FFCP PHASE1:Mm9::chr3:114607184..114607209,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=229759|HGNC=|MCL_coexpression_id=39|UniProt=P63056,Q3UVC5|association_with_transcript=-71bp_to_NM_153458,uc008rbm.1_5end|description=CAGE_peak_3_at_Olfm3_5end|id=chr3:114607184..114607209,+|ontology_enrichment_celltype=CL:0000540!3.47e-11!33;CL:0000047!3.47e-11!33;CL:0000031!3.47e-11!33;CL:0000404!3.47e-11!33;CL:0000117!6.81e-10!23;CL:0000337!6.81e-10!23;CL:0000393!4.41e-08!39;CL:0000211!4.41e-08!39;CL:0002319!1.25e-07!43;CL:0000221!2.93e-07!44;CL:0000133!2.93e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.98e-13,23;CL:0000337,1.98e-13,23;CL:0000540,1.34e-09,33;CL:0000047,1.34e-09,33;CL:0000031,1.34e-09,33;CL:0000404,1.34e-09,33;CL:0000393,1.39e-07,39;CL:0000211,1.39e-07,39;CL:0002610,4.27e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.26e-31!71;UBERON:0003075!1.26e-31!71;UBERON:0007284!1.26e-31!71;UBERON:0001017!4.61e-28!73;UBERON:0005743!4.61e-28!73;UBERON:0000073!1.61e-27!75;UBERON:0001016!1.61e-27!75;UBERON:0004121!1.06e-26!102;UBERON:0000924!1.06e-26!102;UBERON:0006601!1.06e-26!102;UBERON:0001049!3.93e-25!52;UBERON:0005068!3.93e-25!52;UBERON:0006241!3.93e-25!52;UBERON:0007135!3.93e-25!52;UBERON:0000955!1.35e-23!50;UBERON:0006238!1.35e-23!50;UBERON:0002616!7.97e-23!49;UBERON:0000033!9.64e-22!63;UBERON:0003056!5.44e-18!49;UBERON:0003080!4.52e-17!40;UBERON:0002020!2.73e-16!34;UBERON:0002780!3.57e-16!39;UBERON:0001890!3.57e-16!39;UBERON:0006240!3.57e-16!39;UBERON:0007811!1.20e-12!86;UBERON:0002791!1.99e-12!29;UBERON:0003528!1.99e-12!29;UBERON:0001893!1.99e-12!29;UBERON:0000153!4.17e-10!94;UBERON:0002021!2.43e-09!10;UBERON:0000411!2.43e-09!10;UBERON:0001950!2.43e-09!10;UBERON:0003076!8.51e-09!12;UBERON:0003057!8.51e-09!12;UBERON:0002619!1.05e-07!17;UBERON:0000956!2.76e-07!21;UBERON:0001869!2.76e-07!21;UBERON:0000203!2.76e-07!21;UBERON:0002420!5.74e-07!8;UBERON:0007245!5.74e-07!8;UBERON:0010009!5.74e-07!8;UBERON:0010011!5.74e-07!8;UBERON:0000454!5.74e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.23e-38,54;UBERON:0001017,6.13e-35,73;UBERON:0001049,2.40e-34,52;UBERON:0005068,2.40e-34,52;UBERON:0006241,2.40e-34,52;UBERON:0007135,2.40e-34,52;UBERON:0001016,9.45e-34,75;UBERON:0002346,6.99e-30,64;UBERON:0003075,6.99e-30,64;UBERON:0007284,6.99e-30,64;UBERON:0000955,1.47e-26,47;UBERON:0006238,1.47e-26,47;UBERON:0004121,4.33e-26,95;UBERON:0000924,4.33e-26,95;UBERON:0006601,4.33e-26,95;UBERON:0002616,3.41e-25,46;UBERON:0010371,4.20e-25,73;UBERON:0002020,7.58e-25,34;UBERON:0003080,3.68e-20,40;UBERON:0002780,1.33e-18,39;UBERON:0001890,1.33e-18,39;UBERON:0006240,1.33e-18,39;UBERON:0010314,4.30e-18,92;UBERON:0002021,6.50e-18,10;UBERON:0000411,6.50e-18,10;UBERON:0001950,6.50e-18,10;UBERON:0003528,2.10e-17,29;UBERON:0002791,2.10e-17,29;UBERON:0001893,2.10e-17,29;UBERON:0003056,7.83e-17,49;UBERON:0003076,1.24e-15,12;UBERON:0003057,1.24e-15,12;UBERON:0002619,1.30e-11,17;UBERON:0002240,2.17e-11,6;UBERON:0005174,2.17e-11,6;UBERON:0001137,2.17e-11,6;UBERON:0000025,4.46e-11,114;UBERON:0000956,8.11e-11,21