FFCP PHASE1:Hg19::chr12:7014126..7014191,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10233|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19138|TSSclassifier=S|UniProt=C9JQN5,C9JEW3|association_with_transcript=0bp_to_ENST00000415834,ENST00000436789_5end|coexpression_cluster_id=C111|description=CAGE_peak_3_at_LRRC23_5end|id=chr12:7014126..7014191,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000623;4.98e-08;3|ontology_enrichment_celltype_v019_2=CL:0000623,4.30e-08,3;CL:0000825,4.30e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.08e-19!94;UBERON:0001016!4.08e-19!94;UBERON:0001049!1.12e-18!57;UBERON:0005068!1.12e-18!57;UBERON:0006241!1.12e-18!57;UBERON:0007135!1.12e-18!57;UBERON:0001017!8.95e-18!82;UBERON:0005743!1.13e-17!86;UBERON:0002780!9.13e-16!41;UBERON:0001890!9.13e-16!41;UBERON:0006240!9.13e-16!41;UBERON:0000955!1.14e-15!69;UBERON:0006238!1.14e-15!69;UBERON:0003080!4.57e-15!42;UBERON:0002616!6.48e-15!59;UBERON:0007023!1.06e-13!115;UBERON:0002020!5.61e-13!34;UBERON:0003528!5.61e-13!34;UBERON:0001893!1.59e-12!34;UBERON:0002791!2.77e-12!33;UBERON:0002346!8.33e-12!90;UBERON:0003075!1.17e-11!86;UBERON:0007284!1.17e-11!86;UBERON:0001869!3.03e-11!32;UBERON:0002619!4.44e-10!22;UBERON:0003056!2.17e-09!61;UBERON:0001950!6.86e-09!20;UBERON:0000956!8.79e-09!25;UBERON:0000203!8.79e-09!25|ontology_enrichment_uberon_v019=UBERON:0000073;4.79e-15;53!UBERON:0002616;4.79e-15;53!UBERON:0002780;6.73e-15;41!UBERON:0001890;6.73e-15;41!UBERON:0003528;2.41e-13;34!UBERON:0002020;2.41e-13;34!UBERON:0001893;1.31e-11;34!UBERON:0001017;2.21e-11;75!UBERON:0000955;2.61e-11;68!UBERON:0002791;2.78e-11;32!UBERON:0001894;4.00e-11;7!UBERON:0001869;6.36e-11;32!UBERON:0001871;1.34e-10;6!UBERON:0002298;1.40e-10;6!UBERON:0000369;3.20e-10;4!UBERON:0002435;3.20e-10;4!UBERON:0000204;3.20e-10;4!UBERON:0000125;2.18e-09;9!UBERON:0002308;2.18e-09;9!UBERON:0002420;4.25e-09;9!UBERON:0007245;4.25e-09;9!UBERON:0010009;4.25e-09;9!UBERON:0010011;4.25e-09;9!UBERON:0000454;4.25e-09;9!UBERON:0002619;5.39e-09;22!UBERON:0001896;1.71e-08;3!UBERON:0005290;1.71e-08;3!UBERON:0001950;2.70e-08;20!UBERON:0005383;4.43e-08;3!UBERON:0005382;4.43e-08;3!UBERON:0001016;6.95e-08;83!UBERON:0000956;1.07e-07;25!UBERON:0000203;1.07e-07;25!UBERON:0000349;1.63e-07;5!UBERON:0007023;2.03e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.15e-23,56;UBERON:0005068,1.15e-23,56;UBERON:0006241,1.15e-23,56;UBERON:0007135,1.15e-23,56;UBERON:0000073,1.99e-23,53;UBERON:0002616,1.99e-23,53;UBERON:0000955,7.17e-21,68;UBERON:0006238,7.17e-21,68;UBERON:0001017,1.56e-20,81;UBERON:0002780,8.43e-20,41;UBERON:0001890,8.43e-20,41;UBERON:0003080,8.43e-20,41;UBERON:0006240,8.43e-20,41;UBERON:0007023,2.01e-19,114;UBERON:0001016,6.31e-19,89;UBERON:0002346,4.45e-15,86;UBERON:0003075,5.28e-15,82;UBERON:0007284,5.28e-15,82;UBERON:0003528,3.28e-14,34;UBERON:0002020,3.28e-14,34;UBERON:0003056,9.34e-13,61;UBERON:0001893,2.30e-12,34;UBERON:0010371,3.50e-12,104;UBERON:0002791,1.96e-11,32;UBERON:0001869,1.96e-11,32;UBERON:0001894,5.29e-11,7;UBERON:0006222,5.29e-11,7;UBERON:0002298,1.33e-10,6;UBERON:0001871,1.35e-10,6;UBERON:0000369,3.38e-10,4;UBERON:0002435,3.38e-10,4;UBERON:0000204,3.38e-10,4;UBERON:0010082,3.38e-10,4;UBERON:0000125,2.13e-09,9;UBERON:0002308,2.13e-09,9;UBERON:0002420,3.59e-09,9;UBERON:0007245,3.59e-09,9;UBERON:0010009,3.59e-09,9;UBERON:0010011,3.