FFCP PHASE1:Hg19::chr17:25887330..25887369,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8844|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6465|TSSclassifier=S|UniProt=Q6ZNT2|association_with_transcript=0bp_to_ENST00000398985,uc002gzl.1_5end|description=CAGE_peak_2_at_KSR1_5end|id=chr17:25887330..25887369,+|ontology_enrichment_celltype=CL:0000222!4.90e-25!119;CL:0000187!2.18e-17!54;CL:0000183!4.03e-17!59;CL:0000680!1.04e-15!57;CL:0000056!1.04e-15!57;CL:0000355!1.04e-15!57;CL:0000115!1.03e-14!35;CL:0002139!1.69e-14!24;CL:0000393!4.98e-14!60;CL:0000211!4.98e-14!60;CL:0000055!1.05e-13!180;CL:0000192!1.66e-13!42;CL:0000514!1.66e-13!42;CL:0002078!4.74e-12!44;CL:0000071!5.56e-12!18;CL:0002546!5.56e-12!18;CL:0000359!2.25e-11!32;CL:0000213!2.60e-11!57;CL:0000215!2.60e-11!57;CL:0000220!1.75e-10!246;CL:0002321!4.79e-10!248;CL:1000413!4.07e-07!9|ontology_enrichment_celltype_v019=CL:0002139;7.35e-19;24!CL:0000115;6.16e-17;36!CL:0000071;3.49e-16;18!CL:0000359;3.50e-14;32!CL:0000192;3.87e-11;43!CL:0000187;1.43e-10;55!CL:0002078;2.13e-10;45!CL:1000413;2.68e-09;9!CL:0000213;4.11e-09;58!CL:0000215;4.11e-09;58!CL:0000393;1.19e-08;61!CL:0000211;1.19e-08;61!CL:0002539;7.87e-08;10!CL:0002543;5.59e-07;6|ontology_enrichment_celltype_v019_2=CL:0000222,3.08e-28,121;CL:0000115,9.55e-21,36;CL:0000187,2.04e-19,55;CL:0002139,3.81e-19,24;CL:0000680,1.23e-17,58;CL:0000056,1.23e-17,58;CL:0000355,1.23e-17,58;CL:0000071,1.96e-16,18;CL:0002546,1.96e-16,18;CL:0002078,4.08e-16,45;CL:0000393,4.79e-16,61;CL:0000211,4.79e-16,61;CL:0000192,1.56e-15,43;CL:0000514,1.56e-15,43;CL:0000359,3.55e-14,32;CL:0000213,4.15e-13,58;CL:0000215,4.15e-13,58;CL:1000413,1.69e-09,9;CL:0002321,1.80e-08,250;CL:0002539,7.37e-08,10;CL:0002543,4.98e-07,6|ontology_enrichment_development_v019=CL:0002546;3.49e-16;18!CL:0000514;3.87e-11;43!CL:0000355;6.55e-10;58!CL:0000222;3.37e-08;121|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;1.15e-07;14|ontology_enrichment_disease_v019_2=DOID:2394,7.62e-08,14|ontology_enrichment_uberon=UBERON:0004872!1.13e-34!84;UBERON:0002049!1.95e-34!79;UBERON:0007798!1.95e-34!79;UBERON:0000055!1.61e-31!69;UBERON:0000119!3.10e-29!312;UBERON:0001981!7.63e-29!60;UBERON:0007500!7.63e-29!60;UBERON:0004537!7.63e-29!60;UBERON:0006965!7.63e-29!60;UBERON:0001009!2.77e-28!113;UBERON:0000483!7.06e-28!309;UBERON:0003914!1.41e-27!118;UBERON:0004535!1.50e-27!110;UBERON:0000025!7.22e-25!194;UBERON:0004111!8.71e-25!241;UBERON:0000477!1.75e-24!286;UBERON:0000490!2.04e-22!138;UBERON:0001637!9.65e-20!42;UBERON:0003509!9.65e-20!42;UBERON:0004572!9.65e-20!42;UBERON:0002385!4.55e-18!63;UBERON:0001015!4.55e-18!63;UBERON:0000383!4.55e-18!63;UBERON:0001134!3.51e-17!61;UBERON:0002036!3.51e-17!61;UBERON:0003082!3.51e-17!61;UBERON:0004290!1.37e-16!70;UBERON:0004573!6.18e-15!33;UBERON:0004571!6.18e-15