FFCP PHASE1:Mm9::chr2:173604714..173604727,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:173604714..173604727,+|id=chr2:173604714..173604727,+|ontology_enrichment_celltype=CL:0000055!2.42e-09!50;CL:0000548!4.50e-08!115;CL:0000004!4.50e-08!115;CL:0000255!4.50e-08!115;CL:0002371!1.03e-07!118;CL:0000723!1.43e-07!91;CL:0000048!1.43e-07!91;CL:0000034!5.51e-07!97;CL:0000144!6.89e-07!121;CL:0000012!6.89e-07!121|ontology_enrichment_celltype_v019_2=CL:0002321,1.23e-16,70;CL:0000393,5.42e-15,39;CL:0000211,5.42e-15,39;CL:0000680,3.17e-13,6;CL:0000187,3.17e-13,6;CL:0000056,3.17e-13,6;CL:0000117,5.33e-12,23;CL:0000337,5.33e-12,23;CL:0000222,3.05e-11,7;CL:0000723,5.00e-09,91;CL:0000048,5.00e-09,91;CL:0002319,1.24e-08,43;CL:0000355,1.35e-08,9;CL:0000068,1.75e-08,3;CL:0002202,1.75e-08,3;CL:0000069,1.75e-08,3;CL:0002632,1.75e-08,3;CL:0002368,1.75e-08,3;CL:0000307,1.75e-08,3;CL:0000377,1.75e-08,3;CL:0000221,2.30e-08,44;CL:0000133,2.30e-08,44;CL:0000034,3.86e-08,97;CL:0000192,1.07e-07,3;CL:0000359,1.07e-07,3;CL:0002539,1.07e-07,3;CL:0002614,1.07e-07,3;CL:0000514,1.07e-07,3;CL:0000540,1.31e-07,33;CL:0000047,1.31e-07,33;CL:0000031,1.31e-07,33;CL:0000404,1.31e-07,33;CL:0002494,3.90e-07,3;CL:0000737,3.90e-07,3;CL:0000746,3.90e-07,3;CL:0000513,3.90e-07,3;CL:0002610,4.10e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.05e-10!75;UBERON:0001016!4.05e-10!75;UBERON:0002020!1.75e-09!34;UBERON:0001017!2.82e-09!73;UBERON:0005743!2.82e-09!73;UBERON:0004121!7.47e-09!102;UBERON:0000924!7.47e-09!102;UBERON:0006601!7.47e-09!102;UBERON:0001049!1.01e-07!52;UBERON:0005068!1.01e-07!52;UBERON:0006241!1.01e-07!52;UBERON:0007135!1.01e-07!52;UBERON:0002346!1.32e-07!71;UBERON:0003075!1.32e-07!71;UBERON:0007284!1.32e-07!71;UBERON:0002791!7.84e-07!29;UBERON:0003528!7.84e-07!29;UBERON:0001893!7.84e-07!29;UBERON:0000955!9.92e-07!50;UBERON:0006238!9.92e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.88e-15,10;UBERON:0000411,3.88e-15,10;UBERON:0001950,3.88e-15,10;UBERON:0002020,9.50e-15,34;UBERON:0000073,1.25e-11,54;UBERON:0001016,1.93e-11,75;UBERON:0001017,1.08e-10,73;UBERON:0003528,1.24e-09,29;UBERON:0002791,1.24e-09,29;UBERON:0001893,1.24e-09,29;UBERON:0001134,1.35e-08,9;UBERON:0002036,1.35e-08,9;UBERON:0002385,1.35e-08,9;UBERON:0000486,1.35e-08,9;UBERON:0007503,1.35e-08,9;UBERON:0001015,1.35e-08,9;UBERON:0002329,1.35e-08,9;UBERON:0003082,1.35e-08,9;UBERON:0003059,1.35e-08,9;UBERON:0007282,1.35e-08,9;UBERON:0004290,1.35e-08,9;UBERON:0009618,1.35e-08,9;UBERON:0003126,1.75e-08,3;UBERON:0001005,1.75e-08,3;UBERON:0007196,1.75e-08,3;UBERON:0001558,1.75e-08,3;UBERON:0001049,2.35e-08,52;UBERON:0005068,2.35e-08,52;UBERON:0006241,2.35e-08,52;UBERON:0007135,2.35e-08,52;UBERON:0002619,2.69e-08,17;UBERON:0001948,6.04e-08,5;UBERON:0002315,6.04e-08,5;UBERON:0004121,6.34e-08,95;UBERON:0000924,6.34e-08,95;UBERON:0006601,6.34e-08,95;UBERON:0001135,1.07e-07,3;UBERON:0002038,1.07e-07,3;UBERON:0009663,1.07e-07,3;UBERON:0009661,1.07e-07,3;UBERON:0004237,1.07e-07,3;UBERON:0004695,1.07e-07,3;UBERON:0000125,1.07e-07,3;UBERON:0002111,1.07e-07,3;UBERON:0002308,1.07e-07,3;UBERON:0004178,1.07e-07,3;UBERON:0000383,1.14e-07,10;UBERON:0000025,2.18e-07,114;UBERON:0004684,4.10e-07,3;UBERON:0002275,4.10e-07,3;UBERON:0007524,6.54e-07,11;UBERON:0003077,6.54e-07,11;UBERON:0007285,6.54e-07,11|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