FFCP PHASE1:Mm9::chr14:70930626..70930654,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=213469|HGNC=|MCL_coexpression_id=1589|UniProt=Q8K406,Q3V1R3|association_with_transcript=0bp_to_ENSMUST00000047331,NM_145219,uc007uog.2,uc007uoh.2_5end|description=CAGE_peak_2_at_Lgi3_5end|id=chr14:70930626..70930654,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.53e-17!73;UBERON:0005743!9.53e-17!73;UBERON:0000073!3.48e-16!75;UBERON:0001016!3.48e-16!75;UBERON:0002346!2.57e-15!71;UBERON:0003075!2.57e-15!71;UBERON:0007284!2.57e-15!71;UBERON:0001049!1.10e-14!52;UBERON:0005068!1.10e-14!52;UBERON:0006241!1.10e-14!52;UBERON:0007135!1.10e-14!52;UBERON:0004121!2.04e-14!102;UBERON:0000924!2.04e-14!102;UBERON:0006601!2.04e-14!102;UBERON:0000955!1.49e-13!50;UBERON:0006238!1.49e-13!50;UBERON:0002616!3.98e-13!49;UBERON:0000025!7.87e-13!114;UBERON:0004111!1.79e-12!122;UBERON:0000033!2.21e-11!63;UBERON:0002048!1.66e-09!14;UBERON:0000117!1.66e-09!14;UBERON:0000171!1.66e-09!14;UBERON:0000170!1.66e-09!14;UBERON:0005597!1.66e-09!14;UBERON:0000118!1.66e-09!14;UBERON:0000468!4.34e-09!333;UBERON:0003080!4.71e-09!40;UBERON:0005157!6.89e-09!27;UBERON:0002780!1.61e-08!39;UBERON:0001890!1.61e-08!39;UBERON:0006240!1.61e-08!39;UBERON:0002020!2.25e-08!34;UBERON:0003056!6.52e-08!49;UBERON:0005153!2.49e-07!17;UBERON:0003076!3.75e-07!12;UBERON:0003057!3.75e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.19e-15,73;UBERON:0000073,7.38e-15,54;UBERON:0001016,1.28e-14,75;UBERON:0001049,1.04e-13,52;UBERON:0005068,1.04e-13,52;UBERON:0006241,1.04e-13,52;UBERON:0007135,1.04e-13,52;UBERON:0000025,1.21e-12,114;UBERON:0010314,1.40e-12,92;UBERON:0004111,1.58e-12,122;UBERON:0002048,8.53e-11,14;UBERON:0000117,8.53e-11,14;UBERON:0000171,8.53e-11,14;UBERON:0000170,8.53e-11,14;UBERON:0005597,8.53e-11,14;UBERON:0000118,8.53e-11,14;UBERON:0000955,9.81e-11,47;UBERON:0006238,9.81e-11,47;UBERON:0002346,1.48e-10,64;UBERON:0003075,1.48e-10,64;UBERON:0007284,1.48e-10,64;UBERON:0002616,2.73e-10,46;UBERON:0004121,5.73e-09,95;UBERON:0000924,5.73e-09,95;UBERON:0006601,5.73e-09,95;UBERON:0005153,2.40e-08,17;UBERON:0010371,3.45e-08,73;UBERON:0003080,5.12e-08,40;UBERON:0005178,1.10e-07,17;UBERON:0005181,1.10e-07,17;UBERON:0002224,1.10e-07,17;UBERON:0000915,1.10e-07,17;UBERON:0008947,1.10e-07,17;UBERON:0003258,1.10e-07,17;UBERON:0002020,1.45e-07,34;UBERON:0003076,1.68e-07,12;UBERON:0003057,1.68e-07,12;UBERON:0002780,1.85e-07,39;UBERON:0001890,1.85e-07,39;UBERON:0006240,1.85e-07,39;UBERON:0005157,2.50e-07,20;UBERON:0002021,3.94e-07,10;UBERON:0000411,3.94e-07,10;UBERON:0001950,3.94e-07,10|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,7.19483016055474,6.59058548203415,2.72201858703997,3.77963338388479,2.87505128729943,0,0,0,0,0.286533439938757,0.515672092277442,1.21389876515759,2.64495489636016,2.53532561402472,0,0,0,0,0,4.19440154725767,10.7581125490035,0.207379224616955,0.270011876663381,0.420649922702764,40.2767888009363,31.8050698970323,0.122490799214954,0.191690942036473,0.919218786610021,22.0231761998777,37.5400773970452,33.6398307831173