FFCP PHASE1:Hg19::chr7:54609687..54609702,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=222008|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28499|TSSclassifier=N|UniProt=Q8TAG5|association_with_transcript=-315bp_to_ENST00000302287,ENST00000407838_5end|coexpression_cluster_id=C3|description=CAGE_peak_10_at_VSTM2A_5end|id=chr7:54609687..54609702,+|ontology_enrichment_celltype=CL:0000047!3.97e-07!8|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.09e-10;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!1.26e-82!34;UBERON:0001869!2.44e-82!32;UBERON:0002791!3.09e-79!33;UBERON:0001049!1.87e-77!57;UBERON:0005068!1.87e-77!57;UBERON:0006241!1.87e-77!57;UBERON:0007135!1.87e-77!57;UBERON:0002780!2.05e-77!41;UBERON:0001890!2.05e-77!41;UBERON:0006240!2.05e-77!41;UBERON:0002020!7.13e-77!34;UBERON:0003528!7.13e-77!34;UBERON:0003080!2.00e-75!42;UBERON:0001017!3.95e-74!82;UBERON:0005743!1.07e-73!86;UBERON:0000073!1.49e-72!94;UBERON:0001016!1.49e-72!94;UBERON:0001950!2.41e-67!20;UBERON:0002619!2.92e-67!22;UBERON:0002616!2.25e-66!59;UBERON:0000955!7.67e-62!69;UBERON:0006238!7.67e-62!69;UBERON:0000956!7.62e-59!25;UBERON:0000203!7.62e-59!25;UBERON:0002346!1.38e-54!90;UBERON:0003075!1.52e-54!86;UBERON:0007284!1.52e-54!86;UBERON:0003056!3.54e-53!61;UBERON:0007023!9.80e-41!115;UBERON:0000924!5.35e-37!173;UBERON:0006601!5.35e-37!173;UBERON:0004121!2.77e-36!169;UBERON:0000033!4.22e-35!123;UBERON:0000153!4.68e-33!129;UBERON:0007811!4.68e-33!129;UBERON:0001871!2.33e-22!7;UBERON:0000200!2.36e-22!6;UBERON:0002420!2.55e-19!9;UBERON:0007245!2.55e-19!9;UBERON:0010009!2.55e-19!9;UBERON:0010011!2.55e-19!9;UBERON:0000454!2.55e-19!9;UBERON:0001872!3.38e-19!5;UBERON:0002308!5.52e-19!9;UBERON:0000125!5.52e-19!9;UBERON:0002021!8.16e-19!5;UBERON:0009663!1.50e-18!7;UBERON:0000025!7.47e-18!194;UBERON:0000369!8.07e-16!4;UBERON:0002435!8.07e-16!4;UBERON:0000204!8.07e-16!4;UBERON:0010082!8.07e-16!4;UBERON:0004111!1.71e-14!241;UBERON:0005383!2.83e-12!3;UBERON:0005382!2.83e-12!3;UBERON:0002771!3.29e-12!3;UBERON:0000477!1.38e-11!286;UBERON:0000064!6.05e-11!219;UBERON:0000475!1.80e-10!365;UBERON:0000483!4.46e-10!309;UBERON:0000119!6.84e-10!312;UBERON:0001873!1.39e-08!2;UBERON:0010122!1.39e-08!2;UBERON:0001870!1.74e-08!2;UBERON:0001875!1.12e-07!2;UBERON:0006514!1.12e-07!2;UBERON:0003076!1.73e-07!15;UBERON:0003057!1.73e-07!15;UBERON:0000349!3.06e-07!5;UBERON:0000922!5.06e-07!612;UBERON:0002298!8.75e-07!8|ontology_enrichment_uberon_v019=UBERON:0001950;1.28e-114;20!UBERON:0002619;2.36e-104;22!UBERON:0001869;3.88e-94;32!UBERON:0000956;6.51e-92;25!UBERON:0000203;6.51e-92;25!UBERON:0001893;9.44e-88;34!UBERON:0002791;6.30e-87;32!UBERON:0003528;6.10e-79;34!UBERON:0002020;6.10e-79;34!UBERON:0002780;1.50e-57;41!UBERON:0001890;1.50e-57;41!UBERON:0001872;1.10e-34;5!UBERON:0001871;1.27e-34;6!UBERON:0002021;2.54e-34;5!UBERON:0000073;3.36e-34;53!UBERON:0002616;3.36e-34;53!UBERON:0000200;9.80e-29;6!UBERON:0001017;5.96e-25;75!UBERON:0000955;9.95e-23;68!UBERON:0001016;6.05e-20;83!UBERON:0000369;5.87e-17;4!UBERON:0002435;5.87e-17;4!UBERON:0000204;5.87e-17;4!UBERON:0002771;8.39e-15;2!UBERON:0002420;6.96e-13;9!UBERON:0007245;6.96e-13;9!UBERON:0010009;6.96e-13;9!UBERON:0010011;6.96e-13;9!UBERON:0000454;6.96e-13;9!UBERON:0005383;8.74e-11;3!UBERON:0005382;8.74e-11;3!UBERON:0001870;2.05e-10;3!UBERON:0009663;6.59e-10;7!UBERON:0011216;2.63e-09;132!UBERON:0001874;1.02e-08;1!UBERON:0002902;1.22e-08;1!UBERON:0009899;1.22e-08;1!UBERON:0002581;1.95e-08;1!UBERON:0001882;1.95e-08;1!UBERON:0002022;1.95e-08;1!UBERON:0005403;1.95e-08;1!UBERON:0007190;4.56e-08;1!UBERON:0000125;8.38e-08;9!UBERON:0002308;8.38e-08;9!UBERON:0007023;1.07e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.73e-114,20;UBERON:0001869,1.27e-106,32;UBERON:0002619,3.11e-104,22;UBERON:0001893,2.65e-100