FFCP PHASE1:Mm9::chr8:125944624..125944663,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=22|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:125944624..125944663,+|id=chr8:125944624..125944663,+|ontology_enrichment_celltype=CL:0000540!3.28e-28!33;CL:0000047!3.28e-28!33;CL:0000031!3.28e-28!33;CL:0000404!3.28e-28!33;CL:0000117!5.32e-25!23;CL:0000337!5.32e-25!23;CL:0002319!3.46e-24!43;CL:0000221!2.52e-23!44;CL:0000133!2.52e-23!44;CL:0000393!6.44e-22!39;CL:0000211!6.44e-22!39;CL:0000055!6.57e-19!50;CL:0002321!5.86e-10!70;CL:0000220!5.86e-10!70;CL:0002609!1.28e-07!6|ontology_enrichment_celltype_v019_2=CL:0000540,2.20e-70,33;CL:0000047,2.20e-70,33;CL:0000031,2.20e-70,33;CL:0000404,2.20e-70,33;CL:0000117,3.71e-70,23;CL:0000337,3.71e-70,23;CL:0000393,7.68e-59,39;CL:0000211,7.68e-59,39;CL:0002319,6.23e-53,43;CL:0000221,1.27e-51,44;CL:0000133,1.27e-51,44;CL:0002321,1.13e-30,70;CL:0000723,1.81e-22,91;CL:0000048,1.81e-22,91;CL:0000034,8.99e-21,97;CL:0002609,3.51e-19,6;CL:0002613,4.94e-11,3;CL:0000120,7.17e-11,3;CL:0002608,3.32e-10,3;CL:0002612,3.32e-10,3;CL:0002614,1.03e-09,3;CL:0002610,1.79e-09,3;CL:0000107,1.15e-07,9;CL:0002611,1.95e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.53e-27!73;UBERON:0005743!1.53e-27!73;UBERON:0000073!2.85e-27!75;UBERON:0001016!2.85e-27!75;UBERON:0004121!1.58e-23!102;UBERON:0000924!1.58e-23!102;UBERON:0006601!1.58e-23!102;UBERON:0002346!3.40e-20!71;UBERON:0003075!3.40e-20!71;UBERON:0007284!3.40e-20!71;UBERON:0002020!1.42e-16!34;UBERON:0001049!1.69e-16!52;UBERON:0005068!1.69e-16!52;UBERON:0006241!1.69e-16!52;UBERON:0007135!1.69e-16!52;UBERON:0000033!2.76e-15!63;UBERON:0000955!1.93e-14!50;UBERON:0006238!1.93e-14!50;UBERON:0002616!6.51e-14!49;UBERON:0003056!2.97e-12!49;UBERON:0002791!5.36e-12!29;UBERON:0003528!5.36e-12!29;UBERON:0001893!5.36e-12!29;UBERON:0003080!1.84e-10!40;UBERON:0002780!6.24e-10!39;UBERON:0001890!6.24e-10!39;UBERON:0006240!6.24e-10!39;UBERON:0007811!7.22e-09!86;UBERON:0003076!2.25e-07!12;UBERON:0003057!2.25e-07!12;UBERON:0002240!2.54e-07!6;UBERON:0005174!2.54e-07!6;UBERON:0001137!2.54e-07!6;UBERON:0000153!4.22e-07!94;UBERON:0000956!5.91e-07!21;UBERON:0001869!5.91e-07!21;UBERON:0000203!5.91e-07!21;UBERON:0002420!6.50e-07!8;UBERON:0007245!6.50e-07!8;UBERON:0010009!6.50e-07!8;UBERON:0010011!6.50e-07!8;UBERON:0000454!6.50e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0002020,4.62e-27,34;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0000073,7.39e-22,54;UBERON:0002346,1.30e-17,64;UBERON:0003075,1.30e-17,64;UBERON:0007284,1.30e-17,64;UBERON:0001049,2.18e-16,52;UBERON:0005068,2.18e-16,52;UBERON:0006241,2.18e-16,52;UBERON:0007135,2.18e-16,52;UBERON:0003528,3.43e-16,29;UBERON:0002791,3.43e-16,29;UBERON:0001893,3.43e-16,29;UBERON:0001948,5.23e-16,5;UBERON:0002315,5.23e-16,5;UBERON:0010371,6.50e-15,73;UBERON:0002420,3.64e-14,8;UBERON:0007245,3.64e-14,8;UBERON:0010009,3.64e-14,8;UBERON:0010011,3.64e-14,8;UBERON:0000454,3.64e-14,8;UBERON:0002240,2.69e-13,6;UBERON:0005174,2.69e-13,6;UBERON:0001137,2.69e-13,6;UBERON:0002780,2.32e-11,39;UBERON:0001890,2.32e-11,39;UBERON:0006240,2.32e-11,39;UBERON:0003080,5.19e-11,40;UBERON:0010314,6.04e-11,92;UBERON:0002257,3.32e-10,3;UBERON:0002038,1.03e-09,3;UBERON:0009663,1.03e-09,3;UBERON:0009661,1.03e-09,3;UBERON:0000125,1.03e-09,3;UBERON:0002308,1.03e-09,3;UBERON:0004684,1.79e-09,3;UBERON:0002275,1.79e-09,3;UBERON:0002616,3.11e-09,46;UBERON:0010313,5.27e-09,3;UBERON:0002342,5.27e-09,3;UBERON:0002005,5.27e-09,3;UBERON:0005428,5.27e-09,3;UBERON:0005062,5.27e-09,3;UBERON:0000955,5.55e-09,47;UBERON:0006238,5.55e-09,47;UBERON:0011216,1.08e-08,194;UBERON:0003056,1.65e-08,49;UBERON:0002410,1.15e-07,9;UBERON:0002256,1.95e-07,2;UBERON:0002950,2.15e-07,4;UBERON:0001891,2.15e-07,4;UBERON:0009616,2.15e-07,4;UBERON:0010286,2.15e-07,4;UBERON:0000369,9.27e-07,5;UBERON:0002435,9.27e-07,5;UBERON:0000204,9.27e-07,5;UBERON:0010082,9.27e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,5.05791152148994,11.6378015439847,6.33831403506179,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,0.768436610643109,4.66603255388149,13.3655878948374,3.78584930432488,3.71346279724945,5.07997644188711,2.9397791811589,6.70918297127655,3.67687514644008,2.20231761998777,1.65993539510744,1.84327839907492,6.06676923558892,11.8933936683133,8.33461392890816,3.90856198601933,1.68828783009504,2.13917546887534,3.53554302568401,4.6982654663704,3.91438836233131,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0.449371918214468,0,0.628271760564322,0.173824320192276,0,0.83115217823824,0.648965052271031,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.234423373184406,0,0,1.26203287766503,1.17131623288992,1.07711698866399,0.477937595905104,0.222798674082394,0,0,1.16902343164525,1.18586333383957,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0.847328283455281,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,1.14579102687879,0.68741272937475,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.31136204275253,0,0.853668028770671,0.243106717068294,0.209613162627982,0.183843508450014,0.888986911206461,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.561849044819294,0.640251524048693,0.287177344778066,0,0.347652977834566,0.77163688185482,0,0.147198920134397,0.685738504770831,0.354951612318675,0.238436189947321,0.436039249896986,0.188218760830661,0.25384382367503,0.182927972872773,0,0.814824683075171,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0,0.499621155875892,0.701794825336225,0.214871054048298,0.191288332068843,0,0|short_description=p@chr8:125944624..125944663,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:125944624..125944663,+ | |||
|id=chr8:125944624..125944663,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.28e-28!33;CL:0000047!3.28e-28!33;CL:0000031!3.28e-28!33;CL:0000404!3.28e-28!33;CL:0000117!5.32e-25!23;CL:0000337!5.32e-25!23;CL:0002319!3.46e-24!43;CL:0000221!2.52e-23!44;CL:0000133!2.52e-23!44;CL:0000393!6.44e-22!39;CL:0000211!6.44e-22!39;CL:0000055!6.57e-19!50;CL:0002321!5.86e-10!70;CL:0000220!5.86e-10!70;CL:0002609!1.28e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.20e