FFCP PHASE1:Hg19::chr5:140346102..140346123,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56134|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8677|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc003lii.2_5end|description=CAGE_peak_2_at_PCDHAC2_5end|id=chr5:140346102..140346123,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002322;2.68e-13;5!CL:0002321;4.81e-13;15!CL:0000333;4.29e-09;5|ontology_enrichment_celltype_v019_2=CL:0002322,2.48e-13,5|ontology_enrichment_development_v019=UBERON:0006215;9.61e-10;3!UBERON:0006601;9.97e-09;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:169;3.15e-11;6!DOID:3095;1.82e-08;22!DOID:2994;1.82e-08;22|ontology_enrichment_disease_v019_2=DOID:169,4.05e-11,6;DOID:3095,2.26e-08,22;DOID:2994,2.26e-08,22|ontology_enrichment_uberon=UBERON:0000073!1.74e-30!94;UBERON:0001016!1.74e-30!94;UBERON:0001017!2.06e-28!82;UBERON:0005743!3.47e-27!86;UBERON:0001049!9.28e-27!57;UBERON:0005068!9.28e-27!57;UBERON:0006241!9.28e-27!57;UBERON:0007135!9.28e-27!57;UBERON:0000955!1.73e-24!69;UBERON:0006238!1.73e-24!69;UBERON:0002616!1.34e-23!59;UBERON:0007023!2.20e-21!115;UBERON:0002780!4.40e-21!41;UBERON:0001890!4.40e-21!41;UBERON:0006240!4.40e-21!41;UBERON:0002346!1.32e-20!90;UBERON:0003080!3.02e-20!42;UBERON:0003075!5.07e-20!86;UBERON:0007284!5.07e-20!86;UBERON:0001893!1.83e-19!34;UBERON:0002791!1.37e-18!33;UBERON:0001869!2.51e-18!32;UBERON:0002020!9.08e-18!34;UBERON:0003528!9.08e-18!34;UBERON:0002619!6.78e-17!22;UBERON:0003056!7.71e-16!61;UBERON:0000924!1.08e-15!173;UBERON:0006601!1.08e-15!173;UBERON:0001950!1.48e-15!20;UBERON:0004121!4.54e-15!169;UBERON:0000956!6.20e-15!25;UBERON:0000203!6.20e-15!25;UBERON:0000033!5.92e-14!123;UBERON:0000153!2.00e-13!129;UBERON:0007811!2.00e-13!129;UBERON:0000025!7.36e-13!194;UBERON:0000922!1.28e-10!612;UBERON:0000477!4.36e-10!286;UBERON:0004111!6.31e-10!241;UBERON:0002050!3.44e-08!605;UBERON:0005423!3.44e-08!605;UBERON:0000923!6.01e-08!604;UBERON:0005291!6.01e-08!604;UBERON:0006598!6.01e-08!604;UBERON:0002532!6.01e-08!604;UBERON:0003076!1.13e-07!15;UBERON:0003057!1.13e-07!15;UBERON:0000483!1.47e-07!309;UBERON:0000468!2.02e-07!659;UBERON:0000119!3.20e-07!312;UBERON:0000200!5.12e-07!6|ontology_enrichment_uberon_v019=UBERON:0001950;4.22e-35;20!UBERON:0002619;1.24e-31;22!UBERON:0001869;1.89e-29;32!UBERON:0001893;7.49e-29;34!UBERON:0002791;1.70e-27;32!UBERON:0000956;1.97e-27;25!UBERON:0000203;1.97e-27;25!UBERON:0003528;8.42e-25;34!UBERON:0002020;8.42e-25;34!UBERON:0002780;2.93e-20;41!UBERON:0001890;2.93e-20;41!UBERON:0000073;1.20e-17;53!UBERON:0002616;1.20e-17;53!UBERON:0000200;1.04e-16;6!UBERON:0000955;1.02e-14;68!UBERON:0001871;4.03e-14;6!UBERON:0001017;3.13e-12;75!UBERON:0001016;6.02e-11;83!UBERON:0001870;1.77e-09;3!UBERON:0001872;1.89e-09;5!UBERON:0000013;4.29e-09;5!UBERON:0002410;4.29e-09;5!UBERON:0000473;2.18e-08;8!UBERON:0002420;4.08e-08;9!UBERON:0007245;4.08e-08;9!UBERON:0010009;4.08e-08;9!UBERON:0010011;4.08e-08;9!UBERON:0000454;4.08e-08;9!UBERON:0000369;2.21e-07;4!UBERON:0002435;2.21e-07;4!UBERON:0000204;2.21e-07;4!UBERON:0001905;5.18e-07;2!UBERON:0002757;5.18e-07;2!UBERON:0010134;5.18e-07;2!UBERON:0005408;5.18e-07;2!UBERON:0001899;5.18e-07;2!UBERON:0001876;6.34e-07;2!UBERON:0002702;9.57e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.13e-35,20;UBERON:0001869,6.16e-33,32;UBERON:0000073,1.06e-31,53;UBERON:0002616,1.06e-31,53;UBERON:0002619,1.22e-31,22;UBERON:0001893,1.05e-30,34;UBERON:0001016,1.82e-30,89;UBERON:0002780,3.54e-30,41;UBERON:0001890,3.54e-30,41;UBERON:0003080,3.54e-30,41;UBERON:0006240,3.54e-30,41;UBERON:0002791,1.26e-29,32