FFCP PHASE1:Hg19::chr17:41177283..41177295,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8153 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18315 | |||
|TSSclassifier=strong | |||
|UniProt=P52198,F5H2U5 | |||
|association_with_transcript=25bp_to_ENST00000225973,ENST00000544533,NM_005440,uc002icn.2_5end | |||
|description=CAGE_peak_2_at_RND2_5end | |||
|id=chr17:41177283..41177295,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.70e-12!5;CL:0000039!3.82e-07!7;CL:0000586!3.82e-07!7;CL:0000148!4.89e-07!10;CL:0000541!4.89e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.50e-45;5!CL:0002321;3.57e-15;15!CL:0002553;2.87e-10;1!CL:0000148;7.23e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.28e-46,5;CL:0002553,2.28e-10,1;CL:0000148,6.32e-09,10;CL:0000541,6.32e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0006222;2.87e-10;1 | |||
|ontology_enrichment_disease=DOID:3095!3.34e-07!22;DOID:2994!3.34e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.70e-41!82;UBERON:0001049!2.18e-40!57;UBERON:0005068!2.18e-40!57;UBERON:0006241!2.18e-40!57;UBERON:0007135!2.18e-40!57;UBERON:0005743!1.20e-38!86;UBERON:0000073!1.28e-35!94;UBERON:0001016!1.28e-35!94;UBERON:0002616!1.07e-31!59;UBERON:0003075!3.31e-31!86;UBERON:0007284!3.31e-31!86;UBERON:0002346!7.71e-31!90;UBERON:0000955!8.77e-31!69;UBERON:0006238!8.77e-31!69;UBERON:0002020!6.27e-28!34;UBERON:0003528!6.27e-28!34;UBERON:0001893!3.32e-27!34;UBERON:0002780!4.34e-26!41;UBERON:0001890!4.34e-26!41;UBERON:0006240!4.34e-26!41;UBERON:0002791!6.16e-26!33;UBERON:0003080!2.67e-25!42;UBERON:0007023!1.69e-24!115;UBERON:0001869!7.64e-24!32;UBERON:0003056!4.36e-18!61;UBERON:0000924!5.19e-18!173;UBERON:0006601!5.19e-18!173;UBERON:0004121!7.63e-18!169;UBERON:0003076!1.13e-16!15;UBERON:0003057!1.13e-16!15;UBERON:0002619!5.59e-16!22;UBERON:0000956!9.40e-16!25;UBERON:0000203!9.40e-16!25;UBERON:0001950!2.95e-15!20;UBERON:0002308!3.64e-15!9;UBERON:0000125!3.64e-15!9;UBERON:0000033!9.48e-15!123;UBERON:0000153!1.64e-14!129;UBERON:0007811!1.64e-14!129;UBERON:0002298!2.97e-14!8;UBERON:0000025!1.09e-11!194;UBERON:0004733!1.36e-11!12;UBERON:0002028!1.36e-11!12;UBERON:0007277!1.36e-11!12;UBERON:0002420!2.32e-11!9;UBERON:0007245!2.32e-11!9;UBERON:0010009!2.32e-11!9;UBERON:0010011!2.32e-11!9;UBERON:0000454!2.32e-11!9;UBERON:0009663!4.20e-11!7;UBERON:0004732!1.46e-10!13;UBERON:0000473!3.68e-09!8;UBERON:0001896!4.11e-08!3;UBERON:0005290!4.11e-08!3;UBERON:0010096!4.11e-08!3;UBERON:0006331!5.03e-08!3;UBERON:0000988!6.57e-08!3;UBERON:0000200!1.03e-07!6;UBERON:0004111!1.10e-07!241;UBERON:0002240!3.32e-07!3;UBERON:0002021!5.90e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.16e-54;6!UBERON:0004733;1.24e-36;12!UBERON:0002028;1.24e-36;12!UBERON:0004732;9.06e-34;13!UBERON:0001896;1.35e-28;3!UBERON:0005290;1.35e-28;3!UBERON:0000988;6.83e-28;3!UBERON:0002148;2.06e-19;2!UBERON:0006331;2.06e-19;2!UBERON:0009662;2.06e-19;2!UBERON:0000125;1.64e-16;9!UBERON:0002308;1.64e-16;9!UBERON:0002680;2.40e-16;9!UBERON:0001895;2.40e-16;9!UBERON:0002038;1.19e-10;1!UBERON:0009661;1.19e-10;1!UBERON:0002950;1.19e-10;1!UBERON:0001891;1.19e-10;1!UBERON:0000073;1.75e-10;53!UBERON:0002616;1.75e-10;