0.513653904676515,0.239316476986009,0.171200729931206,0.34968160967599,0,0.607425802169478,0,0.946386496074713,0.411343300817216,0,0.510259740906419,0.397163804803541,0.783599367416806,0.639969691173627,0.45881856213434,0,0,0.215471232685889,0.760093677825496,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0,1.88845226963366,1.62203089951223,1.65192076945513,0,0.218025156380447,0.439372365468944,0.972149495371417,0.419959264876088,1.43752564364972,0.167782606057736,0,0.336093799142464,2.05807548828758,1.14613375975503,1.03134418455488,0.202316460859598,0.528990979272033,1.90149421051854,0.338844532069132,0.889294796111139,0.899899717281399,2.96659908770092,0.7104801149461,0.299600110518405,1.15265491596466,0,0,0.420649922702764,3.14216082844184,1.32521124570968,0.244981598429908,0.383381884072945,0,1.10115880999389,1.78762273319263,1.22885226604995,0.395658863190582,1.00636407962651,0,2.79182999001381,1.68828783009504,1.22238598221448,1.47314292736834,1.99320353118744,0.931997229126503,0.832988126665025,1.43585964202892,0.579728977403356,0.860423876981386,0,2.15881276655127,1.29955283489534,0,0.140444420131752,0.340860645156116,0.779358013808606,0.70667914902068,0.281686839553361,0,0,0,2.59789249213457,3.04031838570118,2.02209778005913,0.11418387971906,0,0.29688427812965,0.346970653532272,0.608930956624282,0.691846491768175,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0.599902730993408,0.127070227073065,0.149790639404823,0.915001205637253,0.251308704225729,0.173824320192276,0,0.20778804455956,0,0.305518091550949,0,0.252722758433675,0.420883711772948,0.260240885925407,0,0,0.150704817835715,0.136072998302656,0,0,0.517406741478031,0,0.189106080167819,0,0,0,0.348252166522167,0,0.199034266818493,0,0,1.13665399758237,0.207125772535502,0.703578179943289,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,0.205809224758569,0.660837565967596,0.264450566663544,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0.795825888164603,0,0,0,0.597423819763102,0,0,0,0.610953983535943,0.193952487167626,0,0,0.147610147979602,0.627994911365499,0,0,0,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0.476087281772027,0,0,0.221464689648775,0,0.163863314715738,0.518054945597687,0,0,1.08781136763742,0,0,0.963303539926752,0.586058432961016,0,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0.356737635204141,0.329098041204242,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0.370850604021019,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0,0,2.86401185404534,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0,0.403304740547362,0,0,0,0.226730383615211,0.443971906748129,0.269141569828427,0.167884616364078,0.19318959403219,0,0,0,0.501572104035363,3.95326289831947,2.30162618253588,2.86447756719698,6.35856774671644,1.37016503954128,1.5107877947794,0,1.80128481289688,0.906284817968409,2.5888015587591,0.207574695168353,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.0936415074698824,0.384150914429216,0.17230640686684,0,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.715308569841963,0.290692833264657,0.188218760830661,0.338458431566706,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421|short_description=p@chr2:173604714..173604727,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:173604714..173604727,+ | |||