;UBERON:0001049,1.28e-29,56;UBERON:0005068,1.28e-29,56;UBERON:0006241,1.28e-29,56;UBERON:0007135,1.28e-29,56;UBERON:0003528,1.32e-27,34;UBERON:0002020,1.32e-27,34;UBERON:0000956,1.94e-27,25;UBERON:0000203,1.94e-27,25;UBERON:0000955,8.73e-27,68;UBERON:0006238,8.73e-27,68;UBERON:0001017,1.24e-26,81;UBERON:0003056,2.49e-18,61;UBERON:0003075,6.16e-18,82;UBERON:0007284,6.16e-18,82;UBERON:0000200,7.78e-17,6;UBERON:0002346,9.05e-17,86;UBERON:0011216,2.91e-15,223;UBERON:0007023,1.48e-14,114;UBERON:0001871,1.94e-14,6;UBERON:0004121,2.87e-13,171;UBERON:0000924,2.87e-13,171;UBERON:0006601,2.87e-13,171;UBERON:0010371,1.19e-12,104;UBERON:0010314,3.48e-11,132;UBERON:0001870,2.08e-09,3;UBERON:0001872,2.73e-09,5;UBERON:0000013,5.29e-09,5;UBERON:0002410,5.29e-09,5;UBERON:0000025,8.61e-09,192;UBERON:0000473,2.34e-08,8;UBERON:0002420,3.62e-08,9;UBERON:0007245,3.62e-08,9;UBERON:0010009,3.62e-08,9;UBERON:0010011,3.62e-08,9;UBERON:0000454,3.62e-08,9;UBERON:0000369,2.18e-07,4;UBERON:0002435,2.18e-07,4;UBERON:0000204,2.18e-07,4;UBERON:0010082,2.18e-07,4;UBERON:0001876,5.14e-07,2;UBERON:0001905,5.29e-07,2;UBERON:0002757,5.29e-07,2;UBERON:0010134,5.29e-07,2;UBERON:0005408,5.29e-07,2;UBERON:0001899,5.29e-07,2|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.90361775633475,1.47901604066715,0.0774672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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56134 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8677 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc003lii.2_5end | |||
|description=CAGE_peak_2_at_PCDHAC2_5end | |||
|id=chr5:140346102..140346123,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.68e-13;5!CL:0002321;4.81e-13;15!CL:0000333;4.29e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.48e-13,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.61e-10;3!UBERON:0006601;9.97e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;3.15e-11;6!DOID:3095;1.82e-08;22!DOID:2994;1.82e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.05e-11,6;DOID:3095,2.26e-08,22;DOID:2994,2.26e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.74e-30!94;UBERON:0001016!1.74e-30!94;UBERON:0001017!2.06e-28!82;UBERON:0005743!3.47e-27!86;UBERON:0001049!9.28e-27!57;UBERON:0005068!9.28e-27!57;UBERON:0006241!9.28e-27!57;UBERON:0007135!9.28e-27!57;UBERON:0000955!1.73e-24!69;UBERON:0006238!1.73e-24!69;UBERON:0002616!1.34e-23!59;UBERON:0007023!2.20e-21!115;UBERON:0002780!4.40e-21!41;UBERON:0001890!4.40e-21!41;UBERON:0006240!4.40e-21!41;UBERON:0002346!1.32e-20!90;UBERON:0003080!3.02e-20!42;UBERON:0003075!5.07e-20!86;UBERON:0007284!5.07e-20!86;UBERON:0001893!1.83e-19!34;UBERON:0002791!1.37e-18!33;UBERON:0001869!2.51e-18!32;UBERON:0002020!9.08e-18!34;UBERON:0003528!9.08e-18!34;UBERON:0002619!6.78e-17!22;UBERON:0003056!7.71e-16!61;UBERON:0000924!1.08e-15!173;UBERON:0006601!1.08e-15!173;UBERON:0001950!1.48e-15!20;UBERON:0004121!4.54e-15!169;UBERON:0000956!6.20e-15!25;UBERON:0000203!6.20e-15!25;UBERON:0000033!5.92e-14!123;UBERON:0000153!2.00e-13!129;UBERON:0007811!2.00e-13!129;UBERON:0000025!7.36e-13!194;UBERON:0000922!1.28e-10!612;UBERON:0000477!4.36e-10!286;UBERON:0004111!6.31e-10!241;UBERON:0002050!3.44e-08!605;UBERON:0005423!3.44e-08!605;UBERON:0000923!6.01e-08!604;UBERON:0005291!6.01e-08!604;UBERON:0006598!6.01e-08!604;UBERON:0002532!6.01e-08!604;UBERON:0003076!1.13e-07!15;UBERON:0003057!1.13e-07!15;UBERON:0000483!1.47e-07!309;UBERON:0000468!2.02e-07!659;UBERON:0000119!3.20e-07!312;UBERON:0000200!5.12e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.22e-35;20!UBERON:0002619;1.24e-31;22