FFCP PHASE1:Mm9::chr7:134085574..134085588,+: Difference between revisions
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{{FFCP|EntrezGene=233877|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=12bp_to_ENSMUST00000139233_5end|description=CAGE_peak_3_at_Kctd13_5end|id=chr7:134085574..134085588,+|ontology_enrichment_celltype=CL:0002610!1.32e-08!3;CL:0002614!1.75e-08!3;CL:0000117!5.69e-07!23;CL:0000337!5.69e-07!23|ontology_enrichment_celltype_v019_2=CL:0002610,1.06e-11,3;CL:0002614,1.59e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!7.40e-30!50;UBERON:0006238!7.40e-30!50;UBERON:0002616!3.76e-28!49;UBERON:0001049!1.27e-25!52;UBERON:0005068!1.27e-25!52;UBERON:0006241!1.27e-25!52;UBERON:0007135!1.27e-25!52;UBERON:0000033!2.80e-24!63;UBERON:0001017!1.18e-23!73;UBERON:0005743!1.18e-23!73;UBERON:0000073!7.69e-23!75;UBERON:0001016!7.69e-23!75;UBERON:0002346!1.09e-18!71;UBERON:0003075!1.09e-18!71;UBERON:0007284!1.09e-18!71;UBERON:0007811!2.31e-17!86;UBERON:0003080!3.69e-17!40;UBERON:0004121!2.92e-16!102;UBERON:0000924!2.92e-16!102;UBERON:0006601!2.92e-16!102;UBERON:0002298!1.09e-15!6;UBERON:0002780!1.47e-15!39;UBERON:0001890!1.47e-15!39;UBERON:0006240!1.47e-15!39;UBERON:0000153!2.56e-15!94;UBERON:0003056!9.04e-15!49;UBERON:0002020!5.66e-14!34;UBERON:0002791!5.59e-13!29;UBERON:0003528!5.59e-13!29;UBERON:0001893!5.59e-13!29;UBERON:0002950!8.09e-11!4;UBERON:0001891!8.09e-11!4;UBERON:0009616!8.09e-11!4;UBERON:0000025!2.97e-09!114;UBERON:0003076!3.13e-09!12;UBERON:0003057!3.13e-09!12;UBERON:0004684!1.32e-08!3;UBERON:0002275!1.32e-08!3;UBERON:0002038!1.75e-08!3;UBERON:0002308!1.75e-08!3;UBERON:0009663!1.75e-08!3;UBERON:0009661!1.75e-08!3;UBERON:0006331!1.75e-08!3;UBERON:0000125!1.75e-08!3;UBERON:0004111!3.03e-08!122;UBERON:0002021!8.51e-08!10;UBERON:0000411!8.51e-08!10;UBERON:0001950!8.51e-08!10;UBERON:0002420!1.38e-07!8;UBERON:0007245!1.38e-07!8;UBERON:0010009!1.38e-07!8;UBERON:0010011!1.38e-07!8;UBERON:0000454!1.38e-07!8;UBERON:0000064!1.89e-07!99;UBERON:0002619!2.12e-07!17;UBERON:0007023!2.25e-07!51;UBERON:0000956!2.32e-07!21;UBERON:0001869!2.32e-07!21;UBERON:0000203!2.32e-07!21;UBERON:0004733!3.92e-07!6;UBERON:0004732!3.92e-07!6;UBERON:0002028!3.92e-07!6;UBERON:0007277!3.92e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.37e-25,54;UBERON:0000955,3.72e-23,47;UBERON:0006238,3.72e-23,47;UBERON:0001017,1.37e-21,73;UBERON:0002616,3.33e-21,46;UBERON:0001016,6.64e-21,75;UBERON:0001049,7.41e-21,52;UBERON:0005068,7.41e-21,52;UBERON:0006241,7.41e-21,52;UBERON:0007135,7.41e-21,52;UBERON:0002346,2.92e-16,64;UBERON:0003075,2.92e-16,64;UBERON:0007284,2.92e-16,64;UBERON:0004121,1.24e-15,95;UBERON:0000924,1.24e-15,95;UBERON:0006601,1.24e-15,95;UBERON:0002950,6.94e-15,4;UBERON:0001891,6.94e-15,4;UBERON:0009616,6.94e-15,4;UBERON:0010286,6.94e-15,4;UBERON:0003080,2.91e-14,40;UBERON:0010371,8.37e-14,73;UBERON:0002780,1.89e-12,39;UBERON:0001890,1.89e-12,39;UBERON:0006240,1.89e-12,39;UBERON:0003528,2.94e-12,29;UBERON:0002791,2.94e-12,29;UBERON:0001893,2.94e-12,29;UBERON:0004684,1.06e-11,3;UBERON:0002275,1.06e-11,3;UBERON:0002038,1.59e-11,3;UBERON:0009663,1.59e-11,3;UBERON:0009661,1.59e-11,3;UBERON:0000125,1.59e-11,3;UBERON:0002308,1.59e-11,3;UBERON:0003056,3.78e-11,49;UBERON:0010314,3.45e-10,92;UBERON:0002020,3