FFCP PHASE1:Hg19::chr4:155665145..155665158,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6685 | |||
|TSSclassifier=strong | |||
|UniProt=O95237 | |||
|association_with_transcript=0bp_to_ENST00000510733,uc003iom.1_5end | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_1_at_LRAT_5end | |||
|id=chr4:155665145..155665158,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.97e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.23e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.24e-14,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.27e-08;10!UBERON:0005564;1.27e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.06e-27!57;UBERON:0005068!1.06e-27!57;UBERON:0006241!1.06e-27!57;UBERON:0007135!1.06e-27!57;UBERON:0007023!9.39e-25!115;UBERON:0005743!1.79e-24!86;UBERON:0001017!8.72e-23!82;UBERON:0002616!5.71e-22!59;UBERON:0000073!1.86e-21!94;UBERON:0001016!1.86e-21!94;UBERON:0003075!2.74e-21!86;UBERON:0007284!2.74e-21!86;UBERON:0002346!2.11e-20!90;UBERON:0002780!3.20e-20!41;UBERON:0001890!3.20e-20!41;UBERON:0006240!3.20e-20!41;UBERON:0003080!1.81e-19!42;UBERON:0004121!4.81e-19!169;UBERON:0000924!1.18e-18!173;UBERON:0006601!1.18e-18!173;UBERON:0000955!1.91e-18!69;UBERON:0006238!1.91e-18!69;UBERON:0003056!2.15e-17!61;UBERON:0002020!6.35e-17!34;UBERON:0003528!6.35e-17!34;UBERON:0001893!1.47e-16!34;UBERON:0002791!3.48e-16!33;UBERON:0001869!2.39e-15!32;UBERON:0000033!3.13e-14!123;UBERON:0000153!5.42e-14!129;UBERON:0007811!5.42e-14!129;UBERON:0000956!3.15e-10!25;UBERON:0000203!3.15e-10!25;UBERON:0000062!3.26e-10!511;UBERON:0003076!1.97e-09!15;UBERON:0003057!1.97e-09!15;UBERON:0000922!2.33e-09!612;UBERON:0004111!2.75e-09!241;UBERON:0002420!6.04e-09!9;UBERON:0007245!6.04e-09!9;UBERON:0010009!6.04e-09!9;UBERON:0010011!6.04e-09!9;UBERON:0000454!6.04e-09!9;UBERON:0002308!7.10e-09!9;UBERON:0000125!7.10e-09!9;UBERON:0000483!7.52e-09!309;UBERON:0000119!1.60e-08!312;UBERON:0002619!4.06e-08!22;UBERON:0000025!1.08e-07!194;UBERON:0000477!2.56e-07!286;UBERON:0009663!3.33e-07!7;UBERON:0004733!3.34e-07!12;UBERON:0002028!3.34e-07!12;UBERON:0007277!3.34e-07!12;UBERON:0000475!4.76e-07!365;UBERON:0000064!7.76e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;9.73e-12;9!UBERON:0002308;9.73e-12;9!UBERON:0000073;1.09e-10;53!UBERON:0002616;1.09e-10;53!UBERON:0002298;3.85e-10;6!UBERON:0002420;6.10e-09;9!UBERON:0007245;6.10e-09;9!UBERON:0010009;6.10e-09;9!UBERON:0010011;6.10e-09;9!UBERON:0000454;6.10e-09;9!UBERON:0001896;1.54e-08;3!UBERON:0005290;1.54e-08;3!UBERON:0009663;3.11e-08;7!UBERON:0000473;5.40e-08;8!UBERON:0000349;8.71e-08;5!UBERON:0003135;9.09e-08;11!UBERON:0002780;1.26e-07;41!UBERON:0001890;1.26e-07;41!UBERON:0003528;4.57e-07;34!UBERON:0002020;4.57e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.70e-14,56;UBERON:0005068,3.70e-14,56;UBERON:0006241,3.70e-14,56;UBERON:0007135,3.70e-14,56;UBERON:0007023,6.47e-14,114;UBERON:0001017,1.13e-13,81;UBERON:0000073,1.24e-13,53;UBERON:0002616,1.24e-13,53;UBERON:0001016,9.77e-13,89;UBERON:0010371,1.42e-12,104;UBERON:0000125,1.13e-11,9;UBERON:0002308,1.13e-11,9;UBERON:0000955,2.24e-10,68;UBERON:0006238,2.24e-10,68;UBERON:0002298,3.94e-10,6;UBERON:0003075,3.99e-10,82;UBERON:0007284,3.99e-10,82;UBERON:0002346,2.16e-09,86;UBERON:0002420,6.12e-09,9;UBERON:0007245,6.12e-09,9;UBERON:0010009,6.12e-09,9;UBERON:0010011,6.12e-09,9;UBERON:0000454,6.12e-09,9;UBERON:0002780,7.46e-09,41;UBERON:0001890,7.46e-09,41;UBERON:0003080,7.46e-09,41;UBERON:0006240,7.46e-09,41;UBERON:0001896,1.26e-08,3;UBERON:0005290,1.26e-08,3;UBERON:0010096,1.26e-08,3;UBERON:0004121,1.51e-08,171;UBERON:0000924,1.51e-08,171;UBERON:0006601,1.51e-08,171;UBERON:0011216,1.81e-08,223;UBERON:0003528,3.04e-08,34;UBERON:0002020,3.04e-08,34;UBERON:0009663,3.06e-08,7;UBERON:0000473,4.99e-08,8;UBERON:0000349,6.06e-08,5;UBERON:0003135,7.83e-08,11;UBERON:0003076,4.81e-07,15;UBERON:0003057,4.81e-07,15;UBERON:0001893,5.05e-07,34;UBERON:0003056,8.08e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,2.57612388417951,1.36874425072884,0.627713197974014,0,0,0,0,0,0,0,0,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.822335776043652,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.870627715885752,0,0,0.251248665256743,