FFCP PHASE1:Mm9::chr3:125641415..125641435,-: Difference between revisions
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{{FFCP|EntrezGene=22239|HGNC=|MCL_coexpression_id=20|UniProt=Q64676|association_with_transcript=32bp_to_ENSMUST00000057944,NM_011674,uc008rfz.1,uc008rgb.1_5end|description=CAGE_peak_3_at_Ugt8a_5end|id=chr3:125641415..125641435,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,3.56e-09,23;CL:0000337,3.56e-09,23;CL:0002610,1.31e-08,3;CL:0002614,2.77e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.53e-17!63;UBERON:0000073!1.73e-16!75;UBERON:0001016!1.73e-16!75;UBERON:0004121!5.93e-16!102;UBERON:0000924!5.93e-16!102;UBERON:0006601!5.93e-16!102;UBERON:0001017!2.99e-15!73;UBERON:0005743!2.99e-15!73;UBERON:0001049!1.33e-14!52;UBERON:0005068!1.33e-14!52;UBERON:0006241!1.33e-14!52;UBERON:0007135!1.33e-14!52;UBERON:0000955!1.97e-14!50;UBERON:0006238!1.97e-14!50;UBERON:0002616!9.83e-14!49;UBERON:0002346!3.98e-13!71;UBERON:0003075!3.98e-13!71;UBERON:0007284!3.98e-13!71;UBERON:0003056!8.69e-11!49;UBERON:0003080!1.23e-09!40;UBERON:0002021!4.15e-09!10;UBERON:0000411!4.15e-09!10;UBERON:0001950!4.15e-09!10;UBERON:0002780!6.42e-09!39;UBERON:0001890!6.42e-09!39;UBERON:0006240!6.42e-09!39;UBERON:0007811!7.12e-09!86;UBERON:0002020!5.26e-08!34;UBERON:0000153!1.84e-07!94;UBERON:0002298!3.91e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.15e-31,54;UBERON:0001049,2.63e-27,52;UBERON:0005068,2.63e-27,52;UBERON:0006241,2.63e-27,52;UBERON:0007135,2.63e-27,52;UBERON:0001017,3.72e-25,73;UBERON:0001016,2.60e-24,75;UBERON:0002346,5.65e-23,64;UBERON:0003075,5.65e-23,64;UBERON:0007284,5.65e-23,64;UBERON:0010371,3.29e-21,73;UBERON:0000955,5.34e-21,47;UBERON:0006238,5.34e-21,47;UBERON:0004121,5.88e-21,95;UBERON:0000924,5.88e-21,95;UBERON:0006601,5.88e-21,95;UBERON:0002616,1.70e-19,46;UBERON:0002020,3.28e-19,34;UBERON:0003080,4.59e-16,40;UBERON:0010314,1.56e-15,92;UBERON:0002780,1.82e-14,39;UBERON:0001890,1.82e-14,39;UBERON:0006240,1.82e-14,39;UBERON:0002021,5.38e-14,10;UBERON:0000411,5.38e-14,10;UBERON:0001950,5.38e-14,10;UBERON:0003056,5.92e-14,49;UBERON:0003528,1.82e-13,29;UBERON:0002791,1.82e-13,29;UBERON:0001893,1.82e-13,29;UBERON:0003076,8.45e-13,12;UBERON:0003057,8.45e-13,12;UBERON:0002950,9.92e-11,4;UBERON:0001891,9.92e-11,4;UBERON:0009616,9.92e-11,4;UBERON:0010286,9.92e-11,4;UBERON:0002240,2.09e-10,6;UBERON:0005174,2.09e-10,6;UBERON:0001137,2.09e-10,6;UBERON:0002619,5.92e-10,17;UBERON:0000956,1.33e-09,21;UBERON:0001869,1.33e-09,21;UBERON:0000203,1.33e-09,21;UBERON:0000025,3.07e-09,114;UBERON:0004111,3.30e-09,122;UBERON:0004684,1.31e-08,3;UBERON:0002275,1.31e-08,3;UBERON:0002038,2.77e-08,3;UBERON:0009663,2.77e-08,3;UBERON:0009661,2.77e-08,3;UBERON:0000125,2.77e-08,3;UBERON:0002308,2.77e-08,3;UBERON:0001948,5.28e-08,5;UBERON:0002315,5.28e-08,5;UBERON:0001896,8.97e-07,2;UBERON:0002298,8.97e-07,2;UBERON:0005290,8.97e-07,2;UBERON:0010096,8.97e-07,2|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0.699561878128147,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0,0,1.71390590642282,3.3130281142742,0,0,0,3.30347642998166,2.93680877595932,5.52983519722476,0,0,0,3.07101298901519,2.25105044012672,3.51435969886663,2.65165726926301,1.56608848879013,0,0.908714319998209,0.906858721281426,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,3.23939865486365,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0.878342391034642,2.93225389538837,0,0,0,0,4.49371918214468,2.28750301409313,0,1.73824320192276,3.83573185995496,6.02585329222724,7.13861557498134,