FFCP PHASE1:Mm9::chr10:10800890..10800930,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr10:10800890..10800930,- | |id=chr10:10800890..10800930,- | ||
|ontology_enrichment_celltype=CL:0000117!3.84e-16!23;CL:0000337!3.84e-16!23;CL:0000540!1.99e-09!33;CL:0000047!1.99e-09!33;CL:0000031!1.99e-09!33;CL:0000404!1.99e-09!33;CL:0000393!3.96e-07!39;CL:0000211!3.96e-07!39 | |ontology_enrichment_celltype=CL:0000117!3.84e-16!23;CL:0000337!3.84e-16!23;CL:0000540!1.99e-09!33;CL:0000047!1.99e-09!33;CL:0000031!1.99e-09!33;CL:0000404!1.99e-09!33;CL:0000393!3.96e-07!39;CL:0000211!3.96e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.92e-11,23;CL:0000337,3.92e-11,23;CL:0002610,2.14e-09,3;CL:0002614,8.06e-08,3;CL:0000540,4.01e-07,33;CL:0000047,4.01e-07,33;CL:0000031,4.01e-07,33;CL:0000404,4.01e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.23e-31!52;UBERON:0005068!2.23e-31!52;UBERON:0006241!2.23e-31!52;UBERON:0007135!2.23e-31!52;UBERON:0000955!3.96e-30!50;UBERON:0006238!3.96e-30!50;UBERON:0002616!7.04e-29!49;UBERON:0002020!3.18e-28!34;UBERON:0001017!4.56e-26!73;UBERON:0005743!4.56e-26!73;UBERON:0000073!5.65e-25!75;UBERON:0001016!5.65e-25!75;UBERON:0000033!1.33e-23!63;UBERON:0002791!5.07e-23!29;UBERON:0003528!5.07e-23!29;UBERON:0001893!5.07e-23!29;UBERON:0002346!1.49e-21!71;UBERON:0003075!1.49e-21!71;UBERON:0007284!1.49e-21!71;UBERON:0003080!9.27e-21!40;UBERON:0002780!1.11e-19!39;UBERON:0001890!1.11e-19!39;UBERON:0006240!1.11e-19!39;UBERON:0003056!2.24e-17!49;UBERON:0000956!6.35e-17!21;UBERON:0001869!6.35e-17!21;UBERON:0000203!6.35e-17!21;UBERON:0004121!3.71e-16!102;UBERON:0000924!3.71e-16!102;UBERON:0006601!3.71e-16!102;UBERON:0002619!5.02e-14!17;UBERON:0007811!7.87e-14!86;UBERON:0002021!1.46e-12!10;UBERON:0000411!1.46e-12!10;UBERON:0001950!1.46e-12!10;UBERON:0000153!1.31e-11!94;UBERON:0003076!3.27e-11!12;UBERON:0003057!3.27e-11!12;UBERON:0002298!9.58e-08!6;UBERON:0000025!1.61e-07!114;UBERON:0002240!2.28e-07!6;UBERON:0005174!2.28e-07!6;UBERON:0001137!2.28e-07!6;UBERON:0002420!3.25e-07!8;UBERON:0007245!3.25e-07!8;UBERON:0010009!3.25e-07!8;UBERON:0010011!3.25e-07!8;UBERON:0000454!3.25e-07!8 | |ontology_enrichment_uberon=UBERON:0001049!2.23e-31!52;UBERON:0005068!2.23e-31!52;UBERON:0006241!2.23e-31!52;UBERON:0007135!2.23e-31!52;UBERON:0000955!3.96e-30!50;UBERON:0006238!3.96e-30!50;UBERON:0002616!7.04e-29!49;UBERON:0002020!3.18e-28!34;UBERON:0001017!4.56e-26!73;UBERON:0005743!4.56e-26!73;UBERON:0000073!5.65e-25!75;UBERON:0001016!5.65e-25!75;UBERON:0000033!1.33e-23!63;UBERON:0002791!5.07e-23!29;UBERON:0003528!5.07e-23!29;UBERON:0001893!5.07e-23!29;UBERON:0002346!1.49e-21!71;UBERON:0003075!1.49e-21!71;UBERON:0007284!1.49e-21!71;UBERON:0003080!9.27e-21!40;UBERON:0002780!1.11e-19!39;UBERON:0001890!1.11e-19!39;UBERON:0006240!1.11e-19!39;UBERON:0003056!2.24e-17!49;UBERON:0000956!6.35e-17!21;UBERON:0001869!6.35e-17!21;UBERON:0000203!6.35e-17!21;UBERON:0004121!3.71e-16!102;UBERON:0000924!3.71e-16!102;UBERON:0006601!3.71e-16!102;UBERON:0002619!5.02e-14!17;UBERON:0007811!7.87e-14!86;UBERON:0002021!1.46e-12!10;UBERON:0000411!1.46e-12!10;UBERON:0001950!1.46e-12!10;UBERON:0000153!1.31e-11!94;UBERON:0003076!3.27e-11!12;UBERON:0003057!3.27e-11!12;UBERON:0002298!9.58e-08!6;UBERON:0000025!1.61e-07!114;UBERON:0002240!2.28e-07!6;UBERON:0005174!2.28e-07!6;UBERON:0001137!2.28e-07!6;UBERON:0002420!3.25e-07!8;UBERON:0007245!3.25e-07!8;UBERON:0010009!3.25e-07!8;UBERON:0010011!3.25e-07!8;UBERON:0000454!3.25e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.78e-38,54;UBERON:0001049,8.58e-34,52;UBERON:0005068,8.58e-34,52;UBERON:0006241,8.58e-34,52;UBERON:0007135,8.58e-34,52;UBERON:0001017,2.96e-31,73;UBERON:0001016,2.97e-30,75;UBERON:0000955,1.21e-27,47;UBERON:0006238,1.21e-27,47;UBERON:0002346,2.41e-26,64;UBERON:0003075,2.41e-26,64;UBERON:0007284,2.41e-26,64;UBERON:0002020,7.36e-26,34;UBERON:0002616,1.12e-25,46;UBERON:0004121,1.51e-22,95;UBERON:0000924,1.51e-22,95;UBERON:0006601,1.51e-22,95;UBERON:0010371,2.31e-22,73;UBERON:0002021,5.95e-20,10;UBERON:0000411,5.95e-20,10;UBERON:0001950,5.95e-20,10;UBERON:0003080,1.01e-19,40;UBERON:0003528,1.28e-19,29;UBERON:0002791,1.28e-19,29;UBERON:0001893,1.28e-19,29;UBERON:0002780,4.94e-18,39;UBERON:0001890,4.94e-18,39;UBERON:0006240,4.94e-18,39;UBERON:0010314,1.65