.61e-10,34;UBERON:0004733,6.97e-10,6;UBERON:0004732,6.97e-10,6;UBERON:0002028,6.97e-10,6;UBERON:0007277,6.97e-10,6;UBERON:0001896,1.17e-08,2;UBERON:0002298,1.17e-08,2;UBERON:0005290,1.17e-08,2;UBERON:0010096,1.17e-08,2;UBERON:0002021,6.63e-08,10;UBERON:0000411,6.63e-08,10;UBERON:0001950,6.63e-08,10;UBERON:0007023,1.29e-07,51;UBERON:0000025,1.66e-07,114;UBERON:0003076,1.76e-07,12;UBERON:0003057,1.76e-07,12;UBERON:0002420,1.94e-07,8;UBERON:0007245,1.94e-07,8;UBERON:0010009,1.94e-07,8;UBERON:0010011,1.94e-07,8;UBERON:0000454,1.94e-07,8;UBERON:0000956,7.56e-07,21;UBERON:0001869,7.56e-07,21;UBERON:0000203,7.56e-07,21;UBERON:0004111,9.03e-07,122|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,18.7196997698961,16.5993539510744,27.8027825193801,0,0,0,24.8472869111229,12.9435400307286,16.6550090076723,0,0.142371680799103,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31951992528868,9.63454851341893,0,0,0,0,20.3715269590559,17.3850229071078,0.125654352112864,7.64827008846016,2.55715457330331,22.648896856992,11.0324058886075,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57043814830858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.4541508879124,31.178308633526,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,41.3498423483437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37016503954128,3.7769694869485,0.675022500231806,4.05289082901798,2.71885445390523,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Kctd13}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:233877 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENSMUST00000139233_5end | |||
|cluster_id=chr7:134085574..134085588,+ | |||
|description=CAGE_peak_3_at_Kctd13_5end | |||
|id=chr7:134085574..134085588,+ | |||
|ontology_enrichment_celltype=CL:0002610!1.32e-08!3;CL:0002614!1.75e-08!3;CL:0000117!5.69e-07!23;CL:0000337!5.69e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.06e-11,3;CL:0002614,1.59e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!7.40e-30!50;UBERON:0006238!7.40e-30!50;UBERON:0002616!3.76e-28!49;UBERON:0001049!1.27e-25!52;UBERON:0005068!1.27e-25!52;UBERON:0006241!1.27e-25!52;UBERON:0007135!1.27e-25!52;UBERON:0000033!2.80e-24!63;UBERON:0001017!1.18e-23!73;UBERON:0005743!1.18e-23!73;UBERON:0000073!7.69e-23!75;UBERON:0001016!7.69e-23!75;UBERON:0002346!1.09e-18!71;UBERON:0003075!1.09e-18!71;UBERON:0007284!1.09e-18!71;UBERON:0007811!2.31e-17!86;UBERON:0003080!3.69e-17!40;UBERON:0004121!2.92e-16!102;UBERON:0000924!2.92e-16!102;UBERON:0006601!2.92e-16!102;UBERON:0002298!1.09e-15!6;UBERON:0002780!1.47e-15!39;UBERON:0001890!1.47e-15!39;UBERON:0006240!1.47e-15!39;UBERON:0000153!2.56e-15!94;UBERON:0003056!9.04e-15!49;UBERON:0002020!5.66e-14!34;UBERON:0002791!5.59e-13!29;UBERON:0003528!5.59e-13!29;UBERON:0001893!5.59e-13!29;UBERON:0002950!8.09e-11!4;UBERON:0001891!8.09e-11!4;UBERON:0009616!8.09e-11!4;UBERON:0000025!2.97e-09!114;UBERON:0003076!3.13e-09!12;UBERON:0003057!3.13e-09!12;UBERON:0004684!1.32e-08!3;UBERON:0002275!1.32e-08!3;UBERON:0002038!1.75e-08!3;UBERON:0002308!1.75e-08!3;UBERON:0009663!1.75e-08!3;UBERON:0009661!1.75e-08!3;UBERON:0006331!1.75e-08!3;UBERON:0000125!1.75e-08!3;UBERON:0004111!3.03e-08!122;UBERON:0002021!8.51e-08!10;UBERON:0000411!8.51e-08!10;UBERON:0001950!8.51e-08!10;UBERON:0002