FFCP PHASE1:Mm9::chr11:119409058..119409073,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18164|HGNC=|MCL_coexpression_id=39|UniProt=Q62443|association_with_transcript=0bp_to_ENSMUST00000026670_5end|description=CAGE_peak_1_at_Nptx1_5end|id=chr11:119409058..119409073,-|ontology_enrichment_celltype=CL:0000117!2.05e-12!23;CL:0000337!2.05e-12!23;CL:0000540!5.84e-07!33;CL:0000047!5.84e-07!33;CL:0000031!5.84e-07!33;CL:0000404!5.84e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.99e-19,23;CL:0000337,6.99e-19,23;CL:0000540,2.85e-11,33;CL:0000047,2.85e-11,33;CL:0000031,2.85e-11,33;CL:0000404,2.85e-11,33;CL:0000393,8.72e-11,39;CL:0000211,8.72e-11,39;CL:0000221,6.29e-10,44;CL:0000133,6.29e-10,44;CL:0002319,2.39e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.46e-28!71;UBERON:0003075!1.46e-28!71;UBERON:0007284!1.46e-28!71;UBERON:0000033!4.75e-26!63;UBERON:0001049!9.97e-26!52;UBERON:0005068!9.97e-26!52;UBERON:0006241!9.97e-26!52;UBERON:0007135!9.97e-26!52;UBERON:0004121!1.16e-24!102;UBERON:0000924!1.16e-24!102;UBERON:0006601!1.16e-24!102;UBERON:0000955!2.18e-24!50;UBERON:0006238!2.18e-24!50;UBERON:0002616!9.58e-24!49;UBERON:0003056!6.18e-23!49;UBERON:0000073!1.14e-22!75;UBERON:0001016!1.14e-22!75;UBERON:0001017!1.95e-21!73;UBERON:0005743!1.95e-21!73;UBERON:0003080!4.92e-20!40;UBERON:0002780!2.34e-19!39;UBERON:0001890!2.34e-19!39;UBERON:0006240!2.34e-19!39;UBERON:0002020!8.58e-18!34;UBERON:0002791!9.05e-15!29;UBERON:0003528!9.05e-15!29;UBERON:0001893!9.05e-15!29;UBERON:0007811!4.04e-14!86;UBERON:0000153!3.17e-13!94;UBERON:0000956!1.10e-10!21;UBERON:0001869!1.10e-10!21;UBERON:0000203!1.10e-10!21;UBERON:0000025!4.34e-09!114;UBERON:0002619!1.14e-08!17;UBERON:0002021!1.83e-08!10;UBERON:0000411!1.83e-08!10;UBERON:0001950!1.83e-08!10;UBERON:0004111!5.29e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.83e-44,54;UBERON:0001049,4.56e-42,52;UBERON:0005068,4.56e-42,52;UBERON:0006241,4.56e-42,52;UBERON:0007135,4.56e-42,52;UBERON:0001016,5.62e-40,75;UBERON:0002346,6.69e-40,64;UBERON:0003075,6.69e-40,64;UBERON:0007284,6.69e-40,64;UBERON:0001017,1.05e-37,73;UBERON:0004121,2.26e-36,95;UBERON:0000924,2.26e-36,95;UBERON:0006601,2.26e-36,95;UBERON:0000955,6.26e-36,47;UBERON:0006238,6.26e-36,47;UBERON:0002616,8.62e-35,46;UBERON:0010371,1.26e-34,73;UBERON:0003056,6.19e-32,49;UBERON:0003080,1.38e-31,40;UBERON:0002780,2.29e-30,39;UBERON:0001890,2.29e-30,39;UBERON:0006240,2.29e-30,39;UBERON:0002020,9.29e-29,34;UBERON:0010314,1.97e-25,92;UBERON:0003528,2.91e-23,29;UBERON:0002791,2.91e-23,29;UBERON:0001893,2.91e-23,29;UBERON:0000025,1.27e-17,114;UBERON:0004111,2.38e-16,122;UBERON:0000956,7.65e-16,21;UBERON:0001869,7.65e-16,21;UBERON:0000203,7.65e-16,21;UBERON:0002021,2.89e-14,10;UBERON:0000411,2.89e-14,10;UBERON:0001950,2.89e-14,10;UBERON:0002619,3.24e-12,17;UBERON:0003076,2.66e-10,12;UBERON:0003057,2.66e-10,12;UBERON:0000119,9.80e-10,176;UBERON:0000483,1.78e-09,174;UBERON:0002420,1.35e-08,8;UBERON:0007245,1.35e-08,8;UBERON:0010009,1.35e-