e-16,92;UBERON:0003076,1.37e-15,12;UBERON:0003057,1.37e-15,12;UBERON:0003056,2.68e-15,49;UBERON:0002619,7.32e-14,17;UBERON:0000956,2.80e-13,21;UBERON:0001869,2.80e-13,21;UBERON:0000203,2.80e-13,21;UBERON:0000025,3.66e-12,114;UBERON:0004111,5.70e-11,122;UBERON:0002950,3.97e-10,4;UBERON:0001891,3.97e-10,4;UBERON:0009616,3.97e-10,4;UBERON:0010286,3.97e-10,4;UBERON:0002240,8.56e-10,6;UBERON:0005174,8.56e-10,6;UBERON:0001137,8.56e-10,6;UBERON:0004684,2.14e-09,3;UBERON:0002275,2.14e-09,3;UBERON:0001948,7.92e-08,5;UBERON:0002315,7.92e-08,5;UBERON:0002038,8.06e-08,3;UBERON:0009663,8.06e-08,3;UBERON:0009661,8.06e-08,3;UBERON:0000125,8.06e-08,3;UBERON:0002308,8.06e-08,3;UBERON:0011216,1.07e-07,194;UBERON:0002420,1.33e-07,8;UBERON:0007245,1.33e-07,8;UBERON:0010009,1.33e-07,8;UBERON:0010011,1.33e-07,8;UBERON:0000454,1.33e-07,8;UBERON:0004733,2.09e-07,6;UBERON:0004732,2.09e-07,6;UBERON:0002028,2.09e-07,6;UBERON:0007277,2.09e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,1.42825492201902,1.54607978666129,0.244981598429908,0.191690942036473,0.919218786610021,6.60695285996332,9.57655035638908,6.91229399653096,0.659431438650969,1.00636407962651,0,1.3959149950069,2.25105044012672,1.98637722109853,1.47314292736834,1.56608848879013,0.559198337475902,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.66176630138106,12.7762491156208,0,0,0,0,3.44518470631092,10.0650132620098,0.502617408451458,5.04090528557602,3.83573185995496,5.81806524766768,10.2211995732687,0,0,0,0.210441855886474,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72927835405207,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,6.42642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.76195141904306,4.58316410751517,3.09335728218638,3.42541259885321,3.7769694869485,2.70009000092722,5.85417564191487,0.906284817968409,3.62432218226274,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0,0.505394423527595,0.25347929989024,0.377252682772152,0.187283014939765,0.256100609619477,0.402048282689293,0.476293691283074,0.347652977834566,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.814824683075171,1.12228454331548,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.499621155875892,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,1.42825492201902,1.54607978666129,0.244981598429908,0.191690942036473,0.919218786610021,6.60695285996332,9.57655035638908,6.91229399653096,0.659431438650969,1.00636407962651,0,1.3959149950069,2.25105044012672,1.98637722109853,1.47314292736834,1.56608848879013,0.559198337475902,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.66176630138106,12.7762491156208,0,0,0,0,3.44518470631092,10.0650132620098,0.502617408451458,5.04090528557602,3.83573185995496,5.81806524766768,10.2211995732687,0,0,0,0.210441855886474,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72927835405207,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,6.42642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.76195141904306,4.58316410751517,3.09335728218638,3.42541259885321,3.7769694869485,2.70009000092722,5.85417564191487,0.906284817968409,3.62432218226274,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0,0.505394423527595,0.25347929989024,0.377252682772152,0.187283014939765,0.256100609619477,0.402048282689293,0.476293691283074,0.347652977834566,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0,0.282328141245992,0.338458431566706,0.182927972872773,0.263069711437843,0.814824683075171,1.12228454331548,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.499621155875892,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p2@Grm1 | |short_description=p2@Grm1 | ||
}} | }} |
Revision as of 02:02, 14 November 2012
Short description: | p2@Grm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Grm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -136bp_to_ENSMUST00000105560, uc007ejh.2_5end |
EntrezGene: | Grm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.92e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.92e-11 | 23 |
raphe nuclei neuron | 2.14e-09 | 3 |
neuron of the substantia nigra | 8.06e-08 | 3 |
neuron | 4.01e-07 | 33 |
neuronal stem cell | 4.01e-07 | 33 |
neuroblast | 4.01e-07 | 33 |
electrically signaling cell | 4.01e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.