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.76e-54,6;UBERON:0003076,6.45e-38,15;UBERON:0003057,6.45e-38,15;UBERON:0004733,1.81e-36,12;UBERON:0002028,1.81e-36,12;UBERON:0007277,1.81e-36,12;UBERON:0004732,1.28e-33,13;UBERON:0001896,1.42e-28,3;UBERON:0005290,1.42e-28,3;UBERON:0010096,1.42e-28,3;UBERON:0000988,9.87e-28,3;UBERON:0002148,3.13e-19,2;UBERON:0006331,3.13e-19,2;UBERON:0009662,3.13e-19,2;UBERON:0001049,1.25e-17,56;UBERON:0005068,1.25e-17,56;UBERON:0006241,1.25e-17,56;UBERON:0007135,1.25e-17,56;UBERON:0000125,1.51e-16,9;UBERON:0002308,1.51e-16,9;UBERON:0002680,3.11e-16,9;UBERON:0001895,3.11e-16,9;UBERON:0010092,3.11e-16,9;UBERON:0000073,2.28e-15,53;UBERON:0002616,2.28e-15,53;UBERON:0001017,7.74e-14,81;UBERON:0001016,2.71e-12,89;UBERON:0003075,1.44e-11,82;UBERON:0007284,1.44e-11,82;UBERON:0000955,1.63e-11,68;UBERON:0006238,1.63e-11,68;UBERON:0002346,5.90e-11,86;UBERON:0002038,8.95e-11,1;UBERON:0009661,8.95e-11,1;UBERON:0002950,8.95e-11,1;UBERON:0001891,8.95e-11,1;UBERON:0009616,8.95e-11,1;UBERON:0010286,8.95e-11,1;UBERON:0007023,1.69e-09,114;UBERON:0010371,8.86e-09,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,2.43947412259191,1.98794652482228,2.5562667431294,1.96956004529204,3.28017106138317,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.19924798825107,0,0,0.511343412510774,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,1.21637185924347,0.886642856860642,0.438770794307945,0,0,0,0,0,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,1.40558667435203,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0.253243183823515,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,1.9166753044879,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.817220436669454,0.964518890790115,0.412618309791701,1.24632101408756,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,5.02483886622222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,3.44045517414043,2.77322628842131,2.11127770000704,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0.123935764259002,0,0,0,1.60114149657094,0,0,0.256916900385838,0,0.319267718114302,0.41023272848151,0.504143392443436,0.345786262321089,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0,0,1.42736439251347,0.394636641377094,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0.329821550236287,0,0,0,0,0,0,0.392616934229891,0.297046400327086,2.5359343655004,0,0,0,0,0,0,0,0,0,2.86679166302903,0,0.135982980381829,0,0,0,0,0,0.630832124175395,0.437062287854782,0.126698501011437,0.509944148709909,0.26721740526556,0.18378979906969,0.50141507858475,1.51557396436479,1.07185652062471,0,0.724030971033267,0.213233981900981,0,0,0,0,0.381882949668989,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p2@RND2 | |||
}} |
Revision as of 15:32, 20 January 2014
Short description: | p2@RND2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RND2_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000225973, ENST00000544533, NM_005440, uc002icn.2_5end |
EntrezGene: | RND2 |
HGNC: | 18315 |
UniProt: | P52198F5H2U5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.28e-46 | 5 |
lung fibroblast | 2.28e-10 | 1 |
melanocyte | 6.32e-09 | 10 |
melanoblast | 6.32e-09 | 10 |