FFCP PHASE1:Hg19::chr1:239549963..239549974,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1131|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1952|TSSclassifier=S|UniProt=|association_with_transcript=98bp_to_ENST00000468573,uc001hyo.1_5end|coexpression_cluster_id=C1067|description=CAGE_peak_6_at_CHRM3_5end|id=chr1:239549963..239549974,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0000358;3.79e-08;1!UBERON:0006298;1.00e-07;1!UBERON:0004874;1.00e-07;1!UBERON:0006601;5.64e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;3.79e-08;1!DOID:4549;3.79e-08;1!DOID:5861;3.79e-08;1!DOID:6496;3.79e-08;1|ontology_enrichment_disease_v019_2=DOID:3371,3.55e-08,1;DOID:4549,3.55e-08,1;DOID:5861,3.55e-08,1;DOID:6496,3.55e-08,1|ontology_enrichment_uberon=UBERON:0007023!1.73e-46!115;UBERON:0002619!4.24e-36!22;UBERON:0001950!1.16e-32!20;UBERON:0003080!2.46e-31!42;UBERON:0000956!4.69e-31!25;UBERON:0000203!4.69e-31!25;UBERON:0001893!2.04e-30!34;UBERON:0001869!2.69e-30!32;UBERON:0002780!6.29e-30!41;UBERON:0001890!6.29e-30!41;UBERON:0006240!6.29e-30!41;UBERON:0002791!6.87e-29!33;UBERON:0001017!6.62e-28!82;UBERON:0002020!8.32e-28!34;UBERON:0003528!8.32e-28!34;UBERON:0005743!1.20e-27!86;UBERON:0001049!2.63e-27!57;UBERON:0005068!2.63e-27!57;UBERON:0006241!2.63e-27!57;UBERON:0007135!2.63e-27!57;UBERON:0000955!1.15e-26!69;UBERON:0006238!1.15e-26!69;UBERON:0002616!4.99e-26!59;UBERON:0000073!3.05e-25!94;UBERON:0001016!3.05e-25!94;UBERON:0003056!9.32e-22!61;UBERON:0003075!9.92e-21!86;UBERON:0007284!9.92e-21!86;UBERON:0002346!2.71e-19!90;UBERON:0000153!5.74e-19!129;UBERON:0007811!5.74e-19!129;UBERON:0000033!1.37e-18!123;UBERON:0004121!2.46e-14!169;UBERON:0000924!1.11e-13!173;UBERON:0006601!1.11e-13!173;UBERON:0000200!6.07e-12!6;UBERON:0001871!9.43e-12!7;UBERON:0000481!1.52e-11!347;UBERON:0000349!2.31e-10!5;UBERON:0001872!1.30e-09!5;UBERON:0002021!1.33e-09!5;UBERON:0000922!7.78e-09!612;UBERON:0000062!1.02e-07!511;UBERON:0004111!3.48e-07!241;UBERON:0000923!4.86e-07!604;UBERON:0005291!4.86e-07!604;UBERON:0006598!4.86e-07!604;UBERON:0002532!4.86e-07!604;UBERON:0002771!4.92e-07!3;UBERON:0002050!5.49e-07!605;UBERON:0005423!5.49e-07!605;UBERON:0000477!6.97e-07!286|ontology_enrichment_uberon_v019=UBERON:0002619;2.15e-52;22!UBERON:0000956;4.89e-46;25!UBERON:0000203;4.89e-46;25!UBERON:0001950;2.71e-42;20!UBERON:0001869;3.40e-40;32!UBERON:0001893;1.97e-38;34!UBERON:0002791;1.29e-35;32!UBERON:0003528;1.75e-34;34!UBERON:0002020;1.75e-34;34!UBERON:0000349;3.88e-32;5!UBERON:0000200;4.10e-27;6!UBERON:0002780;4.17e-25;41!UBERON:0001890;4.17e-25;41!UBERON:0001871;3.15e-23;6!UBERON:0000073;3.19e-15;53!UBERON:0002616;3.19e-15;53!UBERON:0002771;3.53e-14;2!UBERON:0001876;3.53e-14;2!UBERON:0001954;9.14e-14;2!UBERON:0003022;9.14e-14;2!UBERON:0002421;9.14e-14;2!UBERON:0002600;9.14e-14;2!UBERON:0001870;9.48e-10;3!UBERON:0000955;3.79e-09;68!UBERON:0001017;6.84e-09;75!UBERON:0001000;3.79e-08;1!UBERON:0005352;3.79e-08;1!UBERON:0002581;1.00e-07;1!UBERON:0001882;1.00e-07;1!UBERON:0002022;1.00e-07;1!UBERON:0000989;1.00e-07;1!UBERON:0001736;1.00e-07;1!UBERON:0008811;1.00e-07;1!UBERON:0007190;1.00e-07;1!UBERON:0005403;1.00e-07;1!UBERON:0001016;4.56e-07;83!UBERON:0002420