,34;UBERON:0002791,1.80e-97,32;UBERON:0000956,8.29e-92,25;UBERON:0000203,8.29e-92,25;UBERON:0003528,1.12e-91,34;UBERON:0002020,1.12e-91,34;UBERON:0002780,6.41e-83,41;UBERON:0001890,6.41e-83,41;UBERON:0003080,6.41e-83,41;UBERON:0006240,6.41e-83,41;UBERON:0000073,1.36e-63,53;UBERON:0002616,1.36e-63,53;UBERON:0001049,4.95e-60,56;UBERON:0005068,4.95e-60,56;UBERON:0006241,4.95e-60,56;UBERON:0007135,4.95e-60,56;UBERON:0003056,7.34e-55,61;UBERON:0000955,1.26e-52,68;UBERON:0006238,1.26e-52,68;UBERON:0001017,8.43e-52,81;UBERON:0001016,3.08e-50,89;UBERON:0003075,6.20e-40,82;UBERON:0007284,6.20e-40,82;UBERON:0002346,6.61e-38,86;UBERON:0001872,8.36e-35,5;UBERON:0001871,1.27e-34,6;UBERON:0002021,4.44e-34,5;UBERON:0010371,1.09e-30,104;UBERON:0000200,6.01e-29,6;UBERON:0004121,1.94e-24,171;UBERON:0000924,1.94e-24,171;UBERON:0006601,1.94e-24,171;UBERON:0010314,2.47e-23,132;UBERON:0011216,4.70e-21,223;UBERON:0007023,1.69e-20,114;UBERON:0000369,5.73e-17,4;UBERON:0002435,5.73e-17,4;UBERON:0000204,5.73e-17,4;UBERON:0010082,5.73e-17,4;UBERON:0000025,2.65e-16,192;UBERON:0002771,6.35e-15,2;UBERON:0002420,6.35e-13,9;UBERON:0007245,6.35e-13,9;UBERON:0010009,6.35e-13,9;UBERON:0010011,6.35e-13,9;UBERON:0000454,6.35e-13,9;UBERON:0004111,3.65e-12,240;UBERON:0005383,8.75e-11,3;UBERON:0005382,8.75e-11,3;UBERON:0001870,1.87e-10,3;UBERON:0009663,6.50e-10,7;UBERON:0001874,1.05e-08,1;UBERON:0002902,1.31e-08,1;UBERON:0009899,1.31e-08,1;UBERON:0002581,1.41e-08,1;UBERON:0000483,1.42e-08,306;UBERON:0001882,1.88e-08,1;UBERON:0005403,1.88e-08,1;UBERON:0000119,1.90e-08,309;UBERON:0002022,2.33e-08,1;UBERON:0007190,4.41e-08,1;UBERON:0000125,8.29e-08,9;UBERON:0002308,8.29e-08,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68803299692615,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,1.76259386507517,0,0,0,0,0,0,0,0,0,0,0.885741385813839,5.18564686089254,0,0,0,1.97446857438575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,1.20990716048664,2.75465485467441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,2.53243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0.415440338029185,0,0,2.06548492637284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.07444650333337,2.1282458220105,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04630994085843,0,0,0.218419276384028,0,0.212574920101683,0,0,0,0,0,0,0,2.18379365327962,1.41696576325585,1.11743701340006,2.05116364240755,1.76450187355203,3.25039086581824,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62090203084147,3.90539049306924,2.27355476151302,1.26831620387814,1.64092442705466,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,2.82822926320251,0,0,0.078493092850514,5.18481446722806,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50962843566674,0,0,0,0,0,0,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,1.22384682343646,3.9271562130634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p10@VSTM2A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=222008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28499 | |||
|TSSclassifier=N | |||
|UniProt=Q8TAG5 | |||
|association_with_transcript=-315bp_to_ENST00000302287,ENST00000407838_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_10_at_VSTM2A_5end | |||
|id=chr7:54609687..54609702,+ | |||
|ontology_enrichment_celltype=CL:0000047!3.97e-07!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.09e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p10@VSTM2A | |||
}} |
Revision as of 01:34, 14 September 2013
Short description: | p10@VSTM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_VSTM2A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -315bp_to_ENST00000302287, ENST00000407838_5end |
EntrezGene: | VSTM2A |
HGNC: | 28499 |
UniProt: | Q8TAG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.