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FFCP PHASE1:Mm9::chr3:106904514..106904567,+: Difference between revisions

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|id=chr3:106904514..106904567,+
|id=chr3:106904514..106904567,+
|ontology_enrichment_celltype=CL:0000117!3.32e-14!23;CL:0000337!3.32e-14!23;CL:0000540!1.36e-12!33;CL:0000047!1.36e-12!33;CL:0000031!1.36e-12!33;CL:0000404!1.36e-12!33;CL:0000221!1.18e-09!44;CL:0000133!1.18e-09!44;CL:0002319!3.25e-09!43;CL:0000393!6.79e-09!39;CL:0000211!6.79e-09!39
|ontology_enrichment_celltype=CL:0000117!3.32e-14!23;CL:0000337!3.32e-14!23;CL:0000540!1.36e-12!33;CL:0000047!1.36e-12!33;CL:0000031!1.36e-12!33;CL:0000404!1.36e-12!33;CL:0000221!1.18e-09!44;CL:0000133!1.18e-09!44;CL:0002319!3.25e-09!43;CL:0000393!6.79e-09!39;CL:0000211!6.79e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,7.46e-19,23;CL:0000337,7.46e-19,23;CL:0000540,1.11e-11,33;CL:0000047,1.11e-11,33;CL:0000031,1.11e-11,33;CL:0000404,1.11e-11,33;CL:0000393,3.52e-09,39;CL:0000211,3.52e-09,39;CL:0000221,1.40e-08,44;CL:0000133,1.40e-08,44;CL:0002319,6.48e-08,43;CL:0002610,7.37e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.39e-26!75;UBERON:0001016!1.39e-26!75;UBERON:0001017!8.53e-26!73;UBERON:0005743!8.53e-26!73;UBERON:0000033!1.46e-24!63;UBERON:0001049!2.69e-23!52;UBERON:0005068!2.69e-23!52;UBERON:0006241!2.69e-23!52;UBERON:0007135!2.69e-23!52;UBERON:0002346!2.12e-22!71;UBERON:0003075!2.12e-22!71;UBERON:0007284!2.12e-22!71;UBERON:0004121!2.25e-22!102;UBERON:0000924!2.25e-22!102;UBERON:0006601!2.25e-22!102;UBERON:0000955!2.67e-22!50;UBERON:0006238!2.67e-22!50;UBERON:0002616!1.39e-21!49;UBERON:0003056!2.63e-20!49;UBERON:0002020!8.95e-19!34;UBERON:0003080!1.58e-17!40;UBERON:0002780!1.05e-16!39;UBERON:0001890!1.05e-16!39;UBERON:0006240!1.05e-16!39;UBERON:0002791!1.84e-15!29;UBERON:0003528!1.84e-15!29;UBERON:0001893!1.84e-15!29;UBERON:0007811!2.94e-15!86;UBERON:0000153!1.44e-12!94;UBERON:0000956!2.24e-10!21;UBERON:0001869!2.24e-10!21;UBERON:0000203!2.24e-10!21;UBERON:0002619!6.17e-09!17;UBERON:0002021!7.13e-09!10;UBERON:0000411!7.13e-09!10;UBERON:0001950!7.13e-09!10
|ontology_enrichment_uberon=UBERON:0000073!1.39e-26!75;UBERON:0001016!1.39e-26!75;UBERON:0001017!8.53e-26!73;UBERON:0005743!8.53e-26!73;UBERON:0000033!1.46e-24!63;UBERON:0001049!2.69e-23!52;UBERON:0005068!2.69e-23!52;UBERON:0006241!2.69e-23!52;UBERON:0007135!2.69e-23!52;UBERON:0002346!2.12e-22!71;UBERON:0003075!2.12e-22!71;UBERON:0007284!2.12e-22!71;UBERON:0004121!2.25e-22!102;UBERON:0000924!2.25e-22!102;UBERON:0006601!2.25e-22!102;UBERON:0000955!2.67e-22!50;UBERON:0006238!2.67e-22!50;UBERON:0002616!1.39e-21!49;UBERON:0003056!2.63e-20!49;UBERON:0002020!8.95e-19!34;UBERON:0003080!1.58e-17!40;UBERON:0002780!1.05e-16!39;UBERON:0001890!1.05e-16!39;UBERON:0006240!1.05e-16!39;UBERON:0002791!1.84e-15!29;UBERON:0003528!1.84e-15!29;UBERON:0001893!1.84e-15!29;UBERON:0007811!2.94e-15!86;UBERON:0000153!1.44e-12!94;UBERON:0000956!2.24e-10!21;UBERON:0001869!2.24e-10!21;UBERON:0000203!2.24e-10!21;UBERON:0002619!6.17e-09!17;UBERON:0002021!7.13e-09!10;UBERON:0000411!7.13e-09!10;UBERON:0001950!7.13e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.93e-38,54;UBERON:0001049,4.77e-35,52;UBERON:0005068,4.77e-35,52;UBERON:0006241,4.77e-35,52;UBERON:0007135,4.77e-35,52;UBERON:0001017,1.02e-34,73;UBERON:0002346,1.58e-33,64;UBERON:0003075,1.58e-33,64;UBERON:0007284,1.58e-33,64;UBERON:0001016,1.73e-33,75;UBERON:0004121,3.88e-31,95;UBERON:0000924,3.88e-31,95;UBERON:0006601,3.88e-31,95;UBERON:0002020,1.15e-29,34;UBERON:0010371,1.29e-29,73;UBERON:0000