FFCP PHASE1:Mm9::chr19:7501312..7501325,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1098|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:7501312..7501325,-|id=chr19:7501312..7501325,-|ontology_enrichment_celltype=CL:0000393!1.99e-12!39;CL:0000211!1.99e-12!39;CL:0000117!2.10e-12!23;CL:0000337!2.10e-12!23;CL:0000540!9.31e-12!33;CL:0000047!9.31e-12!33;CL:0000031!9.31e-12!33;CL:0000404!9.31e-12!33;CL:0000055!2.47e-09!50;CL:0002319!4.40e-09!43;CL:0000221!1.79e-08!44;CL:0000133!1.79e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.20e-22,23;CL:0000337,1.20e-22,23;CL:0000540,1.58e-14,33;CL:0000047,1.58e-14,33;CL:0000031,1.58e-14,33;CL:0000404,1.58e-14,33;CL:0000393,3.79e-13,39;CL:0000211,3.79e-13,39;CL:0002319,3.25e-10,43;CL:0000221,6.81e-10,44;CL:0000133,6.81e-10,44;CL:0002614,1.39e-07,3;CL:0000120,2.94e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.25e-21!73;UBERON:0005743!3.25e-21!73;UBERON:0002346!1.95e-20!71;UBERON:0003075!1.95e-20!71;UBERON:0007284!1.95e-20!71;UBERON:0000073!2.77e-20!75;UBERON:0001016!2.77e-20!75;UBERON:0004121!6.39e-19!102;UBERON:0000924!6.39e-19!102;UBERON:0006601!6.39e-19!102;UBERON:0001049!7.47e-19!52;UBERON:0005068!7.47e-19!52;UBERON:0006241!7.47e-19!52;UBERON:0007135!7.47e-19!52;UBERON:0002616!2.20e-17!49;UBERON:0002020!5.74e-17!34;UBERON:0000955!1.75e-16!50;UBERON:0006238!1.75e-16!50;UBERON:0003056!2.27e-15!49;UBERON:0000033!8.48e-15!63;UBERON:0003080!1.26e-14!40;UBERON:0002791!2.13e-14!29;UBERON:0003528!2.13e-14!29;UBERON:0001893!2.13e-14!29;UBERON:0002780!4.66e-14!39;UBERON:0001890!4.66e-14!39;UBERON:0006240!4.66e-14!39;UBERON:0000956!4.27e-10!21;UBERON:0001869!4.27e-10!21;UBERON:0000203!4.27e-10!21;UBERON:0002619!8.66e-09!17;UBERON:0007811!3.21e-08!86;UBERON:0002021!4.16e-08!10;UBERON:0000411!4.16e-08!10;UBERON:0001950!4.16e-08!10;UBERON:0000025!1.68e-07!114;UBERON:0000153!3.54e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.22e-32,54;UBERON:0002020,1.10e-29,34;UBERON:0001017,3.24e-29,73;UBERON:0001049,5.46e-29,52;UBERON:0005068,5.46e-29,52;UBERON:0006241,5.46e-29,52;UBERON:0007135,5.46e-29,52;UBERON:0001016,3.18e-28,75;UBERON:0002346,4.75e-24,64;UBERON:0003075,4.75e-24,64;UBERON:0007284,4.75e-24,64;UBERON:0003528,1.41e-23,29;UBERON:0002791,1.41e-23,29;UBERON:0001893,1.41e-23,29;UBERON:0002021,2.73e-22,10;UBERON:0000411,2.73e-22,10;UBERON:0001950,2.73e-22,10;UBERON:0004121,4.21e-22,95;UBERON:0000924,4.21e-22,95;UBERON:0006601,4.21e-22,95;UBERON:0002616,6.34e-22,46;UBERON:0003080,1.13e-21,40;UBERON:0000955,2.50e-21,47;UBERON:0006238,2.50e-21,47;UBERON:0002780,3.15e-20,39;UBERON:0001890,3.15e-20,39;UBERON:0006240,3.15e-20,39;UBERON:0010371,3.44e-20,73;UBERON:0003056,1.99e-18,49;UBERON:0010314,1.08e-15,92;UBERON:0000956,1.16e-15,21;UBERON:0001869,1.16e-15,21;UBERON:0000203,1.16e-15,21;UBERON:0002619,1.79e-14,17;UBERON:0000025,2.17e-11,114;UBERON:0004111,3.64e-10,122;UBERON:0002950,2.84e-09,4;UBERON:0001891,2.84e-09,4;UBERON:0009616,2.84e-09,4;UBERON:0010286,2.84e-09,4;UBERON:0002420,3.84e-09,8;UBERON:0007245,3.84e-09,8;UBERON:0010009,3.84e-09,8;UBERON:0010011,3.84e-09,8;UBERON:0000454,3.84e-09,8;UBERON:0011216,6.63e-09,194;UBERON:0002240,7.87e-09,6;UBERON:0005174,7.87e-09,6;UBERON:0001137,7.87e-09,6;UBERON:0003076,1.03e-07,12;UBERON:0003057,1.03e-07,12;UBERON:0002038,1.39e-07,3;UBERON:0009663,1.39e-07,3;UBERON:0009661,1.39e-07,3;UBERON:0000125,1.39e-07,3;UBERON:0002308