!33;UBERON:0000481!2.92e-14!347;UBERON:0000486!6.66e-14!82;UBERON:0005256!7.51e-14!143;UBERON:0000914!1.56e-13!83;UBERON:0002329!1.56e-13!83;UBERON:0003077!1.56e-13!83;UBERON:0003059!1.56e-13!83;UBERON:0007282!1.56e-13!83;UBERON:0009618!1.56e-13!83;UBERON:0007285!1.56e-13!83;UBERON:0000475!1.13e-12!365;UBERON:0000468!3.08e-12!659;UBERON:0001986!5.56e-12!18;UBERON:0004638!5.56e-12!18;UBERON:0004852!5.56e-12!18;UBERON:0000487!9.60e-12!22;UBERON:0000947!3.52e-11!21;UBERON:0010191!3.52e-11!21;UBERON:0007100!6.30e-11!27;UBERON:0006914!6.83e-11!25;UBERON:0000467!8.88e-11!625;UBERON:0000480!1.34e-10!626;UBERON:0000948!2.19e-10!24;UBERON:0005498!2.19e-10!24;UBERON:0004140!2.19e-10!24;UBERON:0009881!2.19e-10!24;UBERON:0004141!2.19e-10!24;UBERON:0003084!2.19e-10!24;UBERON:0007005!2.19e-10!24;UBERON:0004139!2.19e-10!24;UBERON:0004291!2.19e-10!24;UBERON:0002100!6.32e-10!216;UBERON:0007023!6.58e-09!115;UBERON:0002050!1.94e-08!605;UBERON:0005423!1.94e-08!605;UBERON:0000923!2.68e-08!604;UBERON:0005291!2.68e-08!604;UBERON:0006598!2.68e-08!604;UBERON:0002532!2.68e-08!604;UBERON:0000922!2.88e-08!612;UBERON:0003103!3.20e-08!69;UBERON:0003104!5.09e-08!238;UBERON:0009142!5.09e-08!238;UBERON:0003915!4.07e-07!9;UBERON:0004700!4.07e-07!9;UBERON:0001917!4.07e-07!9;UBERON:0001135!4.26e-07!15;UBERON:0001048!7.36e-07!168|ontology_enrichment_uberon_v019=UBERON:0001637;1.10e-20;42!UBERON:0003509;1.10e-20;42!UBERON:0004572;1.10e-20;42!UBERON:0007500;6.15e-20;56!UBERON:0001981;6.15e-20;56!UBERON:0004537;6.15e-20;56!UBERON:0000055;2.09e-19;65!UBERON:0004573;6.32e-19;33!UBERON:0004571;6.32e-19;33!UBERON:0002049;1.64e-16;75!UBERON:0007798;1.64e-16;75!UBERON:0004638;3.49e-16;18!UBERON:0001986;3.49e-16;18!UBERON:0004852;3.49e-16;18!UBERON:0000947;2.03e-15;21!UBERON:0010191;2.03e-15;21!UBERON:0000487;3.74e-15;22!UBERON:0006914;1.30e-13;25!UBERON:0003914;1.91e-12;74!UBERON:0002385;1.55e-11;31!UBERON:0001015;1.55e-11;31!UBERON:0000383;1.55e-11;31!UBERON:0004535;4.70e-11;109!UBERON:0001009;3.48e-10;112!UBERON:0000948;7.09e-10;22!UBERON:0003915;2.68e-09;9!UBERON:0004700;2.68e-09;9!UBERON:0001917;2.68e-09;9!UBERON:0007100;3.80e-09;25!UBERON:0000490;7.68e-09;33!UBERON:0000025;1.08e-08;93!UBERON:0001135;1.08e-08;15!UBE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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8844 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6465 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZNT2 | |||
|association_with_transcript=0bp_to_ENST00000398985,uc002gzl.1_5end | |||
|description=CAGE_peak_2_at_KSR1_5end | |||