59e-09,9;UBERON:0000454,3.59e-09,9;UBERON:0002619,6.27e-09,22;UBERON:0001896,1.77e-08,3;UBERON:0005290,1.77e-08,3;UBERON:0010096,1.77e-08,3;UBERON:0001950,3.58e-08,20;UBERON:0005383,4.51e-08,3;UBERON:0005382,4.51e-08,3;UBERON:0010314,5.07e-08,132;UBERON:0004121,9.29e-08,171;UBERON:0000924,9.29e-08,171;UBERON:0006601,9.29e-08,171;UBERON:0000349,1.02e-07,5;UBERON:0000956,1.22e-07,25;UBERON:0000203,1.22e-07,25;UBERON:0011216,2.75e-07,223|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,2.75354993794233,1.15148819429164,0.77408061658038,0,0,0,0.0774672005803016,0,0.880801318004542,0.553995408531877,0.802177789880567,1.51907609501096,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0.464858073811369,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,2.84606484554724,1.17447437874188,0.382273228125229,1.32171328579026,0.560508562981536,0.790152254325231,3.14735632182133,1.57204305099666,4.5232329779892,0,0.977766799900771,1.4203434172042,1.94826728407911,0.334231370655521,0.294605907474837,0.443067789167242,0.541607727530031,0,0.260118695119756,0,0,0,1.03800594213442,0.802622484269139,0,0.339928028092699,0,1.37450978193052,1.77113784413652,0,0,0,0,0,0,0.236777252044017,0,2.62088766192152,1.87208137048455,3.47578569318718,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0.094534817164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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10233 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19138 | |||
|TSSclassifier=S | |||
|UniProt=C9JQN5,C9JEW3 | |||
|association_with_transcript=0bp_to_ENST00000415834,ENST00000436789_5end | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_3_at_LRRC23_5end | |||
|id=chr12:7014126..7014191,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.98e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.30e-08,3;CL:0000825,4.30e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;4.79e-15;53!UBERON:0002616;4.79e-15;53!UBERON:0002780;6.73e-15;41!UBERON:0001890;6.73e-15;41!UBERON:0003528;2.41e-13;34!UBERON:0002020;2.41e-13;34!UBERON:0001893;1.31e-11;34!UBERON:0001017;2.21e-11;75!UBERON:0000955;2.61e-11;68!UBERON:0002791;2.78e-11;32!UBERON:0001894;4.00e-11;7!UBERON:0001869;6.36e-11;32!UBERON:0001871;1.34e-10;6!UBERON:0002298;1.40e-10;6!UBERON:0000369;3.20e-10;4!UBERON:0002435;3.20e-10;4!UBERON:0000204;3.20e-10;4!UBERON:0000125;2.18e-09;9!UBERON:0002308;2.18e-09;9!UBERON:0002420;4.25e-09;9!UBERON:0007245;4.25e-09;9!UBERON:0010009;4.25e-09;9!UBERON:0010011;4.25e-09;9!UBERON:0000454;4.25e-09;9!UBERON:0002619;5.39e-09;22!UBERON:0001896;1.71e-08;3!UBERON:0005290;1.71e-08;3!UBERON:0001950;2.70e-08;20!UBERON:0005383;4.43e-08;3!UBERON:0005382;4.43e-08;3!UBERON:0001016;6.95e-08;83!UBERON:0000956;1.07e-07;25!UBERON:0000203;1.07e-07;25!UBERON:0000349;1.63e-07;5!UBERON:0007023;2.03e-07;114 | |||
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| |||
|short_description=p3@LRRC23 | |||
}} |
Revision as of 00:14, 11 September 2013
Short description: | p3@LRRC23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LRRC23_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000415834, ENST00000436789_5end |
EntrezGene: | LRRC23 |
HGNC: | 19138 |
UniProt: | C9JQN5C9JEW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 4.30e-08 | 3 |
pro-NK cell | 4.30e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.