FFCP PHASE1:Hg19::chr5:110559929..110559940,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=814|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1464|TSSclassifier=S|UniProt=Q16566|association_with_transcript=-6bp_to_NM_001744_5end|coexpression_cluster_id=C118|description=CAGE_peak_8_at_CAMK4_5end|id=chr5:110559929..110559940,+|ontology_enrichment_celltype=CL:0000084!8.73e-16!25;CL:0000827!8.73e-16!25;CL:0000791!1.04e-13!18;CL:0000789!1.04e-13!18;CL:0002420!1.04e-13!18;CL:0002419!1.04e-13!18;CL:0000790!1.04e-13!18;CL:0000838!5.54e-13!52;CL:0000542!1.46e-12!53;CL:0000051!1.46e-12!53;CL:0000625!1.96e-08!11;CL:0000624!2.98e-08!6|ontology_enrichment_celltype_v019=CL:0000815;1.17e-10;2!CL:0000792;1.17e-10;2!CL:0002677;1.17e-10;2!CL:0000624;8.27e-08;6!CL:0000898;2.19e-07;3|ontology_enrichment_celltype_v019_2=CL:0000815,9.63e-11,2;CL:0000792,9.63e-11,2;CL:0002677,9.63e-11,2;CL:0000624,6.19e-08,6;CL:0000898,1.93e-07,3|ontology_enrichment_development_v019=UBERON:0006215;4.57e-17;3!UBERON:0006601;1.08e-11;82!UBERON:0010122;1.27e-11;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.30e-28!57;UBERON:0005068!2.30e-28!57;UBERON:0006241!2.30e-28!57;UBERON:0007135!2.30e-28!57;UBERON:0000955!4.00e-28!69;UBERON:0006238!4.00e-28!69;UBERON:0002780!2.02e-27!41;UBERON:0001890!2.02e-27!41;UBERON:0006240!2.02e-27!41;UBERON:0002616!6.56e-27!59;UBERON:0001869!8.86e-27!32;UBERON:0003080!1.72e-26!42;UBERON:0001893!3.76e-26!34;UBERON:0002020!4.73e-26!34;UBERON:0003528!4.73e-26!34;UBERON:0002791!6.00e-25!33;UBERON:0001017!1.30e-23!82;UBERON:0003056!6.79e-23!61;UBERON:0003075!3.66e-22!86;UBERON:0007284!3.66e-22!86;UBERON:0002619!7.06e-22!22;UBERON:0005743!9.06e-22!86;UBERON:0000073!2.60e-21!94;UBERON:0001016!2.60e-21!94;UBERON:0007023!3.64e-21!115;UBERON:0002346!1.87e-20!90;UBERON:0001950!3.01e-20!20;UBERON:0000153!2.62e-19!129;UBERON:0007811!2.62e-19!129;UBERON:0000956!1.86e-18!25;UBERON:0000203!1.86e-18!25;UBERON:0000033!2.32e-17!123;UBERON:0004121!6.17e-12!169;UBERON:0000924!2.93e-11!173;UBERON:0006601!2.93e-11!173;UBERON:0002420!6.72e-10!9;UBERON:0007245!6.72e-10!9;UBERON:0010009!6.72e-10!9;UBERON:0010011!6.72e-10!9;UBERON:0000454!6.72e-10!9;UBERON:0002308!4.25e-09!9;UBERON:0000125!4.25e-09!9;UBERON:0000200!1.50e-08!6;UBERON:0001871!6.34e-08!7;UBERON:0009663!1.45e-07!7;UBERON:0002021!2.77e-07!5;UBERON:0000369!6.99e-07!4;UBERON:0002435!6.99e-07!4;UBERON:0000204!6.99e-07!4;UBERON:0010082!6.99e-07!4;UBERON:0000349!7.30e-07!5|ontology_enrichment_uberon_v019=UBERON:0001869;4.75e-42;32!UBERON:0001893;1.19e-39;34!UBERON:0002791;5.00e-39;32!UBERON:0003528;5.44e-34;34!UBERON:0002020;5.44e-34;34!UBERON:0001950;1.90e-32;20!UBERON:0002780;1.62e-29;41!UBERON:0001890;1.62e-29;41!UBERON:0002619;2.07e-29;22!UBERON:0000956;9.88e-26;25!UBERON:0000203;9.88e-26;25!UBERON:0000955;8.40e-24;68!UBERON:0000073;3.29e-22;53!UBERON:0002616;3.29e-22;53!UBERON:0000369;1.07e-21;4!UBERON:0002435;1.07e-21;4!UBERON:0000204;1.07e-21;4!UBERON:0002420;8.04e-21;9!UBERON:0007245;8.04e-21;9!UBERON:0010009;8.04e-21;9!UBERON:0010011;8.04e-21;9!UBERON:0000454;8.04e-21;9!UBERON:0000200;1.77e-20;6!UBERON:0001017;2.28e-20;75!UBERON:0009663;6.06e-19;7!UBERON:0005383;1.09e-16;3!UBERON:0005382;1.09e-16;3!UBERON:0001870;1.41e-15;3!UBERON:0000125;1.12e-14;9!UBERON:0002308;1.12e-14;9!UBERON:0001016;1.91e-13;83!UBERON:0001873;1.27e-11;2!UBERON:0002702;1.17e-10;2!UBERON:0007023;2.33e-10;114!UBERON:0002021;3.39e-10;5!UBERON:0002037;9.37e-09;6!UBERON:0001871;3.45e-07;6!UBERON:0001874;9.04e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.92e-47,32;UBERON:0000073,1.14e-45,53;UBERON:0002616,1.14e-45,53;UBERON:0002780,1.57e-44,41;UBERON:0001890,1.57e-44,41;UBERON:0003080,1.57e-44,41;UBERON:0006240,1.57e-44,41;UBERON:0001893