08,8;UBERON:0010011,1.35e-08,8;UBERON:0000454,1.35e-08,8;UBERON:0011216,4.85e-08,194;UBERON:0002240,6.00e-08,6;UBERON:0005174,6.00e-08,6;UBERON:0001137,6.00e-08,6;UBERON:0001894,7.94e-08,10;UBERON:0006222,7.94e-08,10|phase1_expression=0.320297694209588,0,0,0.90739263392049,0.500895729946347,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,7.90902598404949,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,2.26614272356039,3.14268486780495,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,2.83243045203437,2.64495489636016,5.70448263155561,1.0165335962074,0.889294796111139,0,0,0,0,0.384218305321555,2.38486108309499,1.62007125998029,2.73422449756797,8.2838785477103,6.84692476950002,0.489963196859816,0.575072826109418,1.83843757322004,5.50579404996943,15.3224805702225,12.1349161272432,1.58263545276233,3.01909223887952,2.08365348222704,12.2840519560608,3.93933827022176,14.3630352910202,8.54422897873636,6.83384067835694,8.01517617048792,8.93569081331572,3.47629176491213,0.579728977403356,0,0,0,0,0,1.54488862144927,0,0,0,1.83096445709685,0,0,0,0.432982082022428,0,0,1.25602267690966,0,0.742210695324124,1.21439728736295,0.304465478312141,0.691846491768175,0.753613202763113,0.705532242814229,0.376999773989026,0,0,0,0,0,0,0,47.1377083188591,84.6164695526358,0.510914110417183,0.11981512450592,0,0,11.3840885947665,8.23501085073528,1.13088916901578,30.0716073932638,32.475863080952,4.36354893575076,9.73447578406546,0.101839363850316,0.995255764880744,2.77995034277042,0.631325567659422,0.260240885925407,0.689706313300419,1.26043490863744,0.90422890701429,2.65342346690179,1.92170580427275,2.15513966487376,2.32833033665114,0,0.378212160335639,0.351902248327898,0.43839146485515,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.329119699826961,0,0,0.146199987425332,0.219550115291051,0,46.8946585298004,5.35103984372279,0,0.793351699990633,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0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| ||
|EntrezGene=18164 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt=Q62443 | |||
|association_with_transcript=0bp_to_ENSMUST00000026670_5end | |||
|description=CAGE_peak_1_at_Nptx1_5end | |||
|id=chr11:119409058..119409073,- | |||
|ontology_enrichment_celltype=CL:0000117!2.05e-12!23;CL:0000337!2.05e-12!23;CL:0000540!5.84e-07!33;CL:0000047!5.84e-07!33;CL:0000031!5.84e-07!33;CL:0000404!5.84e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.99e-19,23;CL:0000337,6.99e-19,23;CL:0000540,2.85e-11,33;CL:0000047,2.85e-11,33;CL:0000031,2.85e-11,33;CL:0000404,2.85e-11,33;CL:0000393,8.72e-11,39;CL:0000211,8.72e-11,39;CL:0000221,6.29e-10,44;CL:0000133,6.29e-10,44;CL:0002319,2.39e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.46e-28!71;UBERON:0003075!1.46e-28!71;UBERON:0007284!1.46e-28!71;UBERON:0000033!4.75e-26!63;UBERON:0001049!9.97e-26!52;UBERON:0005068!9.97e-26!52;UBERON:0006241!9.97e-26!52;UBERON:0007135!9.97e-26!52;UBERON:0004121!1.16e-24!102;UBERON:0000924!1.16e-24!102;UBERON