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,1.96468613246569,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.860413786167011,73.6721185022756,28.7589597257623,41.5974315472876,27.98848485415,53.4920203856332,3.6497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,5.31710916013264,0,0.122988438543114,0.171567810298526,2.63400684980701,2.24803506515239,0.603173834469785,0,0,0,0,0.811512834825538,0.117408694235822,0.144366447761074,0,0,0,0.858486162094873,0,0,0,0,0,0,13.9711295416443,4.35950907770943,8.43441894163465,0,0,0.414656231081544,0.288239906833923,0,0.063497894292169,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,25.0460289905638,0,0,0,0,0.231046011313244,0,1.46139224653261,0.633309773357254,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,2.05160100093111,0.328014645699706,0,2.7821073144885,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0,2.32662895967765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.921482106297696,0.994147647766298,2.39138007897872,0.333926115068718,0,0.63337622438398,0.19924798825107,1.38141957765574,0,0,0,0,0.449341755736634,0.358042349351218,0,0.591860433821602,0,0,0.969332746095218,1.02044907978036,0,0,0,0,0.796554137998498,2.79679015322043,0.472775363535873,0,2.33283690706603,0,0.885741385813839,6.27101480852121,1.52581736317083,0.221158519862449,0.886642856860642,1.09692698576986,0,0.41827123283581,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.141353071433941,0,0,7.96118080530053,0,0,0,0,1.81983059047828,0,1.1713222286267,0,0.586993856796269,0,1.57833761139756,0,0.30607276163049,0,0.300646838828985,0.103688191397247,0,0.661983911750998,0,0,0,0,0.173559738335131,0,0,0.698906672968121,0,0,0,0,0,0,39.9985911181542,0,0,0.696418755514666,0.195551382734803,0.320635281006135,0.640358984218058,0.19980960958213,1.87317542300338,0,1.02956998717179,0,0,0,0,0,0,0,1.20084057741958,1.09524303113594,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,1.59045937961861,3.13267834056624,42.117324897835,69.1823366084086,45.6984371832104,0,0,1.09349201984444,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93104467356165,1.32506888912221,1.42211251997706,1.05786081394152,0.855434189421647,0.704815022316672,0.427149650270779,0,0,0,0.197611631897944,0,1.27668251554036,0,0,0,0,0,0,0.488105059607853,0.250381861413,11.4681839138014,9.20711127755874,2.98062734118641,0,0,12.2835785208735,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0,0.438568099157414,0.530067437837643,0,0,0,0,0,0.276516872303462,0,0,0,0,0,1.26787274015176,0,0.106691729694141,0,0,0,16.365902403175,14.9298542407913,0,0,1.41539347670307,0,0,0,0.247871528518004,0,0,0,0,0,0,1.99110597799025,0,0.319267718114302,0.82046545696302,0,0.207471757392654,2.42213468447777,0,0,0.11796972334774,0,0,0,0,0,0.300841313397029,0,1.56302802246618,0,0,7.24494822463522,0.135075169236789,0.781078098613847,0,0.380494861163441,0,0,0.496211178389294,0,0,1.60710550763486,0.336283722218824,1.82089681270989,0.91064876540519,0,0.115233987555779,0,0.40781839786099,0.591954962065642,0.118193840883968,0.333694205676207,0.627944742804112,2.51384943865603,0,0.913158720509496,0.647782773655864,0.47775168788705,171.543706023975,0,0,1.04314963381548,0,0.207216164163037,0.3414369541879,0,0.430227358820278,0,0,0,0.68732060563215,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0.79062257427272,0,0,21.1457193215768,0.874238242015829,0,0,0,3.72986087518396,0.891139200981258,0.4226557275834,0,0,0,0,2.85686301769052,14.1157948686277,8.50558486905184,0,0,0.143339583151451,15.1460699705457,0.747906392100062,0,1.5870805215462,0,0,0,0,8.74124575709564,0,12.9525813772317,6.94765253690457,3.76769088092864,0,3.94049230734845,3.7514978221865,0,0.724030971033267,0,0.952257725854961,0,0.0620747142958579,0,4.45530107947154,1.0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| |||
|short_description=p1@LRAT | |||
}} |
Revision as of 03:37, 22 January 2014
Short description: | p1@LRAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRAT_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_ENST00000510733, uc003iom.1_5end |
EntrezGene: | LRAT |
HGNC: | 6685 |
UniProt: | O95237 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.24e-14 | 5 |