,7.25e-44,34;UBERON:0001049,5.48e-43,56;UBERON:0005068,5.48e-43,56;UBERON:0006241,5.48e-43,56;UBERON:0007135,5.48e-43,56;UBERON:0002791,1.49e-41,32;UBERON:0000955,8.16e-41,68;UBERON:0006238,8.16e-41,68;UBERON:0003528,5.89e-39,34;UBERON:0002020,5.89e-39,34;UBERON:0001017,2.05e-36,81;UBERON:0001950,1.02e-32,20;UBERON:0001016,2.78e-32,89;UBERON:0002619,1.18e-29,22;UBERON:0003056,1.11e-28,61;UBERON:0003075,7.16e-28,82;UBERON:0007284,7.16e-28,82;UBERON:0002346,2.39e-26,86;UBERON:0000956,6.01e-26,25;UBERON:0000203,6.01e-26,25;UBERON:0007023,5.94e-25,114;UBERON:0000369,9.38e-22,4;UBERON:0002435,9.38e-22,4;UBERON:0000204,9.38e-22,4;UBERON:0010082,9.38e-22,4;UBERON:0010371,6.25e-21,104;UBERON:0002420,7.40e-21,9;UBERON:0007245,7.40e-21,9;UBERON:0010009,7.40e-21,9;UBERON:0010011,7.40e-21,9;UBERON:0000454,7.40e-21,9;UBERON:0000200,1.13e-20,6;UBERON:0009663,5.97e-19,7;UBERON:0010314,5.04e-17,132;UBERON:0005383,9.33e-17,3;UBERON:0005382,9.33e-17,3;UBERON:0001870,1.05e-15,3;UBERON:0000125,1.10e-14,9;UBERON:0002308,1.10e-14,9;UBERON:0004121,2.48e-14,171;UBERON:0000924,2.48e-14,171;UBERON:0006601,2.48e-14,171;UBERON:0001873,1.12e-11,2;UBERON:0010122,1.12e-11,2;UBERON:0002702,8.72e-11,2;UBERON:0011216,1.17e-10,223;UBERON:0002021,3.45e-10,5;UBERON:0000025,4.80e-09,192;UBERON:0002037,9.50e-09,6;UBERON:0006215,9.50e-09,6;UBERON:0001871,3.38e-07,6;UBERON:0001874,8.81e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96709770113833,0.786021525498329,0.616804496998528,0.501559486172034,1.62961133316795,0.946895611469467,0,1.11410456885174,1.76763544484902,2.21533894583621,0,0.384273959177026,0.910415432919148,2.13769275984779,0.276350017785848,0.869409257205157,1.33457906845854,1.60524496853828,1.04535523804977,1.24640276967323,0.766440987203842,2.06176467289578,0.506039384039006,0.95569624297229,0.651083453856419,0.950452044448374,0.602300476311091,0.895906278080929,0,0.710331756132051,0.821127996921047,0.604820229674197,0,0.579297615531196,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.351339142772504,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.862510299438069,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.215714200818617,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.714695326373367,0.411362273086194,0,0,0,0,0,0,0,0,0.640276590135727,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,3.97659059106519,0.844016498463076,0,0.16480387422676,0,0,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,3.87733098438087,2.96857914117924,0,0,0,0,0,0,0,0.344743373241465,0,0,9.74315524395223,2.89431452700979,12.2065389053667,7.29823115546083,8.86642856860643,1.31631238292384,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0.104421949505455,0.067401132980677,0,2.34264445725339,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,3.73533696139684,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,3.00210144354895,0.547621515567972,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.423366660328922,0.795229689809303,0.136203406111576,0,0,0,0,0,2.97672827624321,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0.646414781807753,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,1.77213635993397,2.3184990331373,1.752673029891,0,0.665574309221114,0.124192805882767,0,0,0.303298235083296,0.570930667089935,0,0.468334905806882,0,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0.414775308455192,0.194860308839388,0,0,0,0,0,1.39991177098451,0.106691729694141,0.688859918643263,0,0,0,0,0.255788742607303,0.539124056983409,0,0.327628914576042,0,0,0,0,0,0.0788617450012534,0,0,0.3062454773532,5.3952549081026,5.6678630530234,0.798169295285756,3.69209455633359,0.252071696221718,4.70269316756682,1.93770774758221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