420!1.38e-07!8;UBERON:0007245!1.38e-07!8;UBERON:0010009!1.38e-07!8;UBERON:0010011!1.38e-07!8;UBERON:0000454!1.38e-07!8;UBERON:0000064!1.89e-07!99;UBERON:0002619!2.12e-07!17;UBERON:0007023!2.25e-07!51;UBERON:0000956!2.32e-07!21;UBERON:0001869!2.32e-07!21;UBERON:0000203!2.32e-07!21;UBERON:0004733!3.92e-07!6;UBERON:0004732!3.92e-07!6;UBERON:0002028!3.92e-07!6;UBERON:0007277!3.92e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.37e-25,54;UBERON:0000955,3.72e-23,47;UBERON:0006238,3.72e-23,47;UBERON:0001017,1.37e-21,73;UBERON:0002616,3.33e-21,46;UBERON:0001016,6.64e-21,75;UBERON:0001049,7.41e-21,52;UBERON:0005068,7.41e-21,52;UBERON:0006241,7.41e-21,52;UBERON:0007135,7.41e-21,52;UBERON:0002346,2.92e-16,64;UBERON:0003075,2.92e-16,64;UBERON:0007284,2.92e-16,64;UBERON:0004121,1.24e-15,95;UBERON:0000924,1.24e-15,95;UBERON:0006601,1.24e-15,95;UBERON:0002950,6.94e-15,4;UBERON:0001891,6.94e-15,4;UBERON:0009616,6.94e-15,4;UBERON:0010286,6.94e-15,4;UBERON:0003080,2.91e-14,40;UBERON:0010371,8.37e-14,73;UBERON:0002780,1.89e-12,39;UBERON:0001890,1.89e-12,39;UBERON:0006240,1.89e-12,39;UBERON:0003528,2.94e-12,29;UBERON:0002791,2.94e-12,29;UBERON:0001893,2.94e-12,29;UBERON:0004684,1.06e-11,3;UBERON:0002275,1.06e-11,3;UBERON:0002038,1.59e-11,3;UBERON:0009663,1.59e-11,3;UBERON:0009661,1.59e-11,3;UBERON:0000125,1.59e-11,3;UBERON:0002308,1.59e-11,3;UBERON:0003056,3.78e-11,49;UBERON:0010314,3.45e-10,92;UBERON:0002020,3.61e-10,34;UBERON:0004733,6.97e-10,6;UBERON:0004732,6.97e-10,6;UBERON:0002028,6.97e-10,6;UBERON:0007277,6.97e-10,6;UBERON:0001896,1.17e-08,2;UBERON:0002298,1.17e-08,2;UBERON:0005290,1.17e-08,2;UBERON:0010096,1.17e-08,2;UBERON:0002021,6.63e-08,10;UBERON:0000411,6.63e-08,10;UBERON:0001950,6.63e-08,10;UBERON:0007023,1.29e-07,51;UBERON:0000025,1.66e-07,114;UBERON:0003076,1.76e-07,12;UBERON:0003057,1.76e-07,12;UBERON:0002420,1.94e-07,8;UBERON:0007245,1.94e-07,8;UBERON:0010009,1.94e-07,8;UBERON:0010011,1.94e-07,8;UBERON:0000454,1.94e-07,8;UBERON:0000956,7.56e-07,21;UBERON:0001869,7.56e-07,21;UBERON:0000203,7.56e-07,21;UBERON:0004111,9.03e-07,122 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.122490799214954,0,0,18.7196997698961,16.5993539510744,27.8027825193801,0,0,0,24.8472869111229,12.9435400307286,16.6550090076723,0,0.142371680799103,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31951992528868,9.63454851341893,0,0,0,0,20.3715269590559,17.3850229071078,0.125654352112864,7.64827008846016,2.55715457330331,22.648896856992,11.0324058886075,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57043814830858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.4541508879124,31.178308633526,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,41.3498423483437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37016503954128,3.7769694869485,0.675022500231806,4.05289082901798,2.71885445390523,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Kctd13 | |||
}} |
Revision as of 06:12, 4 August 2015
Short description: | p3@Kctd13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kctd13_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 12bp_to_ENSMUST00000139233_5end |
EntrezGene: | 233877 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.06e-11 | 3 |
neuron of the substantia nigra | 1.59e-11 | 3 |