,0.659431438650969,1.28082701043374,1.04182674111352,45.2276458382237,37.7050948721226,38.0467636964257,15.9099436155781,18.7930618654816,5.96478226640962,0.151452386666368,0.906858721281426,0.289864488701678,0.860423876981386,0,0,0,0,1.40444420131752,0,0,0,1.97180787687353,0,0,0,0,0,0,1.37020655662872,0,5.04703272820404,2.94925055502431,3.04465478312141,4.84292544237723,4.06951129492081,4.23319345688537,4.77533047052767,0.247194967734374,0.578397427679647,0,0.485300549842228,0.662524555381181,0,0,24.8863677459815,32.8831329697124,0.255457055208591,0,0,0,43.4392854273986,20.5875271268382,0.753926112677186,15.1227158567281,19.6900902144355,45.9211578476628,47.6989313419207,3.1570202793598,2.23932547098167,3.53811861807145,1.05220927943237,0.520481771850815,0.459804208866946,0,0.90422890701429,0.680364991513279,1.2811372028485,0.937017245597288,6.46758426847539,0.431135985865684,0.756424320671277,1.58356011747554,3.72632745126877,0.834141747676794,0.696504333044333,0.61734640922383,3.58261680273288,0,0,0,0.621377317606506,1.17263029990548,1.62055855314913,1.65721314909647,2.95146347621106,3.39387648352232,1.86027155800326,1.60964040839772,1.16765342367169,1.81015834904829,1.14917224855367,0.648550476366846,1.02339991197733,1.97595103761946,1.47627060636409,20.8187049078486,0.411618449517138,0,1.05780226665418,0.639864751605702,1.62565670302307,0.902072229254653,1.21010114774006,0.444756087689741,0,0.949058123089023,0.823494773620054,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.648414149624083,0.199141273254367,1.13800740571849,1.48523066392647,1.1270773567308,0.814605311381257,0.775809948670503,0.631222379012867,1.07502113111237,0.295220295959204,0.156998727841375,0.123397163921801,0,0.83422552858047,0,0.224862112384854,0.202860121388503,0.241177159752417,1.78238096246994,3.74004978686054,0,0,0,2.60498663367952,0.624075346229121,0.252578877947112,0,0,36.5811316529877,3.97931964718018,6.19266910479698,7.29903868833309,15.9589368836181,39.6989830137103,75.2217905199803,43.5148034722891,37.6747994413796,43.4070791711599,44.6473352240964,43.5876417143863,45.0707802669987,52.7969063822517,0,0,0,0.275936746304732,60.206471245422,76.7736547178931,0,0.504941854408746,0.315508219416257,1.17131623288992,1.29254038639679,0.955875191810208,1.33679204449436,1.69845918473299,0,0.876767573733936,0,6.10510501201433,1.27746076687442,2.49291845134157,1.62886959353576,2.14461159864296,1.32745138339963,1.21390318077491,1.51161778482376,0.754420319023592,0.295301892880773,0.614870295887855,0,0.363533729477506,0.356497378384721,0.632073515871632,1.05418608574999,0,1.36175842301515,0.900305470156551,1.16422815404479,1.92903331528433,2.83744373827638,6.0645397984704,6.08831376227848,10.0473433207818,0,0,1.10264199027481,0.65954501176592,0.968786560175433,0.72375509913787,0.119372344003136,0,0.582961673259701,68.9782123479096,0.341741761595705,3.92135049130123,1.48155621895769,0.376736914009382,0,0.228778173206523,0,0,0,0,1.58167996790568,1.01659733563424,1.18805874903981,2.92723614420256,0.655087691238