43135304626221,0.781078098613847,0.620060389503552,1.9024743058172,0,0.548257766857182,0.496211178389294,0,0,0.535701835878287,1.3451348888753,0,0,0,0,0,0.611727596791485,1.84163765975977,0,0,0,7.69866390588409,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0.299823467774787,0,0,0,0,0,0,0,2.37970215668201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.827463966895162,0,0.23806443146374,0.710478008196067,0.620747142958579,0.112131862580613,0,0.202117188958219,0,0,0.134704106029175,0,0.332660356546013,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0.961705476909699|short_description=p8@CAMK4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=814 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1464 | |||
|TSSclassifier=S | |||
|UniProt=Q16566 | |||
|association_with_transcript=-6bp_to_NM_001744_5end | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_8_at_CAMK4_5end | |||
|id=chr5:110559929..110559940,+ | |||
|ontology_enrichment_celltype=CL:0000084!8.73e-16!25;CL:0000827!8.73e-16!25;CL:0000791!1.04e-13!18;CL:0000789!1.04e-13!18;CL:0002420!1.04e-13!18;CL:0002419!1.04e-13!18;CL:0000790!1.04e-13!18;CL:0000838!5.54e-13!52;CL:0000542!1.46e-12!53;CL:0000051!1.46e-12!53;CL:0000625!1.96e-08!11;CL:0000624!2.98e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000815;1.17e-10;2!CL:0000792;1.17e-10;2!CL:0002677;1.17e-10;2!CL:0000624;8.27e-08;6!CL:0000898;2.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,9.63e-11,2;CL:0000792,9.63e-11,2;CL:0002677,9.63e-11,2;CL:0000624,6.19e-08,6;CL:0000898,1.93e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.57e-17;3!UBERON:0006601;1.08e-11;82!UBERON:0010122;1.27e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.30e-28!57;UBERON:0005068!2.30e-28!57;UBERON:0006241!2.30e-28!57;UBERON:0007135!2.30e-28!57;UBERON:0000955!4.00e-28!69;UBERON:0006238!4.00e-28!69;UBERON:0002780!2.02e-27!41;UBERON:0001890!2.02e-27!41;UBERON:0006240!2.02e-27!41;UBERON:0002616!6.56e-27!59;UBERON:0001869!8.86e-27!32;UBERON:0003080!1.72e-26!42;UBERON:0001893!3.76e-26!34;UBERON:0002020!4.73e-26!34;UBERON:0003528!4.73e-26!34;UBERON:0002791!6.00e-25!33;UBERON:0001017!1.30e-23!82;UBERON:0003056!6.79e-23!61;UBERON:0003075!3.66e-22!86;UBERON:0007284!3.66e-22!86;UBERON:0002619!7.06e-22!22;UBERON:0005743!9.06e-22!86;UBERON:0000073!2.60e-21!94;UBERON:0001016!2.60e-21!94;UBERON:0007023!3.64e-21!115;UBERON:0002346!1.87e-20!90;UBERON:0001950!3.01e-20!20;UBERON:0000153!2.62e-19!129;UBERON:0007811!2.62e-19!129;UBERON:0000956!1.86e-18!25;UBERON:0000203!1.86e-18!25;UBERON:0000033!2.32e-17!123;UBERON:0004121!6.17e-12!169;UBERON:0000924!2.93e-11!173;UBERON:0006601!2.93e-11!173;UBERON:0002420!6.72e-10!9;UBERON:0007245!6.72e-10!9;UBERON:0010009!6.72e-10!9;UBERON:0010011!6.72e-10!9;UBERON:0000454!6.72e-10!9;UBERON:0002308!4.25e-09!9;UBERON:0000125!4.25e-09!9;UBERON:0000200!1.50e-08!6;UBERON:0001871!6.34e-08!7;UBERON:0009663!1.45e-07!7;UBERON:0002021!2.77e-07!5;UBERON:0000369!6.99e-07!4;UBERON:0002435!6.99e-07!4;UBERON:0000204!6.99e-07!4;UBERON:0010082!6.99e-07!4;UBERON:0000349!7.30e-07!5 | |||
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|short_description=p8@CAMK4 | |||
}} |
Revision as of 12:38, 13 September 2013
Short description: | p8@CAMK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_CAMK4_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | -6bp_to_NM_001744_5end |
EntrezGene: | CAMK4 |
HGNC: | 1464 |
UniProt: | Q16566 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 9.63e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.63e-11 | 2 |
naive regulatory T cell | 9.63e-11 | 2 |
CD4-positive, alpha-beta T cell | 6.19e-08 | 6 |
naive T cell | 1.93e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.