;UBERON:0001869,8.11e-11,21;UBERON:0000203,8.11e-11,21;UBERON:0001948,8.13e-10,5;UBERON:0002315,8.13e-10,5;UBERON:0004111,8.15e-10,122;UBERON:0002950,1.65e-08,4;UBERON:0001891,1.65e-08,4;UBERON:0009616,1.65e-08,4;UBERON:0010286,1.65e-08,4;UBERON:0002420,3.79e-08,8;UBERON:0007245,3.79e-08,8;UBERON:0010009,3.79e-08,8;UBERON:0010011,3.79e-08,8;UBERON:0000454,3.79e-08,8;UBERON:0011216,3.75e-07,194;UBERON:0004684,4.27e-07,3;UBERON:0002275,4.27e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,0,0,0,0,0,0,0,0,0,0,0.210324961351382,5.71301968807607,3.97563373712904,0.244981598429908,0.191690942036473,0,7.70811166995721,7.66124028511126,8.29475279583715,1.84640802822271,0.731901148819277,0.52091337055676,5.30447698102624,6.75315132038016,6.57032465440283,9.1334861496837,6.69146899755784,3.72798891650601,0,0.0755715601067855,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.890652834388949,0.867426633830679,0.304465478312141,0.691846491768175,0.60289056221049,0.705532242814229,0.376999773989026,0,0,0,0,0,0,0,41.8676539726512,28.2753054198164,0,0,0,0,10.4853447583376,9.15001205637253,1.88481528169297,6.77914848749878,7.67146371990992,7.06479351502504,6.97637431191358,0.101839363850316,0,0,0.210441855886474,1.43132487258974,0,0.540186389416048,0,0.136072998302656,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,0.411618449517138,0,0,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.597423819763102,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.50918126935297,8.67366480782304,0,0,0.315508219416257,0.390438744296638,1.29254038639679,0.238968797952552,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,3.53453448063988,0,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74483566329167,0.36012218806262,0,1.07168517515796,0.532020700926821,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,3.3885110557024,5.52390283808612,2.86447756719698,7.38968684077857,9.59115527678899,3.7769694869485,2.70009000092722,6.75481804836331,4.53142408984205,9.31968561153276,0.103787347584177,0.399024873401031,1.02440163452481,0.486213434136588,0.628839487883947,0.183843508450014,1.11123363900808,0.618105171716683,0.320919209591815,0.252697211763798,1.01391719956096,0.565879024158229,0.655490552289177,0.704276676453562,0.459483751644906,0.476293691283074,0.231768651889711,0.964546102318525,0.412085900803307,0.441596760403192,1.02860775715625,0.354951612318675,0.715308569841963,0.581385666529314,0.188218760830661,0.592302255241736,0.182927972872773,0.263069711437843,0.271608227691724,0,0.474540072496697,0.591026894253381,0,0.619747364743864,0.385813221962283,1.24905288968973,0.233931608445408,0.644613162144895,0,0.882365676478062,0.463735671240843|short_description=p3@Olfm3}} | ||
|EntrezGene=229759 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt=P63056,Q3UVC5 | |||
|association_with_transcript=-71bp_to_NM_153458,uc008rbm.1_5end | |||
|description=CAGE_peak_3_at_Olfm3_5end | |||