533,1.48350781023303,1.90102948168273,1.04702376793612,0.388844919875379,0,0,2.24274819065968,1.98550188548517,3.69457257853691,2.58319646955462,1.35164900392623,1.64300134104056,1.3020438484395,0.838874755405687,0,0.576060012515731,0,0.202725215290164,0.410843828659309,0.129920822977795,0.358053391334963,0,0,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0.443971906748129,0,0.167884616364078,1.9318959403219,0.93841237725591,0.183151624267265,0,3.00943262421218,16.942555278512,13.3494318587081,12.0308057822273,10.3111909406213,29.4585483501376,20.3956352295219,20.925697507186,11.7083512838297,11.3285602246051,13.4617681055473,0,1.19707462020309,0.853668028770671,0.972426868273176,0.838452650511929,0.735374033800057,3.77819437262746,3.29656091582231,2.24643446714271,3.28506375292937,3.04175159868288,4.52703219326583,2.90288673156635,4.22566005872137,3.0440798546475,2.38146845641537,2.43357084484197,3.6652751888104,1.64834360321323,4.56316652416632,3.08582327146874,3.37204031702741,3.33810665926249,1.88950341622027,3.10560955370591,3.89227196301712,2.56099162021882,3.15683653725411,2.71608227691724,2.24456908663095,3.44041552560105,3.05363895364247,3.6830793885272,2.78886314134739,1.54325288784913,0.749431733813838,5.38042699424439,3.22306581072447,0.956441660344217,2.20591419119516,1.85494268496337|short_description=p2@Lgi3}} | ||
|EntrezGene=213469 | |||
|HGNC= | |||
|MCL_coexpression_id=1589 | |||
|UniProt=Q8K406,Q3V1R3 | |||
|association_with_transcript=0bp_to_ENSMUST00000047331,NM_145219,uc007uog.2,uc007uoh.2_5end | |||
|description=CAGE_peak_2_at_Lgi3_5end | |||
|id=chr14:70930626..70930654,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.53e-17!73;UBERON:0005743!9.53e-17!73;UBERON:0000073!3.48e-16!75;UBERON:0001016!3.48e-16!75;UBERON:0002346!2.57e-15!71;UBERON:0003075!2.57e-15!71;UBERON:0007284!2.57e-15!71;UBERON:0001049!1.10e-14!52;UBERON:0005068!1.10e-14!52;UBERON:0006241!1.10e-14!52;UBERON:0007135!1.10e-14!52;UBERON:0004121!2.04e-14!102;UBERON:0000924!2.04e-14!102;UBERON:0006601!2.04e-14!102;UBERON:0000955!1.49e-13!50;UBERON:0006238!1.49e-13!50;UBERON:0002616!3.98e-13!49;UBERON:0000025!7.87e-13!114;UBERON:0004111!1.79e-12!122;UBERON:0000033!2.21e-11!63;UBERON:0002048!1.66e-09!14;UBERON:0000117!1.66e-09!14;UBERON:0000171!1.66e-09!14;UBERON:0000170!1.66e-09!14;UBERON:0005597!1.66e-09!14;UBERON:0000118!1.66e-09!14;UBERON:0000468!4.34e-09!333;UBERON:0003080!4.71e-09!40;UBERON:0005157!6.89e-09!27;UBERON:0002780!1.61e-08!39;UBERON:0001890!1.61e-08!39;UBERON:0006240!1.61e-08!39;UBERON:0002020!2.25e-08!34;UBERON:0003056!6.52e-08!49;UBERON:0005153!2.49e-07!17;UBERON:0003076!3.75e-07!12;UBERON:0003057!3.75e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.19e-15,73;UBERON:0000073,7.38e-15,54;UBERON:0001016,1.28e-14,75;UBERON:0001049,1.04e-13,52;UBERON:0005068,1.04e-13,52;UBERON:0006241,1.04e-13,52;UBERON:0007135,1.04e-13,52;UBERON:0000025,1.21e-12,114;UBERON:0010314,1.40e-12,92;UBERON:0004111,1.58e-12,122;UBERON:0002048,8.53e-11,14;UBERON:0000117,8.53e-11,14;UBERON:0000171,