FFCP PHASE1:Hg19::chr12:103353138..103353168,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C740 | |||
|description=CAGE_peak_at_chr12:103353138..103353168,+ | |||
|id=chr12:103353138..103353168,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.61e-09;1!CL:0000164;1.61e-09;1!CL:0000502;1.61e-09;1!CL:0000172;1.61e-09;1!CL:0000173;1.61e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.26e-09,1;CL:0000164,2.26e-09,1;CL:0000502,2.26e-09,1;CL:0000172,2.26e-09,1;CL:0000173,2.26e-09,1;CL:0002351,2.26e-09,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.61e-09;1!UBERON:0005425;1.61e-09;1 | |||
|ontology_enrichment_disease=DOID:169!6.35e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.61e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.26e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.95e-63!57;UBERON:0005068!4.95e-63!57;UBERON:0006241!4.95e-63!57;UBERON:0007135!4.95e-63!57;UBERON:0002780!1.38e-55!41;UBERON:0001890!1.38e-55!41;UBERON:0006240!1.38e-55!41;UBERON:0003080!4.35e-54!42;UBERON:0002616!1.75e-50!59;UBERON:0000073!8.01e-47!94;UBERON:0001016!8.01e-47!94;UBERON:0001893!1.62e-46!34;UBERON:0001017!5.73e-45!82;UBERON:0002791!2.27e-44!33;UBERON:0000955!1.03e-43!69;UBERON:0006238!1.03e-43!69;UBERON:0002020!3.84e-43!34;UBERON:0003528!3.84e-43!34;UBERON:0005743!2.04e-42!86;UBERON:0001869!2.44e-42!32;UBERON:0003075!1.02e-40!86;UBERON:0007284!1.02e-40!86;UBERON:0002346!1.90e-38!90;UBERON:0003056!2.29e-37!61;UBERON:0002619!1.51e-35!22;UBERON:0001950!6.89e-35!20;UBERON:0000956!7.19e-31!25;UBERON:0000203!7.19e-31!25;UBERON:0007023!2.44e-29!115;UBERON:0000153!1.11e-24!129;UBERON:0007811!1.11e-24!129;UBERON:0004121!9.08e-24!169;UBERON:0000033!2.32e-23!123;UBERON:0000924!5.92e-23!173;UBERON:0006601!5.92e-23!173;UBERON:0002021!5.99e-15!5;UBERON:0000025!2.78e-14!194;UBERON:0001872!4.41e-14!5;UBERON:0002308!1.35e-13!9;UBERON:0000125!1.35e-13!9;UBERON:0009663!4.28e-13!7;UBERON:0000200!3.25e-11!6;UBERON:0003076!1.22e-10!15;UBERON:0003057!1.22e-10!15;UBERON:0001894!3.02e-10!7;UBERON:0006222!3.02e-10!7;UBERON:0002420!4.89e-10!9;UBERON:0007245!4.89e-10!9;UBERON:0010009!4.89e-10!9;UBERON:0010011!4.89e-10!9;UBERON:0000454!4.89e-10!9;UBERON:0004111!1.57e-09!241;UBERON:0002240!2.12e-09!3;UBERON:0002771!2.74e-09!3;UBERON:0001896!8.54e-09!3;UBERON:0005290!8.54e-09!3;UBERON:0010096!8.54e-09!3;UBERON:0001871!1.09e-08!7;UBERON:0002298!2.97e-08!8;UBERON:0000477!3.08e-08!286;UBERON:0000483!4.38e-08!309;UBERON:0000119!6.62e-08!312;UBERON:0000064!9.19e-08!219;UBERON:0004732!4.16e-07!13;UBERON:0001897!5.54e-07!2;UBERON:0000007!9.32e-07!2;UBERON:0001875!9.86e-07!2;UBERON:0006514!9.86e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;9.77e-19;20!UBERON:0002619;4.80e-17;22!UBERON:0002021;9.52e-16;5!UBERON:0000956;5.39e-15;25!UBERON:0000203;5.39e-15;25!UBERON:0001869;7.70e-15;32!UBERON:0002791;4.46e-14;32!UBERON:0001893;1.26e-12;34!UBERON:0003528;5.54e-12;34!UBERON:0002020;5.54e-12;34!UBERON:0002780;5.50e-11;41!UBERON:0001890;5.50e-11;41!UBERON:0000941;1.61e-09;1!UBERON:0001389;1.61e-09;1!UBERON:0000026;1.61e-09;1!UBERON:0008784;1.61e-09;1!UBERON:0001785;1.61e-09;1!UBERON:0002464;1.61e-09;1!UBERON:0004904;1.61e-09;1!UBERON:0006058;1.61e-09;1!UBERON:0003663;1.61e-09;1!UBERON:0004256;1.61e-09;1!UBERON:0001021;1.61e-09;1!UBERON:0004708;1.61e-09;1!UBERON:0002101;1.61e-09;1!UBERON:0004709;1.61e-09;1!UBERON:0002529;1.61e-09;1!UBERON:0010538;1.61e-09;1!UBERON:0003661;1.61e-09;1!UBERON:0010890;1.61e-09;1!UBERON:0002471;1.61e-09;1!UBERON:0001383;1.61e-09;1!UBERON:0010758;1.61e-09;1!UBERON:0010707;1.61e-09;1!UBERON:0000978;1.61e-09;1!UBERON:0002103;1.61e-09;1!UBERON:0001665;1.61e-09;1!UBERON:0003823;1.61e-09;1!UBERON:0000154;1.61e-09;1!UBERON:0010709;1.61e-09;1!UBERON:0000073;1.22e-07;53!UBERON:0002616;1.22e-07;53!UBERON:0001872;1.36e-07;5!UBERON:0001017;2.08e-07;75!UBERON:0001016