|id=chr2:173604714..173604727,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.42e-09!50;CL:0000548!4.50e-08!115;CL:0000004!4.50e-08!115;CL:0000255!4.50e-08!115;CL:0002371!1.03e-07!118;CL:0000723!1.43e-07!91;CL:0000048!1.43e-07!91;CL:0000034!5.51e-07!97;CL:0000144!6.89e-07!121;CL:0000012!6.89e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.23e-16,70;CL:0000393,5.42e-15,39;CL:0000211,5.42e-15,39;CL:0000680,3.17e-13,6;CL:0000187,3.17e-13,6;CL:0000056,3.17e-13,6;CL:0000117,5.33e-12,23;CL:0000337,5.33e-12,23;CL:0000222,3.05e-11,7;CL:0000723,5.00e-09,91;CL:0000048,5.00e-09,91;CL:0002319,1.24e-08,43;CL:0000355,1.35e-08,9;CL:0000068,1.75e-08,3;CL:0002202,1.75e-08,3;CL:0000069,1.75e-08,3;CL:0002632,1.75e-08,3;CL:0002368,1.75e-08,3;CL:0000307,1.75e-08,3;CL:0000377,1.75e-08,3;CL:0000221,2.30e-08,44;CL:0000133,2.30e-08,44;CL:0000034,3.86e-08,97;CL:0000192,1.07e-07,3;CL:0000359,1.07e-07,3;CL:0002539,1.07e-07,3;CL:0002614,1.07e-07,3;CL:0000514,1.07e-07,3;CL:0000540,1.31e-07,33;CL:0000047,1.31e-07,33;CL:0000031,1.31e-07,33;CL:0000404,1.31e-07,33;CL:0002494,3.90e-07,3;CL:0000737,3.90e-07,3;CL:0000746,3.90e-07,3;CL:0000513,3.90e-07,3;CL:0002610,4.10e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.05e-10!75;UBERON:0001016!4.05e-10!75;UBERON:0002020!1.75e-09!34;UBERON:0001017!2.82e-09!73;UBERON:0005743!2.82e-09!73;UBERON:0004121!7.47e-09!102;UBERON:0000924!7.47e-09!102;UBERON:0006601!7.47e-09!102;UBERON:0001049!1.01e-07!52;UBERON:0005068!1.01e-07!52;UBERON:0006241!1.01e-07!52;UBERON:0007135!1.01e-07!52;UBERON:0002346!1.32e-07!71;UBERON:0003075!1.32e-07!71;UBERON:0007284!1.32e-07!71;UBERON:0002791!7.84e-07!29;UBERON:0003528!7.84e-07!29;UBERON:0001893!7.84e-07!29;UBERON:0000955!9.92e-07!50;UBERON:0006238!9.92e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.88e-15,10;UBERON:0000411,3.88e-15,10;UBERON:0001950,3.88e-15,10;UBERON:0002020,9.50e-15,34;UBERON:0000073,1.25e-11,54;UBERON:0001016,1.93e-11,75;UBERON:0001017,1.08e-10,73;UBERON:0003528,1.24e-09,29;UBERON:0002791,1.24e-09,29;UBERON:0001893,1.24e-09,29;UBERON:0001134,1.35e-08,9;UBERON:0002036,1.35e-08,9;UBERON:0002385,1.35e-08,9;UBERON:0000486,1.35e-08,9;UBERON:0007503,1.35e-08,9;UBERON:0001015,1.35e-08,9;UBERON:0002329,1.35e-08,9;UBERON:0003082,1.35e-08,9;UBERON:0003059,1.35e-08,9;UBERON:0007282,1.35e-08,9;UBERON:0004290,1.35e-08,9;UBERON:0009618,1.35e-08,9;UBERON:0003126,1.75e-08,3;UBERON:0001005,1.75e-08,3;UBERON:0007196,1.75e-08,3;UBERON:0001558,1.75e-08,3;UBERON:0001049,2.35e-08,52;UBERON:0005068,2.35e-08,52;UBERON:0006241,2.35e-08,52;UBERON:0007135,2.35e-08,52;UBERON:0002619,2.69e-08,17;UBERON:0001948,6.04e-08,5;UBERON:0002315,6.04e-08,5;UBERON:0004121,6.34e-08,95;UBERON:0000924,6.34e-08,95;UBERON:0006601,6.34e-08,95;UBERON:0001135,1.07e-07,3;UBERON:0002038,1.07e-07,3;UBERON:0009663,1.07e-07,3;UBERON:0009661,1.07e-07,3;UBERON:0004237,1.07e-07,3;UBERON:0004695,1.07e-07,3;UBERON:0000125,1.07e-07,3;UBERON:0002111,1.07e-07,3;UBERON:0002308,1.07e-07,3;UBERON:0004178,1.07e-07,3;UBERON:0000383,1.14e-07,10;UBERON:0000025,2.18e-07,114;UBERON:0004684,4.10e-07,3;UBERON:0002275,4.10e-07,3;UBERON:0007524,6.54e-07,11;UBERON:0003077,6.54e-07,11;UBERON:0007285,6.54e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0.513653904676515,0.239316476986009,0.171200729931206,0.34968160967599,0,0.607425802169478,0,0.946386496074713,0.411343300817216,0,0.510259740906419,0.397163804803541