8.53e-11,14;UBERON:0000170,8.53e-11,14;UBERON:0005597,8.53e-11,14;UBERON:0000118,8.53e-11,14;UBERON:0000955,9.81e-11,47;UBERON:0006238,9.81e-11,47;UBERON:0002346,1.48e-10,64;UBERON:0003075,1.48e-10,64;UBERON:0007284,1.48e-10,64;UBERON:0002616,2.73e-10,46;UBERON:0004121,5.73e-09,95;UBERON:0000924,5.73e-09,95;UBERON:0006601,5.73e-09,95;UBERON:0005153,2.40e-08,17;UBERON:0010371,3.45e-08,73;UBERON:0003080,5.12e-08,40;UBERON:0005178,1.10e-07,17;UBERON:0005181,1.10e-07,17;UBERON:0002224,1.10e-07,17;UBERON:0000915,1.10e-07,17;UBERON:0008947,1.10e-07,17;UBERON:0003258,1.10e-07,17;UBERON:0002020,1.45e-07,34;UBERON:0003076,1.68e-07,12;UBERON:0003057,1.68e-07,12;UBERON:0002780,1.85e-07,39;UBERON:0001890,1.85e-07,39;UBERON:0006240,1.85e-07,39;UBERON:0005157,2.50e-07,20;UBERON:0002021,3.94e-07,10;UBERON:0000411,3.94e-07,10;UBERON:0001950,3.94e-07,10 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,7.19483016055474,6.59058548203415,2.72201858703997,3.77963338388479,2.87505128729943,0,0,0,0,0.286533439938757,0.515672092277442,1.21389876515759,2.64495489636016,2.53532561402472,0,0,0,0,0,4.19440154725767,10.7581125490035,0.207379224616955,0.270011876663381,0.420649922702764,40.2767888009363,31.8050698970323,0.122490799214954,0.191690942036473,0.919218786610021,22.0231761998777,37.5400773970452,33.6398307831173,0.659431438650969,1.28082701043374,1.04182674111352,45.2276458382237,37.7050948721226,38.0467636964257,15.9099436155781,18.7930618654816,5.96478226640962,0.151452386666368,0.906858721281426,0.289864488701678,0.860423876981386,0,0,0,0,1.40444420131752,0,0,0,1.97180787687353,0,0,0,0,0,0,1.37020655662872,0,5.04703272820404,2.94925055502431,3.04465478312141,4.84292544237723,4.06951129492081,4.23319345688537,4.77533047052767,0.247194967734374,0.578397427679647,0,0.485300549842228,0.662524555381181,0,0,24.8863677459815,32.8831329697124,0.255457055208591,0,0,0,43.4392854273986,20.5875271268382,0.753926112677186,15.1227158567281,19.6900902144355,45.9211578476628,47.6989313419207,3.1570202793598,2.23932547098167,3.53811861807145,1.05220927943237,0.520481771850815,0.459804208866946,0,0.90422890701429,0.680364991513279,1.2811372028485,0.937017245597288,6.46758426847539,0.431135985865684,0.756424320671277,1.58356011747554,3.72632745126877,0.834141747676794,0.696504333044333,0.61734640922383,3.58261680273288,0,0,0,0.621377317606506,1.17263029990548,1.62055855314913,1.65721314909647,2.95146347621106,3.39387648352232,1.86027155800326,1.60964040839772,1.16765342367169,1.81015834904829,1.14917224855367,0.648550476366846,1.02339991197733,1.97595103761946,1.47627060636409,20.8187049078486,0.411618449517138,0,1.05780226665418,0.639864751605702,1.62565670302307,0.902072229254653,1.21010114774006,0.444756087689741,0,0.949058123089023,0.823494773620054,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.648414149624083,0.199141273254367,1.13800740571849,1.48523066392647,1.1270773567308,0.814605311381257,0.775809948670503,0.631222379012867,1.07502113111237,0.295220295959204,0.156998727841375,0.123397163921801,0,0.83