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0.30140963567143,0.204109497453984,0.384341160854549,0.281105173679186,1.81092359517311,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,4.20579897128254,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,1.1270773567308,0.203651327845314,0.193952487167626,0.280543279561274,0.379419222745544,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.390267295715598,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,9.31193421929193,15.003095883802,0,0.504941854408746,0.315508219416257,0.390438744296638,0,0,0,0,0.809621403349789,0,0,1.60660658210904,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0.428674070063185,0,0.356737635204141,1.31639216481697,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,0,9.82754100655701,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0,0,0.474503990371703,0.813277868507395,0.86404272657441,0.627264888043406,0.87345025498471,0.404593039154462,0.247960367176008,0,1.42576470620972,0,0,0,0,0,0,0,0.117357238645754,0,0.734015410979976,0.483168241652012,0.576060012515731,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.82375921308533,3.68260189205742,2.29158205375759,1.3748254587495,0.685082519770642,1.5107877947794,2.02506750069542,0.900642406448441,1.35942722695261,1.55328093525546,0.103787347584177,0,0,0.486213434136588,0,0.183843508450014,0.44449345560323,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0,0.191288332068843,1.10295709559758,1.15933917810211|short_description=p3@Ugt8a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22239 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q64676 | |||
|association_with_transcript=32bp_to_ENSMUST00000057944,NM_011674,uc008rfz.1,uc008rgb.1_5end | |||
|cluster_id=chr3:125641415..125641435,- | |||
|description=CAGE_peak_3_at_Ugt8a_5end | |||
|id=chr3:125641415..125641435,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.56e-09,23;CL:0000337,3.56e-09,23;CL:0002610,1.31e-08,3;CL:0002614,2.77e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.53e-17!63;UBERON:0000073!1.73e-16!75;UBERON:0001016!1.73e-16!75;UBERON:0004121!5.93e-16!102;UBERON:0000924!5.93e-16!102;UBERON:0006601!5.93e-16!102;UBERON:0001017!2.99e-15!73;UBERON:0005743!2.99e-15!73;UBERON:0001049!1.33e-14!52;UBERON:0005068!1.33e-14!52;UBERON:0006241!1.33e-14!52;UBERON:0007135!1.33e-14!52;UBERON:0000955!1.97e-14!50;UBERON:0006238!1.97e-14!50;UBERON:0002616!9.83e-14!49;UBERON:0002346!3.98e-13!71;UBERON:0003075!3.98e-13!71;UBERON:0007284!3.98e-13!71;UBERON:0003056!8.69e-11!49;UBERON:0003080!1.23e-09!40;UBERON:0002021!4.15e-09!10;UBERON:0000411!4.15e-09!10;UBERON:0001950!4.15e-09!10;UBERON:0002780!6.42e-09!39;UBERON:0001890!6.42e-09!39;UBERON:0006240!6.42e-09!39;UBERON:0007811!7.12e-09!86;UBERON:0002020!5.26e-08!34;UBERON:0000153!1.84e-07!94;UBERON:0002298!3.91e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.15e-31,54;UBERON:0001049,2.63e-27,52;UBERON:0005068,2.63e-27,52;UBERON:0006241,2.63e-27,52;UBERON:0007135,2.63e-27,52;UBERON:0001017,3.72e-25,73;UBERON:0001016,2.60e-24,75;UBERON:0002346,5.65e-23,64;UBERON:0003075,5.65e-23,64;UBERON:0007284,5.65e-23,64;UBERON:0010371,3.29e-21,73;UBERON:0000955,5.34e-21,47;UBERON:0006238,5.34e-21,47;UBERON:0004121,5.88e-21,95;UBERON:0000924,5.88e-21,95;UBERON:0006601,5.88e-21,95;UBERON:0002616,1.70e-19,46;UBERON:0002020,3.28e-19,34;UBERON:0003080,4.59e-16,40;UBERON:0010314,1.56e-15,92;UBERON:0002780,1.82e-14,39;UBERON:0001890,1.82e-14,39;UBERON:0006240,1.82e-14,39;UBERON:0002021,5.38e-14,10;UBERON:0000411,5.38e-14,10;UBERON:0001