FFCP PHASE1:Hg19::chr17:8213539..8213566,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22899 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15590 | |||
|TSSclassifier=strong | |||
|UniProt=O94989 | |||
|association_with_transcript=0bp_to_ENST00000361926,NM_173728_5end | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_ARHGEF15_5end | |||
|id=chr17:8213539..8213566,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.83e-29!24;CL:0000115!1.43e-26!35;CL:0000071!1.61e-22!18;CL:0002546!1.61e-22!18;CL:0002078!5.65e-20!44;CL:1000413!3.07e-12!9;CL:0000213!5.10e-12!57;CL:0000215!5.10e-12!57;CL:0002544!8.49e-09!6;CL:0002543!1.35e-08!6;CL:0005020!8.21e-08!6;CL:0002138!8.21e-08!6;CL:0005022!8.21e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.11e-35;24!CL:0000115;4.25e-29;36!CL:0000071;2.62e-27;18!CL:0002078;2.91e-16;45!CL:1000413;1.18e-14;9!CL:0000213;2.51e-11;58!CL:0000215;2.51e-11;58!CL:0002544;1.91e-10;6!CL:0002543;3.21e-10;6!CL:0002138;3.03e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.41e-35,24;CL:0000115,2.24e-34,36;CL:0000071,2.70e-27,18;CL:0002546,2.70e-27,18;CL:0002078,3.03e-25,45;CL:0000213,3.41e-17,58;CL:0000215,3.41e-17,58;CL:1000413,1.16e-14,9;CL:0002544,1.93e-10,6;CL:0002543,3.40e-10,6;CL:0005020,3.10e-09,6;CL:0002138,3.10e-09,6;CL:0005022,3.10e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.62e-27;18!CL:0005022;3.03e-09;6!UBERON:0004872;2.69e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.19e-60!115;UBERON:0004111!3.22e-29!241;UBERON:0000025!2.44e-26!194;UBERON:0000477!2.14e-25!286;UBERON:0001986!1.61e-22!18;UBERON:0004638!1.61e-22!18;UBERON:0004852!1.61e-22!18;UBERON:0001049!2.82e-20!57;UBERON:0005068!2.82e-20!57;UBERON:0006241!2.82e-20!57;UBERON:0007135!2.82e-20!57;UBERON:0000487!4.20e-17!22;UBERON:0003080!2.98e-16!42;UBERON:0003075!4.86e-16!86;UBERON:0007284!4.86e-16!86;UBERON:0002616!5.85e-16!59;UBERON:0002780!2.23e-15!41;UBERON:0001890!2.23e-15!41;UBERON:0006240!2.23e-15!41;UBERON:0002346!1.13e-14!90;UBERON:0001017!1.44e-14!82;UBERON:0005743!3.08e-14!86;UBERON:0006914!3.26e-14!25;UBERON:0000955!5.72e-14!69;UBERON:0006238!5.72e-14!69;UBERON:0000483!7.00e-14!309;UBERON:0001893!7.64e-14!34;UBERON:0002020!9.65e-14!34;UBERON:0003528!9.65e-14!34;UBERON:0000119!1.84e-13!312;UBERON:0002791!2.82e-13!33;UBERON:0001869!9.12e-13!32;UBERON:0000055!1.01e-12!69;UBERON:0004872!2.29e-12!84;UBERON:0003915!3.07e-12!9;UBERON:0004700!3.07e-12!9;UBERON:0001917!3.07e-12!9;UBERON:0002619!4.09e-12!22;UBERON:0000073!1.28e-11!94;UBERON:0001016!1.28e-11!94;UBERON:0000468!1.73e-11!659;UBERON:0000467!5.22e-11!625;UBERON:0000480!6.45e-11!626;UBERON:0001950!1.22e-10!20;UBERON:0001009!1.52e-10!113;UBERON:0003914!2.35e-10!118;UBERON:0002049!2.88e-10!79;UBERON:0007798!2.88e-10!79;UBERON:0000956!4.68e-10!25;UBERON:0000203!4.68e-10!25;UBERON:0003056!6.68e-10!61;UBERON:0001981!9.45e-10!60;UBERON:0007500!9.45e-10!60;UBERON:0004537!9.45e-10!60;UBERON:0006965!9.45e-10!60;UBERON:0004535!4.50e-09!110;UBERON:0003103!4.68e-09!69;UBERON:0000153!8.10e-09!129;UBERON:0007811!8.10e-09!129;UBERON:0000922!1.53e-08!612;UBERON:0000033!1.11e-07!123;UBERON:0002050!1.41e-07!605;UBERON:0005423!1.41e-07!605;UBERON:0000923!2.99e-07!604;UBERON:0005291!2.99e-07!604;UBERON:0006598!2.99e-07!604;UBERON:0002532!2.99e-07!604;UBERON:0000481!3.47e-07!347;UBERON:0001638!5.92e-07!9;UBERON:0003920!5.92e-07!9;UBERON:0004582!5.92e-07!9;UBERON:0002298!6.70e-07!8;UBERON:0001871!8.02e-07!7;UBERON:0002465!8.38e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.62e-27;18!UBERON:0001986;2.62e-27;18!UBERON:0004852;2.62e-27;18!UBERON:0000487;3.90e-21;22!UBERON:0006914;7.98e-18;25!UBERON:0003915;1.18e-14;9!UBERON:0004700;1.18e-14;9!UBERON:0