!194;UBERON:0005383!8.17e-11!3;UBERON:0005382!8.17e-11!3;UBERON:0002771!4.61e-10!3;UBERON:0002021!5.01e-10!5;UBERON:0000064!1.97e-09!219;UBERON:0006331!2.50e-09!3;UBERON:0000988!4.70e-09!3;UBERON:0002298!1.17e-08!8;UBERON:0004111!1.82e-08!241;UBERON:0000475!7.86e-08!365;UBERON:0001873!8.88e-08!2;UBERON:0010122!8.88e-08!2;UBERON:0001876!1.43e-07!2;UBERON:0000477!1.71e-07!286;UBERON:0001954!1.72e-07!2;UBERON:0003022!1.72e-07!2;UBERON:0002421!1.72e-07!2;UBERON:0002600!1.72e-07!2;UBERON:0001875!2.82e-07!2;UBERON:0006514!2.82e-07!2;UBERON:0002148!7.85e-07!2;UBERON:0009662!7.85e-07!2;UBERON:0000483!9.44e-07!309|ontology_enrichment_uberon_v019=UBERON:0001869;5.84e-91;32!UBERON:0002791;1.23e-83;32!UBERON:0001893;9.45e-83;34!UBERON:0003528;2.51e-71;34!UBERON:0002020;2.51e-71;34!UBERON:0002780;5.67e-69;41!UBERON:0001890;5.67e-69;41!UBERON:0002619;1.68e-62;22!UBERON:0000956;5.16e-55;25!UBERON:0000203;5.16e-55;25!UBERON:0002420;1.26e-54;9!UBERON:0007245;1.26e-54;9!UBERON:0010009;1.26e-54;9!UBERON:0010011;1.26e-54;9!UBERON:0000454;1.26e-54;9!UBERON:0001950;3.51e-50;20!UBERON:0009663;6.63e-40;7!UBERON:0000349;5.45e-39;5!UBERON:0000073;1.47e-36;53!UBERON:0002616;1.47e-36;53!UBERON:0000369;2.08e-32;4!UBERON:0002435;2.08e-32;4!UBERON:0000204;2.08e-32;4!UBERON:0000955;3.30e-31;68!UBERON:0000125;5.82e-31;9!UBERON:0002308;5.82e-31;9!UBERON:0001017;4.35e-26;75!UBERON:0005383;7.43e-25;3!UBERON:0005382;7.43e-25;3!UBERON:0000200;1.86e-20;6!UBERON:0001871;3.83e-18;6!UBERON:0001873;3.43e-17;2!UBERON:0001876;1.00e-16;2!UBERON:0001954;1.60e-16;2!UBERON:0003022;1.60e-16;2!UBERON:0002421;1.60e-16;2!UBERON:0002600;1.60e-16;2!UBERON:0001016;1.85e-16;83!UBERON:0001875;5.13e-16;2!UBERON:0006514;5.13e-16;2!UBERON:0002021;3.99e-14;5!UBERON:0001870;3.42e-11;3!UBERON:0007023;9.58e-10;114!UBERON:0001874;1.96e-09;1!UBERON:0001882;2.50e-09;1!UBERON:0005403;2.50e-09;1!UBERON:0002022;3.58e-09;1!UBERON:0002581;7.26e-09;1!UBERON:0002902;7.26e-09;1!UBERON:0009899;7.26e-09;1!UBERON:0007190;7.26e-09;1!UBERON:0011216;8.33e-08;132!UBERON:0010314;8.38e-08;132!UBERON:0001872;6.18e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.25e-98,32;UBERON:0002780,7.19e-93,41;UBERON:0001890,7.19e-93,41;UBERON:0003080,7.19e-93,41;UBERON:0006240,7.19e-93,41;UBERON:0001893,8.43e-93,34;UBERON:0002791,2.00e-89,32;UBERON:0003528,3.96e-84,34;UBERON:0002020,3.96e-84,34;UBERON:0000073,1.92e-71,53;UBERON:0002616,1.92e-71,53;UBERON:0001049,1.70e-67,56;UBERON:0005068,1.70e-67,56;UBERON:0006241,1.70e-67,56;UBERON:0007135,1.70e-67,56;UBERON:0002619,2.46e-62,22;UBERON:0003056,9.21e-62,61;UBERON:0000955,2.26e-59,68;UBERON:0006238,2.26e-59,68;UBERON:0000956,7.23e-55,25;UBERON:0000203,7.23e-55,25;UBERON:0002420,1.62e-54,9;UBERON:0007245,1.62e-54,9;UBERON:0010009,1.62e-54,9;UBERON:0010011,1.62e-54,9;UBERON:0000454,1.62e-54,9;UBERO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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79039 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20084 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000549271_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_4_at_DDX54_5end | |||