!UBERON:0001869;1.89e-29;32!UBERON:0001893;7.49e-29;34!UBERON:0002791;1.70e-27;32!UBERON:0000956;1.97e-27;25!UBERON:0000203;1.97e-27;25!UBERON:0003528;8.42e-25;34!UBERON:0002020;8.42e-25;34!UBERON:0002780;2.93e-20;41!UBERON:0001890;2.93e-20;41!UBERON:0000073;1.20e-17;53!UBERON:0002616;1.20e-17;53!UBERON:0000200;1.04e-16;6!UBERON:0000955;1.02e-14;68!UBERON:0001871;4.03e-14;6!UBERON:0001017;3.13e-12;75!UBERON:0001016;6.02e-11;83!UBERON:0001870;1.77e-09;3!UBERON:0001872;1.89e-09;5!UBERON:0000013;4.29e-09;5!UBERON:0002410;4.29e-09;5!UBERON:0000473;2.18e-08;8!UBERON:0002420;4.08e-08;9!UBERON:0007245;4.08e-08;9!UBERON:0010009;4.08e-08;9!UBERON:0010011;4.08e-08;9!UBERON:0000454;4.08e-08;9!UBERON:0000369;2.21e-07;4!UBERON:0002435;2.21e-07;4!UBERON:0000204;2.21e-07;4!UBERON:0001905;5.18e-07;2!UBERON:0002757;5.18e-07;2!UBERON:0010134;5.18e-07;2!UBERON:0005408;5.18e-07;2!UBERON:0001899;5.18e-07;2!UBERON:0001876;6.34e-07;2!UBERON:0002702;9.57e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.13e-35,20;UBERON:0001869,6.16e-33,32;UBERON:0000073,1.06e-31,53;UBERON:0002616,1.06e-31,53;UBERON:0002619,1.22e-31,22;UBERON:0001893,1.05e-30,34;UBERON:0001016,1.82e-30,89;UBERON:0002780,3.54e-30,41;UBERON:0001890,3.54e-30,41;UBERON:0003080,3.54e-30,41;UBERON:0006240,3.54e-30,41;UBERON:0002791,1.26e-29,32;UBERON:0001049,1.28e-29,56;UBERON:0005068,1.28e-29,56;UBERON:0006241,1.28e-29,56;UBERON:0007135,1.28e-29,56;UBERON:0003528,1.32e-27,34;UBERON:0002020,1.32e-27,34;UBERON:0000956,1.94e-27,25;UBERON:0000203,1.94e-27,25;UBERON:0000955,8.73e-27,68;UBERON:0006238,8.73e-27,68;UBERON:0001017,1.24e-26,81;UBERON:0003056,2.49e-18,61;UBERON:0003075,6.16e-18,82;UBERON:0007284,6.16e-18,82;UBERON:0000200,7.78e-17,6;UBERON:0002346,9.05e-17,86;UBERON:0011216,2.91e-15,223;UBERON:0007023,1.48e-14,114;UBERON:0001871,1.94e-14,6;UBERON:0004121,2.87e-13,171;UBERON:0000924,2.87e-13,171;UBERON:0006601,2.87e-13,171;UBERON:0010371,1.19e-12,104;UBERON:0010314,3.48e-11,132;UBERON:0001870,2.08e-09,3;UBERON:0001872,2.73e-09,5;UBERON:0000013,5.29e-09,5;UBERON:0002410,5.29e-09,5;UBERON:0000025,8.61e-09,192;UBERON:0000473,2.34e-08,8;UBERON:0002420,3.62e-08,9;UBERON:0007245,3.62e-08,9;UBERON:0010009,3.62e-08,9;UBERON:0010011,3.62e-08,9;UBERON:0000454,3.62e-08,9;UBERON:0000369,2.18e-07,4;UBERON:0002435,2.18e-07,4;UBERON:0000204,2.18e-07,4;UBERON:0010082,2.18e-07,4;UBERON:0001876,5.14e-07,2;UBERON:0001905,5.29e-07,2;UBERON:0002757,5.29e-07,2;UBERON:0010134,5.29e-07,2;UBERON:0005408,5.29e-07,2;UBERON:0001899,5.29e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.90361775633475,1.47901604066715,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0.378139268656271,0,0.087834785693126,0.654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,2.26123176769604,0.419499436209906,0.550236083880135,0.626984899610432,0,0,0,0,0,0,0.367663080345869,0,0.267899184852239,1.12264686313085,0.675668882899933,0,0.949265659568129,0.732806975721629,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0.404132016209064,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19552671033272,1.06023814657188,2.20768491452085,1.86589899027667,1.7662459561294,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.330881918197182,0,0.474541238222193,0.404493924480493,0,0,2.95262181849859,0,0.4115740113314,0,0,0,4.72631925345123,0,0,0.686271241194102,0,0,0,0.0925884451585296,0.977424915930974,0,0,0.34779121492523,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.716468181622786,0.871901815541886,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0.602878754119172,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