,1.39e-07,3;UBERON:0001948,2.36e-07,5;UBERON:0002315,2.36e-07,5|phase1_expression=0.160148847104794,0,0,0,1.00179145989269,0,0,0,0,0,0,0.0797721589953364,0,0.174840804837995,0,0.404950534779652,0,0.315462165358238,0,0,0.595303031057488,0.0992909512008853,0.522399578277871,0.319984845586813,0,0,0,0,0.190023419456374,0.756090389279792,0,0,0,0,0.288851619751275,0.166234645358492,0,0.837063261473815,0,0,0,0,0.485510353031154,0.503587271902309,0.304130793658544,0.183546752161682,0,0.436050312760893,0,0.388859798148567,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.771778308107841,0.286533439938757,1.03134418455488,1.41621522601718,4.7609188134483,2.53532561402472,0,0,0.449949858640699,0,0,0.898800331555214,0.384218305321555,0.311068836925433,1.4850653216486,0.630974884054146,2.28520787523043,1.54607978666129,0.61245399607477,1.15014565221884,0.919218786610021,1.10115880999389,1.53224805702225,1.84327839907492,0.791317726381163,1.37231465403614,1.04182674111352,3.35019598801657,2.25105044012672,3.0559649555362,2.94628585473668,3.13217697758026,0.372798891650601,0.075726193333184,0.0755715601067855,0,0,0,0,0,0.448026887097336,0,0,0.259786004602869,0.70667914902068,0,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0.445326417194474,0.346970653532272,0.608930956624282,0.230615497256059,0.452167921657868,0.117588707135705,0.502666365318702,0.247194967734374,0.289198713839823,1.76922110389975,0,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0.510914110417183,0.11981512450592,0,0.254140454146129,1.64769703345305,2.28750301409313,0.6282717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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1098 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:7501312..7501325,- | |||
|description=CAGE_peak_at_chr19:7501312..7501325,- | |||
|id=chr19:7501312..7501325,- | |||
|ontology_enrichment_celltype=CL:0000393!1.99e-12!39;CL:0000211!1.99e-12!39;CL:0000117!2.10e-12!23;CL:0000337!2.10e-12!23;CL:0000540!9.31e-12!33;CL:0000047!9.31e-12!33;CL:0000031!9.31e-12!33;CL:0000404!9.31e-12!33;CL:0000055!2.47e-09!50;CL:0002319!4.40e-09!43;CL:0000221!1.79e-08!44;CL:0000133!1.79e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.20e-22,23;CL:0000337,1.20e-22,23;CL:0000540,1.58e-14,33;CL:0000047,1.58e-14,33;CL:0000031,1.58e-14,33;CL:0000404,1.58e-14,33;CL:0000393,3.79e-13,39;CL:0000211,3.79e-13,39;CL:0002319,3.25e-10,43;CL:0000221,6.81e-10,44;CL:0000133,6.81e-10,44;CL:0002614,1.39e-07,3;CL:0000120,2.94e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.25e-21!73;UBERON:0005743!3.25e-21!73;UBERON:0002346!1.95e-20!71;UBERON:0003075!1.95e-20!71;UBERON:0007284!1.95e-20!71;UBERON:0000073!2.77e-20!75;UBERON:0001016!2.77e-20!75;UBERON:0004121!6.39e-19!102;UBERON:0000924!6.39e-19!102;UBERON:0006601!6.39e-19!102;UBERON:0001049!7.47e-19!52;UBERON:0005068!7.47e-19!52;UBERON:0006241!7.47e-19!52;UBERON:0007135!7.47e-19!52;UBERON:0002616!2.20e-17!49;UBERON:0002020!5.74e-17!34;UBERON:0000955!1.75e-16!50;UBERON:0006238!1.75e-16!50;UBERON:0003056!2.27e-15!49;UBERON:0000033!8.48e-15!63;UBERON:0003080!1.26e-14!40;UBERON:0002791!2.13e-14!29;UBERON:0003528!2.13e-14!29;UBERON:0001893!2.13e-14!29;UBERON:0002780!4.66e-14!39;UBERON:0001890!4.66e-14!39;UBERON:0006240!4.66e-14!39;UBERON:0000956!4.27e-10!21;UBERON:0001869!4.27e-10!21;UBERON:0000203!4.27e-10!21;UBERON:0002619!8.66e-09!17;UBERON:0007811!3.21e-