|id=chr3:114607184..114607209,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.47e-11!33;CL:0000047!3.47e-11!33;CL:0000031!3.47e-11!33;CL:0000404!3.47e-11!33;CL:0000117!6.81e-10!23;CL:0000337!6.81e-10!23;CL:0000393!4.41e-08!39;CL:0000211!4.41e-08!39;CL:0002319!1.25e-07!43;CL:0000221!2.93e-07!44;CL:0000133!2.93e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.98e-13,23;CL:0000337,1.98e-13,23;CL:0000540,1.34e-09,33;CL:0000047,1.34e-09,33;CL:0000031,1.34e-09,33;CL:0000404,1.34e-09,33;CL:0000393,1.39e-07,39;CL:0000211,1.39e-07,39;CL:0002610,4.27e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.26e-31!71;UBERON:0003075!1.26e-31!71;UBERON:0007284!1.26e-31!71;UBERON:0001017!4.61e-28!73;UBERON:0005743!4.61e-28!73;UBERON:0000073!1.61e-27!75;UBERON:0001016!1.61e-27!75;UBERON:0004121!1.06e-26!102;UBERON:0000924!1.06e-26!102;UBERON:0006601!1.06e-26!102;UBERON:0001049!3.93e-25!52;UBERON:0005068!3.93e-25!52;UBERON:0006241!3.93e-25!52;UBERON:0007135!3.93e-25!52;UBERON:0000955!1.35e-23!50;UBERON:0006238!1.35e-23!50;UBERON:0002616!7.97e-23!49;UBERON:0000033!9.64e-22!63;UBERON:0003056!5.44e-18!49;UBERON:0003080!4.52e-17!40;UBERON:0002020!2.73e-16!34;UBERON:0002780!3.57e-16!39;UBERON:0001890!3.57e-16!39;UBERON:0006240!3.57e-16!39;UBERON:0007811!1.20e-12!86;UBERON:0002791!1.99e-12!29;UBERON:0003528!1.99e-12!29;UBERON:0001893!1.99e-12!29;UBERON:0000153!4.17e-10!94;UBERON:0002021!2.43e-09!10;UBERON:0000411!2.43e-09!10;UBERON:0001950!2.43e-09!10;UBERON:0003076!8.51e-09!12;UBERON:0003057!8.51e-09!12;UBERON:0002619!1.05e-07!17;UBERON:0000956!2.76e-07!21;UBERON:0001869!2.76e-07!21;UBERON:0000203!2.76e-07!21;UBERON:0002420!5.74e-07!8;UBERON:0007245!5.74e-07!8;UBERON:0010009!5.74e-07!8;UBERON:0010011!5.74e-07!8;UBERON:0000454!5.74e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.23e-38,54;UBERON:0001017,6.13e-35,73;UBERON:0001049,2.40e-34,52;UBERON:0005068,2.40e-34,52;UBERON:0006241,2.40e-34,52;UBERON:0007135,2.40e-34,52;UBERON:0001016,9.45e-34,75;UBERON:0002346,6.99e-30,64;UBERON:0003075,6.99e-30,64;UBERON:0007284,6.99e-30,64;UBERON:0000955,1.47e-26,47;UBERON:0006238,1.47e-26,47;UBERON:0004121,4.33e-26,95;UBERON:0000924,4.33e-26,95;UBERON:0006601,4.33e-26,95;UBERON:0002616,3.41e-25,46;UBERON:0010371,4.20e-25,73;UBERON:0002020,7.58e-25,34;UBERON:0003080,3.68e-20,40;UBERON:0002780,1.33e-18,39;UBERON:0001890,1.33e-18,39;UBERON:0006240,1.33e-18,39;UBERON:0010314,4.30e-18,92;UBERON:0002021,6.50e-18,10;UBERON:0000411,6.50e-18,10;UBERON:0001950,6.50e-18,10;UBERON:0003528,2.10e-17,29;UBERON:0002791,2.10e-17,29;UBERON:0001893,2.10e-17,29;UBERON:0003056,7.83e-17,49;UBERON:0003076,1.24e-15,12;UBERON:0003057,1.24e-15,12;UBERON:0002619,1.30e-11,17;UBERON:0002240,2.17e-11,6;UBERON:0005174,2.17e-11,6;UBERON:0001137,2.17e-11,6;UBERON:0000025,4.46e-11,114;UBERON:0000956,8.11e-11,21;UBERON:0001869,8.11e-11,21;UBERON:0000203,8.11e-11,21;UBERON:0001948,8.13e-10,5;UBERON:0002315,8.13e-10,5;UBERON:0004111,8.15e-10,122;UBERON:0002950,1.65e-08,4;UBERON:0001891,1.65e-08,4;UBERON:0009616,1.65e-08,4;UBERON:0010286,1.65e-08,4;UBERON:0002420,3.79e-08,8;UBERON:0007245,3.79e-08,8;UBERON:0010009,3.79e-08,8;UBERON:0010011,3.79e-08,8;UBERON:0000454,3.79e-08