;4.69e-07;9!UBERON:0007245;4.69e-07;9!UBERON:0010009;4.69e-07;9!UBERON:0010011;4.69e-07;9!UBERON:0000454;4.69e-07;9!UBERON:0007023;5.53e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.08e-52,22;UBERON:0001869,6.89e-47,32;UBERON:0000956,2.65e-46,25;UBERON:0000203,2.65e-46,25;UBERON:0001893,4.99e-44,34;UBERON:0001950,1.26e-42,20;UBERON:0002791,3.09e-41,32;UBERON:0003528,1.04e-38,34;UBERON:0002020,1.04e-38,34;UBERON:0002780,3.68e-36,41;UBERON:0001890,3.68e-36,41;UBERON:0003080,3.68e-36,41;UBERON:0006240,3.68e-36,41;UBERON:0000349,2.83e-32,5;UBERON:0000073,2.05e-27,53;UBERON:0002616,2.05e-27,53;UBERON:0000200,7.70e-27,6;UBERON:0003056,1.33e-26,61;UBERON:0001049,8.39e-26,56;UBERON:0005068,8.39e-26,56;UBERON:0006241,8.39e-26,56;UBERON:0007135,8.39e-26,56;UBERON:0001871,1.41e-23,6;UBERON:0000955,3.43e-23,68;UBERON:0006238,3.43e-23,68;UBERON:0001017,5.07e-19,81;UBERON:0003075,5.26e-19,82;UBERON:0007284,5.26e-19,82;UBERON:0007023,1.01e-18,114;UBERON:0002346,5.66e-18,86;UBERON:0001016,7.96e-17,89;UBERON:0001876,1.44e-14,2;UBERON:0010371,2.63e-14,104;UBERON:0002771,2.63e-14,2;UBERON:0001954,1.11e-13,2;UBERON:0003022,1.11e-13,2;UBERON:0002421,1.11e-13,2;UBERON:0002600,1.11e-13,2;UBERON:0010314,4.52e-12,132;UBERON:0001870,1.16e-09,3;UBERON:0004121,1.52e-09,171;UBERON:0000924,1.52e-09,171;UBERON:0006601,1.52e-09,171;UBERON:0011216,2.11e-08,223;UBERON:0001000,3.32e-08,1;UBERON:0005352,3.32e-08,1;UBERON:0001736,5.70e-08,1;UBERON:0006298,5.70e-08,1;UBERON:0000989,8.51e-08,1;UBERON:0008811,8.51e-08,1;UBERON:0006258,8.51e-08,1;UBERON:0005876,8.51e-08,1;UBERON:0004874,8.51e-08,1;UBERON:0002022,9.10e-08,1;UBERON:0002581,1.26e-07,1;UBERON:0001882,1.44e-07,1;UBERON:0005403,1.44e-07,1;UBERON:0007190,1.99e-07,1;UBERON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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1131 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1952 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=98bp_to_ENST00000468573,uc001hyo.1_5end | |||
|coexpression_cluster_id=C1067 | |||
|description=CAGE_peak_6_at_CHRM3_5end | |||
|id=chr1:239549963..239549974,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.79e-08;1!UBERON:0006298;1.00e-07;1!UBERON:0004874;1.00e-07;1!UBERON:0006601;5.64e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;3.79e-08;1!DOID:4549;3.79e-08;1!DOID:5861;3.79e-08;1!DOID:6496;3.79e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.55e-08,1;DOID:4549,3.55e-08,1;DOID:5861,3.55e-08,1;DOID:6496,3.55e-08,1 | |||
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|short_description=p6@CHRM3 | |||
}} |
Revision as of 04:30, 12 September 2013
Short description: | p6@CHRM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_CHRM3_5end |
Coexpression cluster: | C1067_ductus_salivary_smooth_submaxillary_medial_parotid_seminal |
Association with transcript: | 98bp_to_ENST00000468573, uc001hyo.1_5end |
EntrezGene: | CHRM3 |
HGNC: | 1952 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.55e-08 | 1 |
extraosseous chondrosarcoma | 3.55e-08 | 1 |
myxoid chondrosarcoma | 3.55e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 3.55e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.