08!86;UBERON:0002021!4.16e-08!10;UBERON:0000411!4.16e-08!10;UBERON:0001950!4.16e-08!10;UBERON:0000025!1.68e-07!114;UBERON:0000153!3.54e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.22e-32,54;UBERON:0002020,1.10e-29,34;UBERON:0001017,3.24e-29,73;UBERON:0001049,5.46e-29,52;UBERON:0005068,5.46e-29,52;UBERON:0006241,5.46e-29,52;UBERON:0007135,5.46e-29,52;UBERON:0001016,3.18e-28,75;UBERON:0002346,4.75e-24,64;UBERON:0003075,4.75e-24,64;UBERON:0007284,4.75e-24,64;UBERON:0003528,1.41e-23,29;UBERON:0002791,1.41e-23,29;UBERON:0001893,1.41e-23,29;UBERON:0002021,2.73e-22,10;UBERON:0000411,2.73e-22,10;UBERON:0001950,2.73e-22,10;UBERON:0004121,4.21e-22,95;UBERON:0000924,4.21e-22,95;UBERON:0006601,4.21e-22,95;UBERON:0002616,6.34e-22,46;UBERON:0003080,1.13e-21,40;UBERON:0000955,2.50e-21,47;UBERON:0006238,2.50e-21,47;UBERON:0002780,3.15e-20,39;UBERON:0001890,3.15e-20,39;UBERON:0006240,3.15e-20,39;UBERON:0010371,3.44e-20,73;UBERON:0003056,1.99e-18,49;UBERON:0010314,1.08e-15,92;UBERON:0000956,1.16e-15,21;UBERON:0001869,1.16e-15,21;UBERON:0000203,1.16e-15,21;UBERON:0002619,1.79e-14,17;UBERON:0000025,2.17e-11,114;UBERON:0004111,3.64e-10,122;UBERON:0002950,2.84e-09,4;UBERON:0001891,2.84e-09,4;UBERON:0009616,2.84e-09,4;UBERON:0010286,2.84e-09,4;UBERON:0002420,3.84e-09,8;UBERON:0007245,3.84e-09,8;UBERON:0010009,3.84e-09,8;UBERON:0010011,3.84e-09,8;UBERON:0000454,3.84e-09,8;UBERON:0011216,6.63e-09,194;UBERON:0002240,7.87e-09,6;UBERON:0005174,7.87e-09,6;UBERON:0001137,7.87e-09,6;UBERON:0003076,1.03e-07,12;UBERON:0003057,1.03e-07,12;UBERON:0002038,1.39e-07,3;UBERON:0009663,1.39e-07,3;UBERON:0009661,1.39e-07,3;UBERON:0000125,1.39e-07,3;UBERON:0002308,1.39e-07,3;UBERON:0001948,2.36e-07,5;UBERON:0002315,2.36e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,1.00179145989269,0,0,0,0,0,0,0.0797721589953364,0,0.174840804837995,0,0.404950534779652,0,0.315462165358238,0,0,0.595303031057488,0.0992909512008853,0.522399578277871,0.319984845586813,0,0,0,0,0.190023419456374,0.756090389279792,0,0,0,0,0.288851619751275,0.166234645358492,0,0.837063261473815,0,0,0,0,0.485510353031154,0.503587271902309,0.304130793658544,0.183546752161682,0,0.436050312760893,0,0.388859798148567,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.771778308107841,0.286533439938757,1.03134418455488,1.41621522601718,4.7609188134483,2.53532561402472,0,0,0.449949858640699,0,0,0.898800331555214,0.384218305321555,0.311068836925433,1.4850653216486,0.630974884054146,2.28520787523043,1.54607978666129,0.61245399607477,1.15014565221884,0.919218786610021,1.10115880999389,1.53224805702225,1.84327839907492,0.791317726381163,1.37231465403614,1.04182674111352,3.35019598801657,2.25105044012672,3.0559649555362,2.94628585473668,3.13217697758026,0.372798891650601,0.075726193333184,0.0755715601067855,0,0,0,0,0,0.448026887097336,0,0,0.259786004602869,0.70667914902068,0,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0.445326417194474,0.346970653532272,0.608930956624282,0.230615497256059,0.452167921657868,0.117588707135705,0.502666365318702,0.247194967734374,0.289198713839823,1.76922110389975,0,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0.510914110417183,0.11981512450592,0,0.254140454146129,1.64769703345305,2.28750301409313,0.628271760564322,2.25971616249959,2.04572365864264,2.28566849015516,1.29793010454206,0.203678727700633,0,0.505445516867349,1.68353484709179,0.260240885925407