001917;1.18e-14;9!UBERON:0007023;4.97e-12;114!UBERON:0002619;5.71e-12;22!UBERON:0000490;3.62e-11;33!UBERON:0001950;3.07e-10;20!UBERON:0000956;4.61e-10;25!UBERON:0000203;4.61e-10;25!UBERON:0001869;6.40e-10;32!UBERON:0001893;6.45e-10;34!UBERON:0002780;1.71e-09;41!UBERON:0001890;1.71e-09;41!UBERON:0002791;4.87e-09;32!UBERON:0003528;1.21e-08;34!UBERON:0002020;1.21e-08;34!UBERON:0001638;1.99e-08;9!UBERON:0003920;1.99e-08;9!UBERON:0004582;1.99e-08;9!UBERON:0000073;8.53e-08;53!UBERON:0002616;8.53e-08;53!UBERON:0000055;1.66e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.62e-49,114;UBERON:0004638,2.70e-27,18;UBERON:0001986,2.70e-27,18;UBERON:0004852,2.70e-27,18;UBERON:0004111,1.96e-24,240;UBERON:0000487,4.00e-21,22;UBERON:0000025,1.02e-19,192;UBERON:0006914,8.15e-18,25;UBERON:0003915,1.16e-14,9;UBERON:0004700,1.16e-14,9;UBERON:0001917,1.16e-14,9;UBERON:0000055,3.73e-14,68;UBERON:0001049,9.79e-13,56;UBERON:0005068,9.79e-13,56;UBERON:0006241,9.79e-13,56;UBERON:0007135,9.79e-13,56;UBERON:0004872,4.96e-12,83;UBERON:0002619,5.44e-12,22;UBERON:0000073,7.33e-12,53;UBERON:0002616,7.33e-12,53;UBERON:0002780,1.86e-11,41;UBERON:0001890,1.86e-11,41;UBERON:0003080,1.86e-11,41;UBERON:0006240,1.86e-11,41;UBERON:0001893,2.29e-11,34;UBERON:0001869,3.16e-11,32;UBERON:0002049,4.42e-11,78;UBERON:0007798,4.42e-11,78;UBERON:0001009,1.20e-10,112;UBERON:0007500,1.94e-10,59;UBERON:0001981,1.94e-10,59;UBERON:0004537,1.94e-10,59;UBERON:0006965,1.94e-10,59;UBERON:0000483,2.21e-10,306;UBERON:0001950,2.86e-10,20;UBERON:0003528,3.08e-10,34;UBERON:0002020,3.08e-10,34;UBERON:0002791,4.11e-10,32;UBERON:0000956,4.43e-10,25;UBERON:0000203,4.43e-10,25;UBERON:0000119,4.46e-10,309;UBERON:0003075,1.82e-09,82;UBERON:0007284,1.82e-09,82;UBERON:0003914,1.85e-09,117;UBERON:0004535,5.49e-09,109;UBERON:0010314,1.07e-08,132;UBERON:0002346,1.27e-08,86;UBERON:0001638,2.07e-08,9;UBERON:0003920,2.07e-08,9;UBERON:0004582,2.07e-08,9;UBERON:0001017,3.02e-08,81;UBERON:0000955,4.39e-08,68;UBERON:0006238,4.39e-08,68;UBERON:0003103,6.30e-08,68;UBERON:0011216,1.74e-07,223;UBERON:0003887,3.81e-07,12;UBERON:0002050,3.83e-07,564;UBERON:0000922,4.57e-07,592;UBERON:0000923,5.37e-07,560;UBERON:0010316,5.37e-07,560;UBERON:0005291,5.37e-07,560;UBERON:0006598,5.37e-07,560;UBERON:0010317,5.37e-07,560;UBERON:0002532,5.37e-07,560;UBERON:0005423,6.17e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,1.15076305659177,0,0,0,0,0,0,0,0.087834785693126,11.1332214173056,0,0,1.29818957461873,1.91542711029194,1.72845348674525,0,0,0,47.9017401753759,26.6672724482899,61.7910092861518,29.3960129800485,28.5259616622736,15.1314923067037,29.8862802147639,27.6505932311182,25.9709371761298,55.2289011061706,28.6008815147494,12.1643536914962,16.1080957981792,26.1040787045567,29.1651101237433,32.0586024539846,22.452937262617,28.3780930817972,29.1301611185178,25.6301728083395,26.5642528699091,0,0,0,0,0,0,0,0.354668382198357,0,4.2699598291882,0,0.311211035399766,0.67355336034844,1.30769522490767,0,0,0,0,3.99330275081114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.074860913605,9.81692416624121,0.4115740113314,0,0,0,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,7.21832238805369,3.24089858803628,8.56143685055692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.432359860250884,0,0,0,0,3.4214489204541,0,0,0,0,0,0,0,0,1.690605505112,0,0,0,0,0,0.142977993658148,0,0,2.60588947434988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60279707715243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5706798584331,18.0299327593107,11.8753753856177,61.6909010761157,0,0,0,0.831076008928724,0,0,0,0,0,0,8.03719890852234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.92947049429925,0,0,0,0,0