:0006601!1.16e-24!102;UBERON:0000955!2.18e-24!50;UBERON:0006238!2.18e-24!50;UBERON:0002616!9.58e-24!49;UBERON:0003056!6.18e-23!49;UBERON:0000073!1.14e-22!75;UBERON:0001016!1.14e-22!75;UBERON:0001017!1.95e-21!73;UBERON:0005743!1.95e-21!73;UBERON:0003080!4.92e-20!40;UBERON:0002780!2.34e-19!39;UBERON:0001890!2.34e-19!39;UBERON:0006240!2.34e-19!39;UBERON:0002020!8.58e-18!34;UBERON:0002791!9.05e-15!29;UBERON:0003528!9.05e-15!29;UBERON:0001893!9.05e-15!29;UBERON:0007811!4.04e-14!86;UBERON:0000153!3.17e-13!94;UBERON:0000956!1.10e-10!21;UBERON:0001869!1.10e-10!21;UBERON:0000203!1.10e-10!21;UBERON:0000025!4.34e-09!114;UBERON:0002619!1.14e-08!17;UBERON:0002021!1.83e-08!10;UBERON:0000411!1.83e-08!10;UBERON:0001950!1.83e-08!10;UBERON:0004111!5.29e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.83e-44,54;UBERON:0001049,4.56e-42,52;UBERON:0005068,4.56e-42,52;UBERON:0006241,4.56e-42,52;UBERON:0007135,4.56e-42,52;UBERON:0001016,5.62e-40,75;UBERON:0002346,6.69e-40,64;UBERON:0003075,6.69e-40,64;UBERON:0007284,6.69e-40,64;UBERON:0001017,1.05e-37,73;UBERON:0004121,2.26e-36,95;UBERON:0000924,2.26e-36,95;UBERON:0006601,2.26e-36,95;UBERON:0000955,6.26e-36,47;UBERON:0006238,6.26e-36,47;UBERON:0002616,8.62e-35,46;UBERON:0010371,1.26e-34,73;UBERON:0003056,6.19e-32,49;UBERON:0003080,1.38e-31,40;UBERON:0002780,2.29e-30,39;UBERON:0001890,2.29e-30,39;UBERON:0006240,2.29e-30,39;UBERON:0002020,9.29e-29,34;UBERON:0010314,1.97e-25,92;UBERON:0003528,2.91e-23,29;UBERON:0002791,2.91e-23,29;UBERON:0001893,2.91e-23,29;UBERON:0000025,1.27e-17,114;UBERON:0004111,2.38e-16,122;UBERON:0000956,7.65e-16,21;UBERON:0001869,7.65e-16,21;UBERON:0000203,7.65e-16,21;UBERON:0002021,2.89e-14,10;UBERON:0000411,2.89e-14,10;UBERON:0001950,2.89e-14,10;UBERON:0002619,3.24e-12,17;UBERON:0003076,2.66e-10,12;UBERON:0003057,2.66e-10,12;UBERON:0000119,9.80e-10,176;UBERON:0000483,1.78e-09,174;UBERON:0002420,1.35e-08,8;UBERON:0007245,1.35e-08,8;UBERON:0010009,1.35e-08,8;UBERON:0010011,1.35e-08,8;UBERON:0000454,1.35e-08,8;UBERON:0011216,4.85e-08,194;UBERON:0002240,6.00e-08,6;UBERON:0005174,6.00e-08,6;UBERON:0001137,6.00e-08,6;UBERON:0001894,7.94e-08,10;UBERON:0006222,7.94e-08,10 | |||
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|short_description=p1@Nptx1 | |||
}} |
Revision as of 19:03, 12 September 2013
Short description: | p1@Nptx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nptx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 0bp_to_ENSMUST00000026670_5end |
EntrezGene: | Nptx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.99e-19 | 23 |
neuroblast (sensu Vertebrata) | 6.99e-19 | 23 |
neuron | 2.85e-11 | 33 |
neuronal stem cell | 2.85e-11 | 33 |
neuroblast | 2.85e-11 | 33 |
electrically signaling cell | 2.85e-11 | 33 |
electrically responsive cell | 8.72e-11 | 39 |
electrically active cell | 8.72e-11 | 39 |
ectodermal cell | 6.29e-10 | 44 |
neurectodermal cell | 6.29e-10 | 44 |
neural cell | 2.39e-09 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.