,0.689706313300419,0,0.30140963567143,0.408218994907967,0.512454881139399,0.374806898238915,0.517406741478031,0,0.378212160335639,0,0.219195732427575,0.278047249225598,0.696504333044333,0,0.199034266818493,0,0,0.568326998791185,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.462801338662135,0,0,0.116765342367169,0.329119699826961,0.164167464079095,0.324275238183423,0,0.439100230582101,0.268412837520744,0.841159794256509,0.823236899034275,0.991256348951394,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.380451252225118,0.474529061544512,0.494096864172033,0.251335208800269,0,0.19496408711912,0.898819408654221,0.432276099749388,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.442655759869801,0.295220295959204,0.156998727841375,0.863780147452604,0,0.333690211432188,0.393117990226406,0,0,0,0,0,0,0,10.0637744569148,0.372140947668503,0.312037673114561,0,0,0,0.739012760666419,0,0.325929952884052,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,3.01582567878545,0,0.491764273019036,0.551873492609465,1.60550589987792,1.52375192569864,0,0,0,0.780877488593277,0.646270193198397,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.790575555893047,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.857348140126369,0.354680467284547,0,0.164549020602121,0.304464949114599,0.23467170806371,0.63549621259146,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,1.11255181206306,0,0.206386867963223,0.555583582109135,0,0.410082683163076,0,0,0,0.138199973804424,1.90934123603023,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0.56369293868419,0.149516546043979,0,0.388902376688095,0,0.506868376472335,0,0.2604087696879,0.104859344425711,0.241584120826006,0,0.948033361884535,0.405450430580328,0,0.129920822977795,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.457240839929999,0.100826185136841,0.194915761479505,0.384847366561318,0,0,0.443971906748129,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,3.95326289831947,3.68260189205742,6.87474616127276,2.57779773515531,8.22099023724771,1.5107877947794,4.05013500139084,4.95353323546643,2.71885445390523,2.5888015587591,0.103787347584177,0,0.170733605754134,0.972426868273176,0.209613162627982,0,0.44449345560323,0.412070114477788,0.962757628775446,0,0.50695859978048,0,0.37456602987953,0.320125762024346,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0,0.238436189947321,0.436039249896986,0.188218760830661,0.169229215783353,0.365855945745545,0.789209134313529,0.135804113845862,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0,0.249810577937946,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr19:7501312..7501325,- | |||
}} |
Latest revision as of 13:21, 4 August 2015
Short description: | p@chr19:7501312..7501325, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:7501312..7501325, - |
Coexpression cluster: | MCL_coexpression_mm9:1098 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.20e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.20e-22 | 23 |
neuron | 1.58e-14 | 33 |
neuronal stem cell | 1.58e-14 | 33 |
neuroblast | 1.58e-14 | 33 |
electrically signaling cell | 1.58e-14 | 33 |
electrically responsive cell | 3.79e-13 | 39 |
electrically active cell | 3.79e-13 | 39 |
neural cell | 3.25e-10 | 43 |
ectodermal cell | 6.81e-10 | 44 |
neurectodermal cell | 6.81e-10 | 44 |
neuron of the substantia nigra | 1.39e-07 | 3 |
granule cell | 2.94e-07 | 3 |