955,3.28e-28,47;UBERON:0006238,3.28e-28,47;UBERON:0002616,6.72e-27,46;UBERON:0003056,2.11e-23,49;UBERON:0003528,4.29e-23,29;UBERON:0002791,4.29e-23,29;UBERON:0001893,4.29e-23,29;UBERON:0003080,1.20e-22,40;UBERON:0010314,2.89e-21,92;UBERON:0002780,3.64e-21,39;UBERON:0001890,3.64e-21,39;UBERON:0006240,3.64e-21,39;UBERON:0002021,9.77e-17,10;UBERON:0000411,9.77e-17,10;UBERON:0001950,9.77e-17,10;UBERON:0002619,1.21e-14,17;UBERON:0000956,2.83e-13,21;UBERON:0001869,2.83e-13,21;UBERON:0000203,2.83e-13,21;UBERON:0003076,5.52e-13,12;UBERON:0003057,5.52e-13,12;UBERON:0002420,9.90e-12,8;UBERON:0007245,9.90e-12,8;UBERON:0010009,9.90e-12,8;UBERON:0010011,9.90e-12,8;UBERON:0000454,9.90e-12,8;UBERON:0000025,1.10e-10,114;UBERON:0004111,4.28e-10,122;UBERON:0002240,1.10e-09,6;UBERON:0005174,1.10e-09,6;UBERON:0001137,1.10e-09,6;UBERON:0001948,6.18e-08,5;UBERON:0002315,6.18e-08,5;UBERON:0002950,9.98e-08,4;UBERON:0001891,9.98e-08,4;UBERON:0009616,9.98e-08,4;UBERON:0010286,9.98e-08,4;UBERON:0000369,2.48e-07,5;UBERON:0002435,2.48e-07,5;UBERON:0000204,2.48e-07,5;UBERON:0010082,2.48e-07,5;UBERON:0004684,7.37e-07,3;UBERON:0002275,7.37e-07,3
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,9.43980520676875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.68046899571232,0,0,0,3.23706337375356,3.70293685490423,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.540023753326763,0.630974884054146,15.996455126613,15.9025349485162,0.489963196859816,0.670918297127655,1.83843757322004,127.734421959291,109.683423415176,92.9319526200273,2.1101806036831,2.65314166446988,1.56274011167028,76.216958727377,38.8306200921859,42.3251146341764,15.9099436155781,11.10499110233,3.72798891650601,0.530083353332288,0.604572480854284,0.289864488701678,0,0,0,0,0,2.80888840263504,0,0,0,1.40843419776681,0,0,0,0,0,0,1.82694207550496,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0.433798070759735,0,0,0,0,0,47.4304891158706,54.2466970646849,0.255457055208591,0,0,0,95.1170560220624,59.4750783664214,1.88481528169297,62.5767552692195,52.6773842100481,70.2323590611313,52.0794454447502,0.203678727700633,0,0,2.73574412652416,0.260240885925407,0,0.360124259610698,0.90422890701429,1.08858398642125,0.896796041993948,1.49922759295566,9.05461797586555,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,34.4875515645169,2.57261530948211,0,0,0,0,0,0.403367049246685,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.655453258862952,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,97.7753093025653,87.9087649441524,0,0.252470927204373,0,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0,0,35.9879874392424,0.425820255624806,0,0.325773918707152,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,3.40439605753788,0,0,0.214337035031592,0.177340233642274,0.713475270408282,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0.291480836629851,111.996882414348,0.170870880797853,0,0,0,0,0,0,0.139951452323658,0,0,0,0.203319467126849,0,0,0.218362563746178,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0,0.38983152295901,0,0.233753804363138,0,0,0,0,0,0,0.549454872801795,0,0,44.0506437241312,36.365693684067,45.8316410751517,38.8388192096734,68.5082519770642,80.827147020698,56.7018900194717,62.5946472481666,56.6428011230256,65.2377992807293,0.103787347584177,0.399024873401031,0.682934423016537,0,0.419226325255965,0.183843508450014,0.666740183404846,0.618105171716683,2.24643446714271,0.252697211763798,0.25347929989024,0.377252682772152,0.842773567228942,0.704276676453562,0.574354689556133,0.952587382566147,0.579421629724277,0.192909220463705,0,0.735994600671987,0.685738504770831,0.70990322463735,0.953744759789284,0.436039249896986,0.752875043322645,0.761531471025089,0.548783918618318,0.526139422875686,0.407412341537585,1.68342681497322,0.949080144993393,0.29551344712669,0,0.309873682371932,0.192906610981141,1.24905288968973,0.701794825336225,0.644613162144895,0.57386499620653,1.32354851471709,0.927471342481686
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,9.43980520676875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.68046899571232,0,0,0,3.23706337375356,3.70293685490423,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.311068836925433,0.540023753326763,0.630974884054146,15.996455126613,15.9025349485162,0.489963196859816,0.670918297127655,1.83843757322004,127.734421959291,109.683423415176,92.9319526200273,2.1101806036831,2.65314166446988,1.56274011167028,76.216958727377,38.8306200921859,42.3251146341764,15.9099436155781,11.10499110233,3.72798891650601,0.530083353332288,0.604572480854284,0.289864488701678,0,0,0,0,0,2.80888840263504,0,0,0,1.40843419776681,0,0,0,0,0,0,1.82694207550496,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0.433798070759735,0,0,0,0,0,47.4304891158706,54.2466970646849,0.255457055208591,0,0,0,95.1170560220624,59.4750783664214,1.88481528169297,62.5767552692195,52.6773842100481,70.2323590611313,52.0794454447502,0.203678727700633,0,0,2.73574412652416,0.260240885925407,0,0.360124259610698,0.90422890701429,1.08858398642125,0.896796041993948,1.49922759295566,9.05461797586555,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,34.4875515645169,2.57261530948211,0,0,0,0,0,0.403367049246685,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.655453258862952,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,97.7753093025653,87.9087649441524,0,0.252470927204373,0,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0,0,35.9879874392424,0.425820255624806,0,0.325773918707152,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,3.40439605753788,0,0,0.214337035031592,0.177340233642274,0.713475270408282,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0.291480836629851,111.996882414348,0.170870880797853,0,0,0,0,0,0,0.139951452323658,0,0,0,0.203319467126849,0,0,0.218362563746178,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0.15241361331,0,0.38983152295901,0,0.233753804363138,0,0,0,0,0,0,0.549454872801795,0,0,44.0506437241312,36.365693684067,45.8316410751517,38.8388192096734,68.5082519770642,80.827147020698,56.7018900194717,62.5946472481666,56.6428011230256,65.2377992807293,0.103787347584177,0.399024873401031,0.682934423016537,0,0.419226325255965,0.183843508450014,0.666740183404846,0.618105171716683,2.24643446714271,0.252697211763798,0.25347929989024,0.377252682772152,0.842773567228942,0.704276676453562,0.574354689556133,0.952587382566147,0.579421629724277,0.192909220463705,0,0.735994600671987,0.685738504770831,0.70990322463735,0.953744759789284,0.436039249896986,0.752875043322645,0.761531471025089,0.548783918618318,0.526139422875686,0.407412341537585,1.68342681497322,0.949080144993393,0.29551344712669,0,0.309873682371932,0.192906610981141,1.24905288968973,0.701794825336225,0.644613162144895,0.57386499620653,1.32354851471709,0.927471342481686
|short_description=p1@Kcna2
|short_description=p1@Kcna2
}}
}}

Revision as of 20:45, 14 November 2012

Short description:p1@Kcna2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kcna2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 29bp_to_ENSMUST00000038695, NM_008417, uc008qws.1_5end
EntrezGene:Kcna2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Kcna2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.90