,0,0,0,0,0,0,0,8.09636686680301,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.2778627451629,0,0.111443384277478,0,0,0,0,1.9882952955326,1.68803299692615,0,0,0,5.97743964753209,3.59169090190492,0,0,0,0,0,0,0,8.08875926222856,0,0,0.969332746095218,1.20598527610407,0,0,0,13.0499923578263,0,0,0,0,0,0,0,1.80894657938112,0,0.995213339381022,0.591095237907095,0.219385397153973,0,0,9.92658334698982,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,5.39591143470369,1.83309043480088,0,0,0,1.68502832451693,17.6567082405734,1.63985112007737,0,0,0,2.76209081994573,7.25944296291983,1.83643656978294,14.0906072571528,0,0,0,0,0,0,0,0,0.173559738335131,0,0,5.41652671550293,0,0,0,0,3.87956065953678,0,4.51961481561065,0,0,2.59574263419103,0,0,6.40358984218058,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0.600420288709789,2.0535806833799,0,0,0,17.0362264776075,19.7077964650048,31.5864130813798,5.39133301347276,6.43839072204856,14.7293161911636,16.191216869301,0,0,0,0,0,0,0,2.38568906942791,5.44813624446302,0,0,0,0.2249738915515,0,2.79447960626913,0,7.40773648612463,11.9596460947796,0,0,0,9.29103924285377,7.94510364438518,0,0,0,0,0,0,0,0,2.78449243988357,1.32506888912221,0.775697738169303,1.05786081394152,0,0,6.51403216662938,41.6591408514115,14.4983669371518,0.992332043623902,0,0,0,6.52821364043369,17.7989824756117,3.67614692116154,7.2131978756157,0,0.886068179966986,0.488105059607853,2.1282458220105,1.72022758707021,1.66393577305278,4.28465180295546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.376481328569,0,2.39450788585727,1.23069818544453,0,2.62797559364028,0.968853873791107,0,0,0,0,0,0,0,0,6.39287790968687,0,3.12605604493237,0,0,0,1.62090203084147,0,3.10030194751776,1.71222687523548,1.09394961803644,2.74128883428591,13.8939129949002,0,0,0.535701835878287,2.01770233331294,0,1.82129753081038,9.75726071789027,0,0,3.05863798395743,1.51277379194553,0,0,9.26218495636065,0.314231179832004,0,2.73947616152849,0,0,10.8644347148518,0,0,0,0,0,0,0,2.15113679410139,0,0,5.50403165248208,0,0,0,0,0,0,7.76914604625474,13.6541533118809,8.11870101936739,10.6856418473011,0,0,0,0,0,0.301925687133347,3.31848879864162,2.40415516554353,0,3.43207650455468,0,0.392616934229891,1.78227840196252,2.5359343655004,0,5.54505116081136,11.4090461713232,0,0,0,0,1.46067277649303,2.2936464170227,0.716697915757256,0,2.03974470572744,2.61810414204226,5.81929524566941,0,0,0,0,0,0.886889507080059,0.305966489225945,0.26721740526556,0.18378979906969,0,3.41004141982077,0.535928260312357,0,0.620597975171371,4.90438158372256,6.18967521805725,0.581300188524055,2.17261500035503,0,4.32800676291521,5.65928129083014,4.57205170583619,6.50243272062034,3.09819443867103,10.18455316576,3.65926392200615,0,0,0,0,4.69281884806909,18.8251824041614,4.88275413978886,33.9535954834611,6.44076139491284,0 | |||
|short_description=p1@ARHGEF15 | |||
}} |
Revision as of 13:48, 20 January 2014
Short description: | p1@ARHGEF15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGEF15_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000361926, NM_173728_5end |
EntrezGene: | ARHGEF15 |
HGNC: | 15590 |
UniProt: | O94989 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.41e-35 | 24 |
endothelial cell | 2.24e-34 | 36 |
blood vessel endothelial cell | 2.70e-27 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.70e-27 | 18 |
meso-epithelial cell | 3.03e-25 | 45 |
lining cell | 3.41e-17 | 58 |
barrier cell | 3.41e-17 | 58 |
endothelial cell of artery | 1.16e-14 | 9 |
aortic endothelial cell | 1.93e-10 | 6 |
vein endothelial cell | 3.40e-10 | 6 |
lymphangioblast | 3.10e-09 | 6 |
endothelial cell of lymphatic vessel | 3.10e-09 | 6 |
vascular lymphangioblast | 3.10e-09 | 6 |