-70,33;CL:0000047,2.20e-70,33;CL:0000031,2.20e-70,33;CL:0000404,2.20e-70,33;CL:0000117,3.71e-70,23;CL:0000337,3.71e-70,23;CL:0000393,7.68e-59,39;CL:0000211,7.68e-59,39;CL:0002319,6.23e-53,43;CL:0000221,1.27e-51,44;CL:0000133,1.27e-51,44;CL:0002321,1.13e-30,70;CL:0000723,1.81e-22,91;CL:0000048,1.81e-22,91;CL:0000034,8.99e-21,97;CL:0002609,3.51e-19,6;CL:0002613,4.94e-11,3;CL:0000120,7.17e-11,3;CL:0002608,3.32e-10,3;CL:0002612,3.32e-10,3;CL:0002614,1.03e-09,3;CL:0002610,1.79e-09,3;CL:0000107,1.15e-07,9;CL:0002611,1.95e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.53e-27!73;UBERON:0005743!1.53e-27!73;UBERON:0000073!2.85e-27!75;UBERON:0001016!2.85e-27!75;UBERON:0004121!1.58e-23!102;UBERON:0000924!1.58e-23!102;UBERON:0006601!1.58e-23!102;UBERON:0002346!3.40e-20!71;UBERON:0003075!3.40e-20!71;UBERON:0007284!3.40e-20!71;UBERON:0002020!1.42e-16!34;UBERON:0001049!1.69e-16!52;UBERON:0005068!1.69e-16!52;UBERON:0006241!1.69e-16!52;UBERON:0007135!1.69e-16!52;UBERON:0000033!2.76e-15!63;UBERON:0000955!1.93e-14!50;UBERON:0006238!1.93e-14!50;UBERON:0002616!6.51e-14!49;UBERON:0003056!2.97e-12!49;UBERON:0002791!5.36e-12!29;UBERON:0003528!5.36e-12!29;UBERON:0001893!5.36e-12!29;UBERON:0003080!1.84e-10!40;UBERON:0002780!6.24e-10!39;UBERON:0001890!6.24e-10!39;UBERON:0006240!6.24e-10!39;UBERON:0007811!7.22e-09!86;UBERON:0003076!2.25e-07!12;UBERON:0003057!2.25e-07!12;UBERON:0002240!2.54e-07!6;UBERON:0005174!2.54e-07!6;UBERON:0001137!2.54e-07!6;UBERON:0000153!4.22e-07!94;UBERON:0000956!5.91e-07!21;UBERON:0001869!5.91e-07!21;UBERON:0000203!5.91e-07!21;UBERON:0002420!6.50e-07!8;UBERON:0007245!6.50e-07!8;UBERON:0010009!6.50e-07!8;UBERON:0010011!6.50e-07!8;UBERON:0000454!6.50e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0002020,4.62e-27,34;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0000073,7.39e-22,54;UBERON:0002346,1.30e-17,64;UBERON:0003075,1.30e-17,64;UBERON:0007284,1.30e-17,64;UBERON:0001049,2.18e-16,52;UBERON:0005068,2.18e-16,52;UBERON:0006241,2.18e-16,52;UBERON:0007135,2.18e-16,52;UBERON:0003528,3.43e-16,29;UBERON:0002791,3.43e-16,29;UBERON:0001893,3.43e-16,29;UBERON:0001948,5.23e-16,5;UBERON:0002315,5.23e-16,5;UBERON:0010371,6.50e-15,73;UBERON:0002420,3.64e-14,8;UBERON:0007245,3.64e-14,8;UBERON:0010009,3.64e-14,8;UBERON:0010011,3.64e-14,8;UBERON:0000454,3.64e-14,8;UBERON:0002240,2.69e-13,6;UBERON:0005174,2.69e-13,6;UBERON:0001137,2.69e-13,6;UBERON:0002780,2.32e-11,39;UBERON:0001890,2.32e-11,39;UBERON:0006240,2.32e-11,39;UBERON:0003080,5.19e-11,40;UBERON:0010314,6.04e-11,92;UBERON:0002257,3.32e-10,3;UBERON:0002038,1.03e-09,3;UBERON:0009663,1.03e-09,3;UBERON:0009661,1.03e-09,3;UBERON:0000125,1.03e-09,3;UBERON:0002308,1.03e-09,3;UBERON:0004684,1.79e-09,3;UBERON:0002275,1.79e-09,3;UBERON:0002616,3.11e-09,46;UBERON:0010313,5.27e-09,3;UBERON:0002342,5.27e-09,3;UBERON:0002005,5.27e-09,3;UBERON:0005428,5.27e-09,3;UBERON:0005062,5.27e-09,3;UBERON:0000955,5.55e-09,47;UBERON:0006238,5.55e-09,47;UBERON:0011216,1.08e-08,194;UBERON:0003056,1.65e-08,49;UBERON:0002410,1.15e-07,9;UBERON:0002256,1.95e-07,2;UBERON:0002950,2.15e-07,4;UBERON:0001891,2.15e-07,4;UBERON:0009616,2.15e-07,4;UBERON:0010286,2.15e-07,4;UBERON:0000369,9.27e-07,5;UBERON:0002435,9.27e-07,5;UBERON:0000204,9.27e-07,5;UBERON:0010082,9.27e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,5.05791152148994,11.6378015439847,6.33831403506179,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,0.768436610643109,4.66603255388149,13.3655878948374,3.78584930432488,3.71346279724945,5.07997644188711,2.9397791811589,6.70918297127655,3.67687514644008,2.20231761998777,1.65993539510744,1.84327839907492,6.06676923558892,11.8933936683133,8.33461392890816,3.90856198601933,1.68828783009504,2.13917546887534,3.53554302568401,4.6982654663704,3.91438836233131,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0.449371918214468,0,0.628271760564322,0.173824320192276,0,0.83115217823824,0.648965052271031,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.234423373184406,0,0,1.26203287766503,1.17131623288992,1.07711698866399,0.477937595905104,0.222798674082394,0,0,1.16902343164525,1.18586333383957,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0.847328283455281,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,1.14579102687879,0.68741272937475,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0.31136204275253,0,0.853668028770671,0.243106717068294,0.209613162627982,0.183843508450014,0.888986911206461,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.561849044819294,0.640251524048693,0.287177344778066,0,0.347652977834566,0.77163688185482,0,0.147198920134397,0.685738504770831,0.354951612318675,0.238436189947321,0.436039249896986,0.188218760830661,0.25384382367503,0.182927972872773,0,0.814824683075171,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0,0.499621155875892,0.701794825336225,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr8:125944624..125944663,+ | |||
}} |
Revision as of 15:04, 14 September 2013
Short description: | p@chr8:125944624..125944663, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:125944624..125944663, + |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.20e-70 | 33 |
neuronal stem cell | 2.20e-70 | 33 |
neuroblast | 2.20e-70 | 33 |
electrically signaling cell | 2.20e-70 | 33 |
CNS neuron (sensu Vertebrata) | 3.71e-70 | 23 |
neuroblast (sensu Vertebrata) | 3.71e-70 | 23 |
electrically responsive cell | 7.68e-59 | 39 |
electrically active cell | 7.68e-59 | 39 |
neural cell | 6.23e-53 | 43 |
ectodermal cell | 1.27e-51 | 44 |
neurectodermal cell | 1.27e-51 | 44 |
embryonic cell | 1.13e-30 | 70 |
somatic stem cell | 1.81e-22 | 91 |
multi fate stem cell | 1.81e-22 | 91 |
stem cell | 8.99e-21 | 97 |
neuron of cerebral cortex | 3.51e-19 | 6 |
striatum neuron | 4.94e-11 | 3 |
granule cell | 7.17e-11 | 3 |
hippocampal neuron | 3.32e-10 | 3 |
neuron of the ventral spinal cord | 3.32e-10 | 3 |
neuron of the substantia nigra | 1.03e-09 | 3 |
raphe nuclei neuron | 1.79e-09 | 3 |
autonomic neuron | 1.15e-07 | 9 |
neuron of the dorsal spinal cord | 1.95e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.