FFCP PHASE1:Hg19::chr10:102107191..102107209,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6319 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10571 | |||
|TSSclassifier=W | |||
|UniProt=O00767 | |||
|association_with_transcript=310bp_to_ENST00000370355_5end | |||
|coexpression_cluster_id=C173 | |||
|description=CAGE_peak_7_at_SCD_5end | |||
|id=chr10:102107191..102107209,+ | |||
|ontology_enrichment_celltype=CL:0000325!6.24e-11!39;CL:0000066!9.08e-09!254;CL:0000136!2.19e-08!15;CL:0000223!6.51e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.89e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.40e-10,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.56e-17!365;UBERON:0004121!1.27e-13!169;UBERON:0000033!1.34e-13!123;UBERON:0000924!1.49e-13!173;UBERON:0006601!1.49e-13!173;UBERON:0000119!3.07e-13!312;UBERON:0000483!9.77e-13!309;UBERON:0000153!2.46e-12!129;UBERON:0007811!2.46e-12!129;UBERON:0000481!2.51e-12!347;UBERON:0005743!3.59e-12!86;UBERON:0001017!7.31e-12!82;UBERON:0000477!2.14e-11!286;UBERON:0000955!5.28e-11!69;UBERON:0006238!5.28e-11!69;UBERON:0000064!5.51e-11!219;UBERON:0000073!1.75e-10!94;UBERON:0001016!1.75e-10!94;UBERON:0002616!2.45e-10!59;UBERON:0001049!3.12e-10!57;UBERON:0005068!3.12e-10!57;UBERON:0006241!3.12e-10!57;UBERON:0007135!3.12e-10!57;UBERON:0003075!1.03e-09!86;UBERON:0007284!1.03e-09!86;UBERON:0002346!1.52e-09!90;UBERON:0003056!1.30e-08!61;UBERON:0000922!1.62e-08!612;UBERON:0002050!4.63e-08!605;UBERON:0005423!4.63e-08!605;UBERON:0000923!4.91e-08!604;UBERON:0005291!4.91e-08!604;UBERON:0006598!4.91e-08!604;UBERON:0002532!4.91e-08!604;UBERON:0004111!7.35e-08!241;UBERON:0004119!9.99e-08!169;UBERON:0000925!9.99e-08!169;UBERON:0006595!9.99e-08!169;UBERON:0000468!1.03e-07!659;UBERON:0000063!1.58e-07!97;UBERON:0002020!1.64e-07!34;UBERON:0003528!1.64e-07!34;UBERON:0001893!4.73e-07!34;UBERON:0002791!4.80e-07!33;UBERON:0000025!7.07e-07!194;UBERON:0000062!7.09e-07!511;UBERON:0003080!7.17e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.42e-07;9!UBERON:0001557;1.42e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.80e-13,223;UBERON:0004121,1.56e-11,171;UBERON:0000924,1.56e-11,171;UBERON:0006601,1.56e-11,171;UBERON:0000119,6.55e-11,309;UBERON:0001017,1.46e-10,81;UBERON:0000483,1.46e-10,306;UBERON:0010371,3.18e-10,104;UBERON:0000955,1.79e-09,68;UBERON:0006238,1.79e-09,68;UBERON:0001049,2.62e-09,56;UBERON:0005068,2.62e-09,56;UBERON:0006241,2.62e-09,56;UBERON:0007135,2.62e-09,56;UBERON:0001016,3.35e-09,89;UBERON:0003075,5.30e-09,82;UBERON:0007284,5.30e-09,82;UBERON:0002346,3.87e-08,86;UBERON:0000073,7.65e-08,53;UBERON:0002616,7.65e-08,53;UBERON:0001737,1.30e-07,9;UBERON:0010314,1.76e-07,132;UBERON:0004119,2.55e-07,160;UBERON:0000925,2.55e-07,160;UBERON:0006595,2.55e-07,160;UBERON:0002050,2.66e-07,564;UBERON:0000923,3.18e-07,560;UBERON:0010316,3.18e-07,560;UBERON:0005291,3.18e-07,560;UBERON:0006598,3.18e-07,560;UBERON:0010317,3.18e-07,560;UBERON:0002532,3.18e-07,560;UBERON:0003056,5.11e-07,61 | |||