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3127.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3109.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D792.93
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E476.22
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E538.83
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I642.33
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.91
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B247.43
cerebellum, neonate N30.CNhs11135.1395-42I254.25
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A495.12
corpus striatum, adult.CNhs10487.19-21D859.48
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D562.58
cortex, neonate N30.CNhs11107.1392-42F252.68
diencephalon, adult.CNhs10482.20-12F270.23
diencephalon, neonate N30.CNhs11201.1388-42B252.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E834.49
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C297.78
medulla oblongata, neonate N30.CNhs11200.1396-42A387.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I935.99
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C9112.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A144.05
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A236.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A345.83
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D738.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A468.51
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A580.83
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A656.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A762.59
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A856.64
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A965.24
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.93e-3854
neural tube4.77e-3552
neural rod4.77e-3552
future spinal cord4.77e-3552
neural keel4.77e-3552
central nervous system1.02e-3473
neurectoderm1.58e-3364
neural plate1.58e-3364
presumptive neural plate1.58e-3364
nervous system1.73e-3375
ectoderm-derived structure3.88e-3195
ectoderm3.88e-3195
presumptive ectoderm3.88e-3195
gray matter1.15e-2934
ecto-epithelium1.29e-2973
brain3.28e-2847
future brain3.28e-2847
regional part of brain6.72e-2746
pre-chordal neural plate2.11e-2349
brain grey matter4.29e-2329
regional part of telencephalon4.29e-2329
telencephalon4.29e-2329
anterior neural tube1.20e-2240
structure with developmental contribution from neural crest2.89e-2192
regional part of forebrain3.64e-2139
forebrain3.64e-2139
future forebrain3.64e-2139
occipital lobe9.77e-1710
visual cortex9.77e-1710
neocortex9.77e-1710
regional part of cerebral cortex1.21e-1417
cerebral cortex2.83e-1321
cerebral hemisphere2.83e-1321
pallium2.83e-1321
posterior neural tube5.52e-1312
chordal neural plate5.52e-1312
basal ganglion9.90e-128
nuclear complex of neuraxis9.90e-128
aggregate regional part of brain9.90e-128
collection of basal ganglia9.90e-128
cerebral subcortex9.90e-128
tube1.10e-10114
anatomical conduit4.28e-10122
spinal cord1.10e-096
dorsal region element1.10e-096
dorsum1.10e-096
regional part of spinal cord6.18e-085
gray matter of spinal cord6.18e-085
regional part of midbrain9.98e-084
midbrain9.98e-084
presumptive midbrain9.98e-084
midbrain neural tube9.98e-084
corpus striatum2.48e-075
striatum2.48e-075
ventral part of telencephalon2.48e-075
future corpus striatum2.48e-075
raphe nuclei7.37e-073
reticular formation7.37e-073







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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