422552858047,0,0.224862112384854,0.202860121388503,0.241177159752417,1.78238096246994,3.74004978686054,0,0,0,2.60498663367952,0.624075346229121,0.252578877947112,0,0,36.5811316529877,3.97931964718018,6.19266910479698,7.29903868833309,15.9589368836181,39.6989830137103,75.2217905199803,43.5148034722891,37.6747994413796,43.4070791711599,44.6473352240964,43.5876417143863,45.0707802669987,52.7969063822517,0,0,0,0.275936746304732,60.206471245422,76.7736547178931,0,0.504941854408746,0.315508219416257,1.17131623288992,1.29254038639679,0.955875191810208,1.33679204449436,1.69845918473299,0,0.876767573733936,0,6.10510501201433,1.27746076687442,2.49291845134157,1.62886959353576,2.14461159864296,1.32745138339963,1.21390318077491,1.51161778482376,0.754420319023592,0.295301892880773,0.614870295887855,0,0.363533729477506,0.356497378384721,0.632073515871632,1.05418608574999,0,1.36175842301515,0.900305470156551,1.16422815404479,1.92903331528433,2.83744373827638,6.0645397984704,6.08831376227848,10.0473433207818,0,0,1.10264199027481,0.65954501176592,0.968786560175433,0.72375509913787,0.119372344003136,0,0.582961673259701,68.9782123479096,0.341741761595705,3.92135049130123,1.48155621895769,0.376736914009382,0,0.228778173206523,0,0,0,0,1.58167996790568,1.01659733563424,1.18805874903981,2.92723614420256,0.655087691238533,1.48350781023303,1.90102948168273,1.04702376793612,0.388844919875379,0,0,2.24274819065968,1.98550188548517,3.69457257853691,2.58319646955462,1.35164900392623,1.64300134104056,1.3020438484395,0.838874755405687,0,0.576060012515731,0,0.202725215290164,0.410843828659309,0.129920822977795,0.358053391334963,0,0,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0.443971906748129,0,0.167884616364078,1.9318959403219,0.93841237725591,0.183151624267265,0,3.00943262421218,16.942555278512,13.3494318587081,12.0308057822273,10.3111909406213,29.4585483501376,20.3956352295219,20.925697507186,11.7083512838297,11.3285602246051,13.4617681055473,0,1.19707462020309,0.853668028770671,0.972426868273176,0.838452650511929,0.735374033800057,3.77819437262746,3.29656091582231,2.24643446714271,3.28506375292937,3.04175159868288,4.52703219326583,2.90288673156635,4.22566005872137,3.0440798546475,2.38146845641537,2.43357084484197,3.6652751888104,1.64834360321323,4.56316652416632,3.08582327146874,3.37204031702741,3.33810665926249,1.88950341622027,3.10560955370591,3.89227196301712,2.56099162021882,3.15683653725411,2.71608227691724,2.24456908663095,3.44041552560105,3.05363895364247,3.6830793885272,2.78886314134739,1.54325288784913,0.749431733813838,5.38042699424439,3.22306581072447,0.956441660344217,2.20591419119516,1.85494268496337 | |||
|short_description=p2@Lgi3 | |||
}} |
Revision as of 03:00, 13 September 2013
Short description: | p2@Lgi3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lgi3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1589 |
Association with transcript: | 0bp_to_ENSMUST00000047331, NM_145219, uc007uog.2, uc007uoh.2_5end |
EntrezGene: | Lgi3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.