|id=chr17:25887330..25887369,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.90e-25!119;CL:0000187!2.18e-17!54;CL:0000183!4.03e-17!59;CL:0000680!1.04e-15!57;CL:0000056!1.04e-15!57;CL:0000355!1.04e-15!57;CL:0000115!1.03e-14!35;CL:0002139!1.69e-14!24;CL:0000393!4.98e-14!60;CL:0000211!4.98e-14!60;CL:0000055!1.05e-13!180;CL:0000192!1.66e-13!42;CL:0000514!1.66e-13!42;CL:0002078!4.74e-12!44;CL:0000071!5.56e-12!18;CL:0002546!5.56e-12!18;CL:0000359!2.25e-11!32;CL:0000213!2.60e-11!57;CL:0000215!2.60e-11!57;CL:0000220!1.75e-10!246;CL:0002321!4.79e-10!248;CL:1000413!4.07e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.35e-19;24!CL:0000115;6.16e-17;36!CL:0000071;3.49e-16;18!CL:0000359;3.50e-14;32!CL:0000192;3.87e-11;43!CL:0000187;1.43e-10;55!CL:0002078;2.13e-10;45!CL:1000413;2.68e-09;9!CL:0000213;4.11e-09;58!CL:0000215;4.11e-09;58!CL:0000393;1.19e-08;61!CL:0000211;1.19e-08;61!CL:0002539;7.87e-08;10!CL:0002543;5.59e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.08e-28,121;CL:0000115,9.55e-21,36;CL:0000187,2.04e-19,55;CL:0002139,3.81e-19,24;CL:0000680,1.23e-17,58;CL:0000056,1.23e-17,58;CL:0000355,1.23e-17,58;CL:0000071,1.96e-16,18;CL:0002546,1.96e-16,18;CL:0002078,4.08e-16,45;CL:0000393,4.79e-16,61;CL:0000211,4.79e-16,61;CL:0000192,1.56e-15,43;CL:0000514,1.56e-15,43;CL:0000359,3.55e-14,32;CL:0000213,4.15e-13,58;CL:0000215,4.15e-13,58;CL:1000413,1.69e-09,9;CL:0002321,1.80e-08,250;CL:0002539,7.37e-08,10;CL:0002543,4.98e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.49e-16;18!CL:0000514;3.87e-11;43!CL:0000355;6.55e-10;58!CL:0000222;3.37e-08;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.15e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.62e-08,14 | |||
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| |||
|short_description=p2@KSR1 | |||
}} |
Revision as of 12:41, 11 September 2013
Short description: | p2@KSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_KSR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000398985, uc002gzl.1_5end |
EntrezGene: | KSR1 |
HGNC: | 6465 |
UniProt: | Q6ZNT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.08e-28 | 121 |
endothelial cell | 9.55e-21 | 36 |
muscle cell | 2.04e-19 | 55 |
endothelial cell of vascular tree | 3.81e-19 | 24 |
muscle precursor cell | 1.23e-17 | 58 |
myoblast | 1.23e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-17 | 58 |
blood vessel endothelial cell | 1.96e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.96e-16 | 18 |
meso-epithelial cell | 4.08e-16 | 45 |
electrically responsive cell | 4.79e-16 | 61 |
electrically active cell | 4.79e-16 | 61 |
smooth muscle cell | 1.56e-15 | 43 |
smooth muscle myoblast | 1.56e-15 | 43 |
vascular associated smooth muscle cell | 3.55e-14 | 32 |
lining cell | 4.15e-13 | 58 |
barrier cell | 4.15e-13 | 58 |
endothelial cell of artery | 1.69e-09 | 9 |
embryonic cell | 1.80e-08 | 250 |
aortic smooth muscle cell | 7.37e-08 | 10 |
vein endothelial cell | 4.98e-07 | 6 |
Ontology term | p-value | n |
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.