FFCP PHASE1:Hg19::chr9:139874630..139874648,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5730|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9592|TSSclassifier=S|UniProt=|association_with_transcript=-58bp_to_ENST00000444903_5end|coexpression_cluster_id=C485|description=CAGE_peak_11_at_PTGDS_5end|id=chr9:139874630..139874648,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002575;2.43e-09;2|ontology_enrichment_celltype_v019_2=CL:0002575,2.39e-09,2|ontology_enrichment_development_v019=UBERON:0006241;1.03e-12;3!UBERON:0003057;1.03e-12;3!UBERON:0006601;1.09e-10;82!UBERON:0007297;2.80e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.10e-74!115;UBERON:0001049!3.03e-44!57;UBERON:0005068!3.03e-44!57;UBERON:0006241!3.03e-44!57;UBERON:0007135!3.03e-44!57;UBERON:0002616!6.29e-43!59;UBERON:0001017!1.25e-38!82;UBERON:0005743!6.85e-38!86;UBERON:0000955!7.24e-38!69;UBERON:0006238!7.24e-38!69;UBERON:0002780!1.36e-35!41;UBERON:0001890!1.36e-35!41;UBERON:0006240!1.36e-35!41;UBERON:0003080!1.76e-34!42;UBERON:0000073!1.94e-34!94;UBERON:0001016!1.94e-34!94;UBERON:0003075!8.28e-34!86;UBERON:0007284!8.28e-34!86;UBERON:0002346!1.46e-31!90;UBERON:0002020!3.87e-31!34;UBERON:0003528!3.87e-31!34;UBERON:0001893!8.38e-31!34;UBERON:0002791!7.65e-30!33;UBERON:0001869!4.04e-28!32;UBERON:0002619!1.70e-23!22;UBERON:0003056!3.21e-23!61;UBERON:0001950!6.73e-21!20;UBERON:0000033!1.84e-20!123;UBERON:0000956!5.27e-20!25;UBERON:0000203!5.27e-20!25;UBERON:0000153!1.13e-19!129;UBERON:0007811!1.13e-19!129;UBERON:0004121!6.03e-19!169;UBERON:0000924!4.37e-18!173;UBERON:0006601!4.37e-18!173;UBERON:0002420!3.47e-13!9;UBERON:0007245!3.47e-13!9;UBERON:0010009!3.47e-13!9;UBERON:0010011!3.47e-13!9;UBERON:0000454!3.47e-13!9;UBERON:0002308!4.66e-13!9;UBERON:0000125!4.66e-13!9;UBERON:0000025!2.05e-12!194;UBERON:0000477!3.86e-12!286;UBERON:0000062!1.81e-11!511;UBERON:0004111!6.64e-11!241;UBERON:0003076!1.07e-10!15;UBERON:0003057!1.07e-10!15;UBERON:0000064!1.18e-10!219;UBERON:0009663!1.82e-10!7;UBERON:0001871!9.41e-09!7;UBERON:0002298!1.36e-08!8;UBERON:0000200!3.44e-08!6;UBERON:0004732!3.60e-08!13;UBERON:0000349!5.89e-08!5;UBERON:0000475!7.71e-08!365;UBERON:0000483!1.02e-07!309;UBERON:0000119!1.78e-07!312;UBERON:0001872!3.41e-07!5;UBERON:0004733!6.91e-07!12;UBERON:0002028!6.91e-07!12;UBERON:0007277!6.91e-07!12|ontology_enrichment_uberon_v019=UBERON:0007023;2.64e-18;114!UBERON:0002780;1.91e-16;41!UBERON:0001890;1.91e-16;41!UBERON:0000073;1.03e-14;53!UBERON:0002616;1.03e-14;53!UBERON:0001894;7.35e-14;7!UBERON:0002240;1.03e-12;3!UBERON:0005174;1.03e-12;3!UBERON:0001137;1.03e-12;3!UBERON:0001017;1.43e-12;75!UBERON:0001016;4.99e-12;83!UBERON:0000955;2.94e-11;68!UBERON:0001893;5.97e-11;34!UBERON:0002791;9.97e-11;32!UBERON:0003528;1.40e-10;34!UBERON:0002020;1.40e-10;34!UBERON:0002420;2.44e-10;9!UBERON:0000125;2.44e-10;9!UBERON:0007245;2.44e-10;9!UBERON:0002308;2.44e-10;9!UBERON:0010009;2.44e-10;9!UBERON:0010011;2.44e-10;9!UBERON:0000454;2.44e-10;9!UBERON:0001869;1.96e-09;32!UBERON:0002784;4.10e-09;4!UBERON:0002360;7.41e-09;2!UBERON:0005162;7.41e-09;2!UBERON:0000122;7.41e-09;2!UBERON:0000094;7.41e-09;2!UBERON:0010743;7.41e-09;2!UBERON:0009663;8.88e-09;7!UBERON:0001897;9.74e-09;2!UBERON:0010225;9.74e-09;2!UBERON:0001954;3.24e-08;2!UBERON:0001875;3.24e-08;2!UBERON:0003022;3.24e-08;2!UBERON:0002421;3.24e-08;2!UBERON:0006514;3.24e-08;2!UBERON:0002600;3.24e-08;2!UBERON:0000349;3.11e-07;5!UBERON:0002619;3.66e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.79e-59,114;UBERON:0001049,9.81e-30,56;UBERON:0005068,9.81e-30,56;UBERON:0006241,9.81e-30,56;UBERON:0007135,9.81e-30,56;UBERON:0003075,4.03e-27,82;UBERON:0007284,4.03e-27,82;UBERON:0001017,4.86e-27,81;UBERON:0001016,6.27e-26,89;UBERON:0002346,1.45e-25,86;UBERON:0000073,3.98e-23,53;UBERON:0002616,3.98e-23,53;UBERON:0002780,4.24e-22,41;UBERON:0001890,4.24e-22,41;UBERON:0003080,4.24e-22,41;UBERON:0006240,4.24e-22,41;UBERON:0000955,7.68e-21,68;UBERON:0006238,7.68e-21,68;UBERON:0010314,2.44e-20,132;UBERON:0010371,4.93e-20,104;UBERON:0003056,1.23e-17,61;UBERON:0001894,6.52e-14,7;UBERON:0006222,6.52e-14,7;UBERON:0004121,8.23e-14,171;UBERON:0000924,8.23e-14,171;UBERON:0006601,8.23e-14,171;UBERON:0003528,4.93e-13,34;UBERON:0002020,4.93e-13,34;UBERON:0001893,6.24e-13,34;UBERON:0002240,7.65e-13,3;UBERON:0005174,7.65e-13,3;UBERON:0001137,7.65e-13,3;UBERON:0002791,1.17e-11,32;UBERON:0000025,1.14e-10,192;UBERON:0002420,1.75e-10,9;UBERON:0007245,1.75e-10,9;UBERON:0010009,1.75e-10,9;UBERON:0010011,1.75e-10,9;UBERON:0000454,1.75e-10,9;UBERON:0000125,2.15e-10,9;UBERON:0002308,2.15e-10,9;UBERON:0011216,1.26e-09,223;UBERON:0001869,1.55e-09,32;UBERON:0002784,3.47e-09,4;UBERON:0002360,6.73e-09,2;UBERON:0000094,6.73e-09,2;UBERON:0010743,6.73e-09,2;UBERON:0009663,7.07e-09,7;UBERON:0001897,8.19e-09,2;UBERON:0010225,8.19e-09,2;UBERON:0005162,9.57e-09,2;UBERON:0000122,9.57e-09,2;UBERON:0003076,9.57e-09,15;UBERON:0003057,9.57e-09,15;UBERON:000411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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5730 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9592 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-58bp_to_ENST00000444903_5end | |||
|coexpression_cluster_id=C485 | |||
|description=CAGE_peak_11_at_PTGDS_5end | |||
|id=chr9:139874630..139874648,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002575;2.43e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,2.39e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.03e-12;3!UBERON:0003057;1.03e-12;3!UBERON:0006601;1.09e-10;82!UBERON:0007297;2.80e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.10e-74!115;UBERON:0001049!3.03e-44!57;UBERON:0005068!3.03e-44!57;UBERON:0006241!3.03e-44!57;UBERON:0007135!3.03e-44!57;UBERON:0002616!6.29e-43!59;UBERON:0001017!1.25e-38!82;UBERON:0005743!6.85e-38!86;UBERON:0000955!7.24e-38!69;UBERON:0006238!7.24e-38!69;UBERON:0002780!1.36e-35!41;UBERON:0001890!1.36e-35!41;UBERON:0006240!1.36e-35!41