950,5.38e-14,10;UBERON:0003056,5.92e-14,49;UBERON:0003528,1.82e-13,29;UBERON:0002791,1.82e-13,29;UBERON:0001893,1.82e-13,29;UBERON:0003076,8.45e-13,12;UBERON:0003057,8.45e-13,12;UBERON:0002950,9.92e-11,4;UBERON:0001891,9.92e-11,4;UBERON:0009616,9.92e-11,4;UBERON:0010286,9.92e-11,4;UBERON:0002240,2.09e-10,6;UBERON:0005174,2.09e-10,6;UBERON:0001137,2.09e-10,6;UBERON:0002619,5.92e-10,17;UBERON:0000956,1.33e-09,21;UBERON:0001869,1.33e-09,21;UBERON:0000203,1.33e-09,21;UBERON:0000025,3.07e-09,114;UBERON:0004111,3.30e-09,122;UBERON:0004684,1.31e-08,3;UBERON:0002275,1.31e-08,3;UBERON:0002038,2.77e-08,3;UBERON:0009663,2.77e-08,3;UBERON:0009661,2.77e-08,3;UBERON:0000125,2.77e-08,3;UBERON:0002308,2.77e-08,3;UBERON:0001948,5.28e-08,5;UBERON:0002315,5.28e-08,5;UBERON:0001896,8.97e-07,2;UBERON:0002298,8.97e-07,2;UBERON:0005290,8.97e-07,2;UBERON:0010096,8.97e-07,2 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0.699561878128147,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.207379224616955,0,0,1.71390590642282,3.3130281142742,0,0,0,3.30347642998166,2.93680877595932,5.52983519722476,0,0,0,3.07101298901519,2.25105044012672,3.51435969886663,2.65165726926301,1.56608848879013,0,0.908714319998209,0.906858721281426,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,3.23939865486365,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.988779870937496,0,0,0,0,0,0,0.878342391034642,2.93225389538837,0,0,0,0,4.49371918214468,2.28750301409313,0,1.73824320192276,3.83573185995496,6.02585329222724,7.13861557498134,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0.30140963567143,0.204109497453984,0.384341160854549,0.281105173679186,1.81092359517311,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,4.20579897128254,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,1.1270773567308,0.203651327845314,0.193952487167626,0.280543279561274,0.379419222745544,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.390267295715598,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,9.31193421929193,15.003095883802,0,0.504941854408746,0.315508219416257,0.390438744296638,0,0,0,0,0.809621403349789,0,0,1.60660658210904,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0.428674070063185,0,0.356737635204141,1.31639216481697,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,0,9.82754100655701,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0,0,0.474503990371703,0.813277868507395,0.86404272657441,0.627264888043406,0.87345025498471,0.404593039154462,0.247960367176008,0,1.42576470620972,0,0,0,0,0,0,0,0.117357238645754,0,0.734015410979976,0.483168241652012,0.576060012515731,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.82375921308533,3.68260189205742,2.29158205375759,1.3748254587495,0.685082519770642,1.5107877947794,2.02506750069542,0.900642406448441,1.35942722695261,1.55328093525546,0.103787347584177,0,0,0.486213434136588,0,0.183843508450014,0.44449345560323,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0,0.191288332068843,1.10295709559758,1.15933917810211 | |||
|short_description=p3@Ugt8a | |||
}} |
Revision as of 23:50, 5 August 2015
Short description: | p3@Ugt8a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ugt8a_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 32bp_to_ENSMUST00000057944, NM_011674, uc008rfz.1, uc008rgb.1_5end |
EntrezGene: | 22239 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.56e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.56e-09 | 23 |
raphe nuclei neuron | 1.31e-08 | 3 |
neuron of the substantia nigra | 2.77e-08 | 3 |