,0,0,0.670065061337395,0,0,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0.482561763430822,0,0,0,0,0,0,0,0.200506470303285,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0,0,0,0,0.623224249527161,1.15699440752685,0.576570202095319,0.638063562472921,1.51736671283325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,1.82822014178473,0.670302275535787,1.08890984861323,0.470719003883896,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,1.70918513803957,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921722292925374,1.11838053946208,0.667396566847634,0,0,0,0,0,0,0,0.146508179271894,0,1.67165076416218,0,0,0,0,3.97659059106519,2.53204949538923,1.44701316529778,0,0.211125408127993,0.19924798825107,0.552567831062295,0,0,0,0,0,0.537063524026827,0,0.0986434056369336,0,0,2.90799823828566,2.22643435588443,0,0,0,0,1.0241410345695,0,0,0,0.291604613383254,1.56262495439963,3.54296554325536,0.723578631752448,3.05163472634166,2.76448149828062,4.13766666534966,2.19385397153973,0,0,0.307801034015188,0.341826167541004,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0.741412462787447,0,0.937057782901357,0,0,0.242780379534093,0,0,1.83643656978294,0.379119477770928,0.751617097072463,0.311064574191741,0,0,0,0,0,0.416024019039416,0,0,0,0,0.343972064943233,0,0,0,0.484945082442097,0,0.225980740780532,0,0,3.41878298161745,0,0.64127056201227,1.06726497369676,0.19980960958213,1.44090417154106,0.229073192331831,0,0.288109595976299,0.372757606696298,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0.458320848023367,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0.688992370603241,0,0.795229689809303,0.953423842781029,1.76828463311521,1.37539436597234,0.415440338029185,0,0,5.1637123159321,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0.179287339332845,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.92562821219883,1.88195521672762,0,0.747511887973863,0.628817220398664,0,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0,0,0,2.65820453990096,2.44052529803926,2.003054891304,0.573409195690071,0.998361463831671,0.931446044120752,0.553394539744923,0.499921631848426,0,0,0.235265819698172,0,0,0,1.40227985908335,0,0,0,0,0,0,0,0,0.159296767163702,0.899606224327209,0.310525913752519,0,0.265841714557995,0,0.751288044986092,0,1.22061219961398,0,0.751873899297419,0,0.398095888698616,0,0,0,0,0,0,0.782982875895635,0,0,0,0,1.23520578864389,0.219284049578707,0.176689145945881,0.192914038270915,0,0,0,0,1.65910123382077,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,0,0,1.53867458491389,0,1.02315497042921,4.63646689005732,2.04445724412665,1.85656384926424,0,0.212574920101683,0.371807292777007,0.558644917973244,0,0,3.20228299314188,0,0,4.36758730655925,1.41696576325585,0.798169295285756,1.23069818544453,0,3.73449163306777,2.74508597574147,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,2.43135304626221,0.781078098613847,2.06686796501184,3.7415328014405,1.09394961803644,0,0,0.351742488719241,0,4.2856146870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| |||
|short_description=p2@PCDHAC2 | |||
}} |
Revision as of 13:34, 13 September 2013
Short description: | p2@PCDHAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PCDHAC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003lii.2_5end |
EntrezGene: | PCDHAC2 |
HGNC: | 8677 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.48e-13 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.05e-11 | 6 |
germ cell and embryonal cancer | 2.26e-08 | 22 |
germ cell cancer | 2.26e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.