;UBERON:0003080!1.76e-34!42;UBERON:0000073!1.94e-34!94;UBERON:0001016!1.94e-34!94;UBERON:0003075!8.28e-34!86;UBERON:0007284!8.28e-34!86;UBERON:0002346!1.46e-31!90;UBERON:0002020!3.87e-31!34;UBERON:0003528!3.87e-31!34;UBERON:0001893!8.38e-31!34;UBERON:0002791!7.65e-30!33;UBERON:0001869!4.04e-28!32;UBERON:0002619!1.70e-23!22;UBERON:0003056!3.21e-23!61;UBERON:0001950!6.73e-21!20;UBERON:0000033!1.84e-20!123;UBERON:0000956!5.27e-20!25;UBERON:0000203!5.27e-20!25;UBERON:0000153!1.13e-19!129;UBERON:0007811!1.13e-19!129;UBERON:0004121!6.03e-19!169;UBERON:0000924!4.37e-18!173;UBERON:0006601!4.37e-18!173;UBERON:0002420!3.47e-13!9;UBERON:0007245!3.47e-13!9;UBERON:0010009!3.47e-13!9;UBERON:0010011!3.47e-13!9;UBERON:0000454!3.47e-13!9;UBERON:0002308!4.66e-13!9;UBERON:0000125!4.66e-13!9;UBERON:0000025!2.05e-12!194;UBERON:0000477!3.86e-12!286;UBERON:0000062!1.81e-11!511;UBERON:0004111!6.64e-11!241;UBERON:0003076!1.07e-10!15;UBERON:0003057!1.07e-10!15;UBERON:0000064!1.18e-10!219;UBERON:0009663!1.82e-10!7;UBERON:0001871!9.41e-09!7;UBERON:0002298!1.36e-08!8;UBERON:0000200!3.44e-08!6;UBERON:0004732!3.60e-08!13;UBERON:0000349!5.89e-08!5;UBERON:0000475!7.71e-08!365;UBERON:0000483!1.02e-07!309;UBERON:0000119!1.78e-07!312;UBERON:0001872!3.41e-07!5;UBERON:0004733!6.91e-07!12;UBERON:0002028!6.91e-07!12;UBERON:0007277!6.91e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.64e-18;114!UBERON:0002780;1.91e-16;41!UBERON:0001890;1.91e-16;41!UBERON:0000073;1.03e-14;53!UBERON:0002616;1.03e-14;53!UBERON:0001894;7.35e-14;7!UBERON:0002240;1.03e-12;3!UBERON:0005174;1.03e-12;3!UBERON:0001137;1.03e-12;3!UBERON:0001017;1.43e-12;75!UBERON:0001016;4.99e-12;83!UBERON:0000955;2.94e-11;68!UBERON:0001893;5.97e-11;34!UBERON:0002791;9.97e-11;32!UBERON:0003528;1.40e-10;34!UBERON:0002020;1.40e-10;34!UBERON:0002420;2.44e-10;9!UBERON:0000125;2.44e-10;9!UBERON:0007245;2.44e-10;9!UBERON:0002308;2.44e-10;9!UBERON:0010009;2.44e-10;9!UBERON:0010011;2.44e-10;9!UBERON:0000454;2.44e-10;9!UBERON:0001869;1.96e-09;32!UBERON:0002784;4.10e-09;4!UBERON:0002360;7.41e-09;2!UBERON:0005162;7.41e-09;2!UBERON:0000122;7.41e-09;2!UBERON:0000094;7.41e-09;2!UBERON:0010743;7.41e-09;2!UBERON:0009663;8.88e-09;7!UBERON:0001897;9.74e-09;2!UBERON:0010225;9.74e-09;2!UBERON:0001954;3.24e-08;2!UBERON:0001875;3.24e-08;2!UBERON:0003022;3.24e-08;2!UBERON:0002421;3.24e-08;2!UBERON:0006514;3.24e-08;2!UBERON:0002600;3.24e-08;2!UBERON:0000349;3.11e-07;5!UBERON:0002619;3.66e-07;22 | |||
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|short_description=p11@PTGDS | |||
}} |
Revision as of 08:17, 14 September 2013
Short description: | p11@PTGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_PTGDS_5end |
Coexpression cluster: | C485_Pericytes_retina_cerebral_Dendritic_testis_corpus_spinal |
Association with transcript: | -58bp_to_ENST00000444903_5end |
EntrezGene: | PTGDS |
HGNC: | 9592 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.39e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.