,8;UBERON:0011216,3.75e-07,194;UBERON:0004684,4.27e-07,3;UBERON:0002275,4.27e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,0,0,0,0,0,0,0,0,0,0,0.210324961351382,5.71301968807607,3.97563373712904,0.244981598429908,0.191690942036473,0,7.70811166995721,7.66124028511126,8.29475279583715,1.84640802822271,0.731901148819277,0.52091337055676,5.30447698102624,6.75315132038016,6.57032465440283,9.1334861496837,6.69146899755784,3.72798891650601,0,0.0755715601067855,0,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.890652834388949,0.867426633830679,0.304465478312141,0.691846491768175,0.60289056221049,0.705532242814229,0.376999773989026,0,0,0,0,0,0,0,41.8676539726512,28.2753054198164,0,0,0,0,10.4853447583376,9.15001205637253,1.88481528169297,6.77914848749878,7.67146371990992,7.06479351502504,6.97637431191358,0.101839363850316,0,0,0.210441855886474,1.43132487258974,0,0.540186389416048,0,0.136072998302656,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,0.411618449517138,0,0,0,0,0,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.597423819763102,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.50918126935297,8.67366480782304,0,0,0.315508219416257,0.390438744296638,1.29254038639679,0.238968797952552,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,3.53453448063988,0,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74483566329167,0.36012218806262,0,1.07168517515796,0.532020700926821,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,3.3885110557024,5.52390283808612,2.86447756719698,7.38968684077857,9.59115527678899,3.7769694869485,2.70009000092722,6.75481804836331,4.53142408984205,9.31968561153276,0.103787347584177,0.399024873401031,1.02440163452481,0.486213434136588,0.628839487883947,0.183843508450014,1.11123363900808,0.618105171716683,0.320919209591815,0.252697211763798,1.01391719956096,0.565879024158229,0.655490552289177,0.704276676453562,0.459483751644906,0.476293691283074,0.231768651889711,0.964546102318525,0.412085900803307,0.441596760403192,1.02860775715625,0.354951612318675,0.715308569841963,0.581385666529314,0.188218760830661,0.592302255241736,0.182927972872773,0.263069711437843,0.271608227691724,0,0.474540072496697,0.591026894253381,0,0.619747364743864,0.385813221962283,1.24905288968973,0.233931608445408,0.644613162144895,0,0.882365676478062,0.463735671240843 | |||
|short_description=p3@Olfm3 | |||
}} |
Revision as of 01:17, 14 September 2013
Short description: | p3@Olfm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Olfm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -71bp_to_NM_153458, uc008rbm.1_5end |
EntrezGene: | Olfm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.98e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.98e-13 | 23 |
neuron | 1.34e-09 | 33 |
neuronal stem cell | 1.34e-09 | 33 |
neuroblast | 1.34e-09 | 33 |
electrically signaling cell | 1.34e-09 | 33 |
electrically responsive cell | 1.39e-07 | 39 |
electrically active cell | 1.39e-07 | 39 |
raphe nuclei neuron | 4.27e-07 | 3 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.