,0.783599367416806,0.639969691173627,0.45881856213434,0,0,0.215471232685889,0.760093677825496,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0,0.683045484958446,0,1.88845226963366,1.62203089951223,1.65192076945513,0,0.218025156380447,0.439372365468944,0.972149495371417,0.419959264876088,1.43752564364972,0.167782606057736,0,0.336093799142464,2.05807548828758,1.14613375975503,1.03134418455488,0.202316460859598,0.528990979272033,1.90149421051854,0.338844532069132,0.889294796111139,0.899899717281399,2.96659908770092,0.7104801149461,0.299600110518405,1.15265491596466,0,0,0.420649922702764,3.14216082844184,1.32521124570968,0.244981598429908,0.383381884072945,0,1.10115880999389,1.78762273319263,1.22885226604995,0.395658863190582,1.00636407962651,0,2.79182999001381,1.68828783009504,1.22238598221448,1.47314292736834,1.99320353118744,0.931997229126503,0.832988126665025,1.43585964202892,0.579728977403356,0.860423876981386,0,2.15881276655127,1.29955283489534,0,0.140444420131752,0.340860645156116,0.779358013808606,0.70667914902068,0.281686839553361,0,0,0,2.59789249213457,3.04031838570118,2.02209778005913,0.11418387971906,0,0.29688427812965,0.346970653532272,0.608930956624282,0.691846491768175,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0.599902730993408,0.127070227073065,0.149790639404823,0.915001205637253,0.251308704225729,0.173824320192276,0,0.20778804455956,0,0.305518091550949,0,0.252722758433675,0.420883711772948,0.260240885925407,0,0,0.150704817835715,0.136072998302656,0,0,0.517406741478031,0,0.189106080167819,0,0,0,0.348252166522167,0,0.199034266818493,0,0,1.13665399758237,0.207125772535502,0.703578179943289,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,0.205809224758569,0.660837565967596,0.264450566663544,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0.795825888164603,0,0,0,0.597423819763102,0,0,0,0.610953983535943,0.193952487167626,0,0,0.147610147979602,0.627994911365499,0,0,0,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0.476087281772027,0,0,0.221464689648775,0,0.163863314715738,0.518054945597687,0,0,1.08781136763742,0,0,0.963303539926752,0.586058432961016,0,0,0.315508219416257,0.390438744296638,0,0,0.222798674082394,0,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0,0.356737635204141,0.329098041204242,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0.370850604021019,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0,0,2.86401185404534,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0,0.403304740547362,0,0,0,0.226730383615211,0.443971906748129,0.269141569828427,0.167884616364078,0.19318959403219,0,0,0,0.501572104035363,3.95326289831947,2.30162618253588,2.86447756719698,6.35856774671644,1.37016503954128,1.5107877947794,0,1.80128481289688,0.906284817968409,2.5888015587591,0.207574695168353,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.0936415074698824,0.384150914429216,0.17230640686684,0,0,0,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0.715308569841963,0.290692833264657,0.188218760830661,0.338458431566706,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr2:173604714..173604727,+ | |||
}} |
Revision as of 23:07, 13 September 2013
Short description: | p@chr2:173604714..173604727, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:173604714..173604727, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.