|phase1_expression=1.45342703416445,168.283011778313,12.2630331563495,5.00366491765652,34.4160042709012,1.74467704820074,70.923965887127,6.31719873426831,45.9686705631716,0.737201809504527,1.39560233594486,0.873765488520689,2.37390280405608,0.990130823680373,1.98838425436749,1.34465029290355,0,0,0,2.21617904538218,4.28401451612931,1.88072832886853,0.572471974262113,3.14811177667634,4.3939923858181,1.29902789771517,0.903106483949403,0.944529375764151,0,0,0,1.83884244895785,3.0120591877825,7.02532619316897,0.387336002901508,0.142169232487422,0,0,0.401088894940283,0,0,0.971680998056939,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.40648818027883,0,0,0,3.1811437882044,0,2.07976597760949,3.32594096193846,4.91874799881506,0.392937226493138,0.728590576585084,3.70784442784429,0,0.174129737299267,0.398873881556595,0,0,0,0.39752481473341,0.860234595106124,0.347140501607594,0.56530794192401,0,1.10047216776027,0.208994966536811,0.258416759169329,0,0.66944122552934,1.61131726843659,0,0.24406205754817,0.735326160691737,0,1.25019619597712,1.12264686313085,0.337834441449967,0,1.89853131913626,0.916008719652036,0,0,3.48875241714027,0,0.759783069987479,0.264818361626438,3.15520282823695,1.06400514659507,0,1.06748995729705,0.74000264525148,0.933633106199299,2.69421344139376,1.63461903113459,3.02714855289863,1.72852777344,1.40592859100278,1.24864030732128,0.570471821544449,1.19558944441441,5.40198693761318,3.72307772046703,3.37081936085396,1.42907919878425,3.19369225010597,5.3729406211398,3.56400857184616,0.989067717114227,2.73048408581408,5.03032699271367,1.5150250255866,8.00758527180571,0.831192346452549,3.07284334616587,0.612975591598039,1.05166641234618,0.340296549480063,0.179389635688862,0,0,0,0.412210116953756,0.257640540045629,0.37223371266318,0.337552664482532,0.194874010322397,0.504867548488229,0.276149695926898,0.484938170456436,1.42003837006646,0.10075209822764,0.169560592310488,1.54608682530637,1.63647672354501,1.14721838155602,0.731842236777572,0.795178609928912,1.39432731443422,2.90250954043037,2.01856680700503,1.45990943630332,0,0,0,0.928735856063958,4.33127689001751,6.98010120235079,8.42923450390509,6.7483088367375,5.95587452754927,4.79334777003293,4.50814176311084,5.25842101824641,6.27908688401107,7.69494313892781,0.738155454624648,4.20725321410337,1.6462960453256,1.47008711385542,6.33775174109154,4.91413608338813,3.54473944008842,0,2.7057456479485,0.343135620597051,7.35326912237791,1.1240175325762,3.11639814476056,3.33318402570707,1.3032332212413,3.11980435583874,4.3299402607582,0.463721619900307,0.821860859650752,0.577465791044295,0,0.380508304469197,3.95102198979638,3.43394464837949,0.246217006087397,0.234004265139238,1.93220510975347,0,3.02367830757947,1.41775097242386,0.268675568108545,0.290633938513962,2.68367875415648,3.94130590316755,1.40877494421162,0.414656231081544,0.144119953416961,0.12624243342638,1.33345578013555,2.29193055334967,7.03304683260282,5.13217338068116,2.77634230298973,0.600686115687835,9.1464458441785,1.90622843387113,7.41132117016576,0.7333828582095,0.904902010304444,3.57656445851882,0.845302752556,4.25500986535793,2.08014873822732,0.771622122786426,5.67396528093113,1.8649552531127,3.43147184779554,0,8.23240336780769,0.65147236858747,1.77695974371273,0,0,0,0.699810938274399,1.2162378064119,6.02708509718552,4.21667878966063,0.239624855491583,1.14861935834114,0,0.579125226670317