|id=chr12:113599286..113599309,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000785;2.50e-09;1!CL:0000819;2.50e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.40e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.43e-17;2!UBERON:0006601;7.17e-12;82!UBERON:0006222;1.60e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.50e-09;1!DOID:8675;2.50e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.40e-09,1;DOID:8675,2.40e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002020!2.37e-63!34;UBERON:0003528!2.37e-63!34;UBERON:0001893!3.49e-63!34;UBERON:0002791!1.95e-60!33;UBERON:0002780!8.74e-60!41;UBERON:0001890!8.74e-60!41;UBERON:0006240!8.74e-60!41;UBERON:0000955!3.63e-59!69;UBERON:0006238!3.63e-59!69;UBERON:0001869!2.05e-58!32;UBERON:0003080!3.43e-58!42;UBERON:0001049!1.39e-56!57;UBERON:0005068!1.39e-56!57;UBERON:0006241!1.39e-56!57;UBERON:0007135!1.39e-56!57;UBERON:0002616!3.66e-54!59;UBERON:0001017!7.16e-54!82;UBERON:0005743!1.42e-53!86;UBERON:0000073!1.57e-47!94;UBERON:0001016!1.57e-47!94;UBERON:0003056!4.16e-46!61;UBERON:0002619!1.06e-44!22;UBERON:0003075!9.26e-44!86;UBERON:0007284!9.26e-44!86;UBERON:0002346!2.30e-41!90;UBERON:0001950!4.66e-39!20;UBERON:0000956!6.47e-39!25;UBERON:0000203!6.47e-39!25;UBERON:0000033!4.26e-36!123;UBERON:0000153!6.52e-34!129;UBERON:0007811!6.52e-34!129;UBERON:0007023!1.07e-30!115;UBERON:0002420!1.10e-27!9;UBERON:0007245!1.10e-27!9;UBERON:0010009!1.10e-27!9;UBERON:0010011!1.10e-27!9;UBERON:0000454!1.10e-27!9;UBERON:0002308!5.99e-27!9;UBERON:0000125!5.99e-27!9;UBERON:0004121!1.92e-24!169;UBERON:0000924!1.27e-23!173;UBERON:0006601!1.27e-23!173;UBERON:0009663!8.17e-22!7;UBERON:0000349!2.31e-16!5;UBERON:0001872!2.11e-15!5;UBERON:0001871!5.84e-14!7;UBERON:0000369!8.57e-14!4;UBERON:0002435!8.57e-14!4;UBERON:0000204!8.57e-14!4;UBERON:0010082!8.57e-14!4;UBERON:0000200!5.65e-13!6;UBERON:0000025!7.45e-12!194;UBERON:0005383!8.17e-11!3;UBERON:0005382!8.17e-11!3;UBERON:0002771!4.61e-10!3;UBERON:0002021!5.01e-10!5;UBERON:0000064!1.97e-09!219;UBERON:0006331!2.50e-09!3;UBERON:0000988!4.70e-09!3;UBERON:0002298!1.17e-08!8;UBERON:0004111!1.82e-08!241;UBERON:0000475!7.86e-08!365;UBERON:0001873!8.88e-08!2;UBERON:0010122!8.88e-08!2;UBERON:0001876!1.43e-07!2;UBERON:0000477!1.71e-07!286;UBERON:0001954!1.72e-07!2;UBERON:0003022!1.72e-07!2;UBERON:0002421!1.72e-07!2;UBERON:0002600!1.72e-07!2;UBERON:0001875!2.82e-07!2;UBERON:0006514!2.82e-07!2;UBERON:0002148!7.85e-07!2;UBERON:0009662!7.85e-07!2;UBERON:0000483!9.44e-07!309 | |||
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|short_description=p4@DDX54 | |||
}} |
Revision as of 20:59, 10 September 2013
Short description: | p4@DDX54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_DDX54_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000549271_5end |
EntrezGene: | DDX54 |
HGNC: | 20084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.40e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.40e-09 | 1 |
lymphosarcoma | 2.40e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.