;6.50e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,8.09e-19,20;UBERON:0002619,4.04e-17,22;UBERON:0001049,6.60e-16,56;UBERON:0005068,6.60e-16,56;UBERON:0006241,6.60e-16,56;UBERON:0007135,6.60e-16,56;UBERON:0002021,7.41e-16,5;UBERON:0002791,3.85e-15,32;UBERON:0001869,3.85e-15,32;UBERON:0000956,4.63e-15,25;UBERON:0000203,4.63e-15,25;UBERON:0002780,9.10e-15,41;UBERON:0001890,9.10e-15,41;UBERON:0003080,9.10e-15,41;UBERON:0006240,9.10e-15,41;UBERON:0003528,3.23e-14,34;UBERON:0002020,3.23e-14,34;UBERON:0001893,3.23e-14,34;UBERON:0000073,6.89e-14,53;UBERON:0002616,6.89e-14,53;UBERON:0001016,4.68e-13,89;UBERON:0003075,2.02e-12,82;UBERON:0007284,2.02e-12,82;UBERON:0003056,7.40e-12,61;UBERON:0002346,9.32e-12,86;UBERON:0001017,2.32e-10,81;UBERON:0000955,2.34e-10,68;UBERON:0006238,2.34e-10,68;UBERON:0000941,1.36e-09,1;UBERON:0001785,1.36e-09,1;UBERON:0002464,1.36e-09,1;UBERON:0004904,1.36e-09,1;UBERON:0001021,1.36e-09,1;UBERON:0003902,1.36e-09,1;UBERON:0005425,1.36e-09,1;UBERON:0005418,1.48e-09,1;UBERON:0001389,1.48e-09,1;UBERON:0000026,1.48e-09,1;UBERON:0008784,1.48e-09,1;UBERON:0006058,1.48e-09,1;UBERON:0003663,1.48e-09,1;UBERON:0004256,1.48e-09,1;UBERON:0004708,1.48e-09,1;UBERON:0002101,1.48e-09,1;UBERON:0004709,1.48e-09,1;UBERON:0002529,1.48e-09,1;UBERON:0010538,1.48e-09,1;UBERON:0003661,1.48e-09,1;UBERON:0010890,1.48e-09,1;UBERON:0002471,1.48e-09,1;UBERON:0001383,1.48e-09,1;UBERON:0004357,1.48e-09,1;UBERON:0004347,1.48e-09,1;UBERON:0005420,1.48e-09,1;UBERON:0005732,1.48e-09,1;UBERON:0010758,1.48e-09,1;UBERON:0010707,1.48e-09,1;UBERON:0000978,1.48e-09,1;UBERON:0002103,1.48e-09,1;UBERON:0001665,1.48e-09,1;UBERON:0003823,1.48e-09,1;UBERON:0000154,1.48e-09,1;UBERON:0010709,1.48e-09,1;UBERON:0005733,1.48e-09,1;UBERON:0005730,1.48e-09,1;UBERON:0010371,2.15e-09,104;UBERON:0001872,1.15e-07,5;UBERON:0010314,5.44e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,1.06730766284929,1.25937250101887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.617819694732514,1.04421949505455,0.067401132980677,0,0.468528891450678,0,0,0,0,0,2.14250933141343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,12.1832448481995,0,0,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.817220436669454,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22026264901963,0.250381861413,2.29363678276028,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0.383683113910955,1.94084660514027,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0.0642292250964595,2.8339315265117,0.638535436228605,1.43581454968528,3.02486035466062,0.207471757392654,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,1.56215619722769,0.620060389503552,0.19024743058172,2.7348740450911,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0,0.115233987555779,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0,0,0,4.67878926924211,0,0,0,0,7.54814217833368,0,0,11.2876151126765,0,1.17838273550813,0.588925401344836,0.594092800654172,2.113278637917,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,7.85431242612679,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,1.65833887891756,0.620597975171371,0,0.23806443146374,0,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:103353138..103353168,+ | |||
}} |
Revision as of 15:33, 11 January 2014
Short description: | p@chr12:103353138..103353168, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:103353138..103353168, + |
Coexpression cluster: | C740_gastrointestinal_smallcell_small_nonsmall_neuroblastoma_temporal_somatostatinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.26e-09 | 1 |
enteroendocrine cell | 2.26e-09 | 1 |
type D enteroendocrine cell | 2.26e-09 | 1 |
somatostatin secreting cell | 2.26e-09 | 1 |
pancreatic D cell | 2.26e-09 | 1 |
progenitor cell of endocrine pancreas | 2.26e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.26e-09 | 1 |