,2.05476322550383,0,0.672510863961164,0,0,0.128343036279748,3.04913549066956,2.60279707715243,2.31986643833309,0.335032530668698,0,0,0,0,0.12269149171914,4.00136416847742,2.17012018959788,0.623912584592421,1.60586089917446,0.157702415033935,0.468565659970853,0.601892199455438,31.8370505678379,3.10419213877515,0,0.921845842708516,1.21637060255316,2.34961388955289,3.77457766191941,0,0.215714200818617,0.106727557803444,0.303127571446259,1.66435439510497,1.5119514666484,1.73675465473144,0.306923946576125,1.96462066103151,1.40953064181271,0.511707249066704,0.965123526861645,1.48418066444991,1.69630663182921,0.355123450626254,0.0821271560138091,1.55776328755086,0.348631135379878,1.45031339509947,5.01266175758212,1.19705285616665,0.34444334449382,2.54927635209404,2.36023946926963,1.35359883872224,1.15523005656622,0,0,0.633309773357254,2.27466768141793,1.02056223165909,1.29549549661284,0,1.08378575017541,2.00675909541941,1.27438136522519,0.831076008928724,2.46262230194396,0,0,2.3080511260475,2.29610251989794,1.62689197332152,1.75169719801128,1.28197250745681,0.165018999841176,2.29706215198469,7.15066270640173,0,0,4.62145851343933,5.37262861541453,1.51620229732984,6.1229539574916,11.7463522070525,2.21589231281862,0.178064071293475,0.826424576804891,2.11409074101617,1.27612712494584,0.809262246844399,0.464845549297286,4.40737285562896,0,0.308033580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| |||
|short_description=p7@SCD | |||
}} |
Revision as of 11:17, 10 September 2013
Short description: | p7@SCD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SCD_5end |
Coexpression cluster: | C173_Adipocyte_mature_skin_left_Hepatocyte_Osteoblast_adipose |
Association with transcript: | 310bp_to_ENST00000370355_5end |
EntrezGene: | SCD |
HGNC: | 10571 |
UniProt: | O00767 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.40e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.80e-13 | 223 |
ectoderm-derived structure | 1.56e-11 | 171 |
ectoderm | 1.56e-11 | 171 |
presumptive ectoderm | 1.56e-11 | 171 |
cell layer | 6.55e-11 | 309 |
central nervous system | 1.46e-10 | 81 |
epithelium | 1.46e-10 | 306 |
ecto-epithelium | 3.18e-10 | 104 |
brain | 1.79e-09 | 68 |
future brain | 1.79e-09 | 68 |
neural tube | 2.62e-09 | 56 |
neural rod | 2.62e-09 | 56 |
future spinal cord | 2.62e-09 | 56 |
neural keel | 2.62e-09 | 56 |
nervous system | 3.35e-09 | 89 |
neural plate | 5.30e-09 | 82 |
presumptive neural plate | 5.30e-09 | 82 |
neurectoderm | 3.87e-08 | 86 |
regional part of nervous system | 7.65e-08 | 53 |
regional part of brain | 7.65e-08 | 53 |
larynx | 1.30e-07 | 9 |
structure with developmental contribution from neural crest | 1.76e-07 | 132 |
endoderm-derived structure | 2.55e-07 | 160 |
endoderm | 2.55e-07 | 160 |
presumptive endoderm | 2.55e-07 | 160 |
embryonic structure | 2.66e-07 | 564 |
germ layer | 3.18e-07 | 560 |
germ layer / neural crest | 3.18e-07 | 560 |
embryonic tissue | 3.18e-07 | 560 |
presumptive structure | 3.18e-07 | 560 |
germ layer / neural crest derived structure | 3.18e-07 | 560 |
epiblast (generic) | 3.18e-07 | 560 |
pre-chordal neural plate | 5.11e-07 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.