FFCP PHASE1:Hg19::chr1:201709054..201709065,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89796 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15989 | |||
|TSSclassifier=strong | |||
|UniProt=F8W780,Q8NEY1 | |||
|association_with_transcript=58bp_to_ENST00000367295,ENST00000367301,uc001gww.1,uc001gwx.2_5end | |||
|coexpression_cluster_id=C2550 | |||
|description=CAGE_peak_5_at_NAV1_5end | |||
|id=chr1:201709054..201709065,+ | |||
|ontology_enrichment_celltype=CL:0000359!1.36e-12!32;CL:0000183!6.80e-11!59;CL:0000222!1.65e-10!119;CL:0000192!1.78e-10!42;CL:0000514!1.78e-10!42;CL:0000680!3.96e-10!57;CL:0000056!3.96e-10!57;CL:0000355!3.96e-10!57;CL:0002321!4.13e-10!248;CL:0000220!5.11e-10!246;CL:0000187!1.00e-09!54;CL:0000055!2.15e-09!180;CL:0000393!4.19e-08!60;CL:0000211!4.19e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.77e-13;32!CL:0000192;7.67e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.60e-13,32;CL:0000192,2.30e-10,43;CL:0000514,2.30e-10,43;CL:0002321,4.84e-08,250;CL:0000222,1.06e-07,121;CL:0000680,1.39e-07,58;CL:0000056,1.39e-07,58;CL:0000355,1.39e-07,58;CL:0000187,1.89e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000514;7.67e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.51e-24!312;UBERON:0000483!5.61e-23!309;UBERON:0000025!4.54e-19!194;UBERON:0002049!2.48e-18!79;UBERON:0007798!2.48e-18!79;UBERON:0000475!2.63e-18!365;UBERON:0004111!1.74e-17!241;UBERON:0000477!1.31e-16!286;UBERON:0004872!1.03e-15!84;UBERON:0001009!5.91e-15!113;UBERON:0001637!1.14e-14!42;UBERON:0003509!1.14e-14!42;UBERON:0004572!1.14e-14!42;UBERON:0001981!1.23e-14!60;UBERON:0007500!1.23e-14!60;UBERON:0004537!1.23e-14!60;UBERON:0006965!1.23e-14!60;UBERON:0004535!7.66e-14!110;UBERON:0000055!4.72e-13!69;UBERON:0003075!5.44e-13!86;UBERON:0007284!5.44e-13!86;UBERON:0002346!1.11e-11!90;UBERON:0003914!2.04e-11!118;UBERON:0004573!2.16e-11!33;UBERON:0004571!2.16e-11!33;UBERON:0002616!3.51e-11!59;UBERON:0000033!8.51e-11!123;UBERON:0004121!1.03e-10!169;UBERON:0000486!1.42e-10!82;UBERON:0000468!1.85e-10!659;UBERON:0000481!1.90e-10!347;UBERON:0000153!5.00e-10!129;UBERON:0007811!5.00e-10!129;UBERON:0000924!5.90e-10!173;UBERON:0006601!5.90e-10!173;UBERON:0001049!1.43e-09!57;UBERON:0005068!1.43e-09!57;UBERON:0006241!1.43e-09!57;UBERON:0007135!1.43e-09!57;UBERON:0003056!2.77e-09!61;UBERON:0001134!3.66e-09!61;UBERON:0002036!3.66e-09!61;UBERON:0003082!3.66e-09!61;UBERON:0007100!4.22e-09!27;UBERON:0002385!4.76e-09!63;UBERON:0001015!4.76e-09!63;UBERON:0000383!4.76e-09!63;UBERON:0000955!6.58e-09!69;UBERON:0006238!6.58e-09!69;UBERON:0005743!1.27e-08!86;UBERON:0001017!6.72e-08!82;UBERON:0000948!8.09e-08!24;UBERON:0005498!8.09e-08!24;UBERON:0004140!8.09e-08!24;UBERON:0009881!8.09e-08!24;UBERON:0004141!8.09e-08!24;UBERON:0003084!8.09e-08!24;UBERON:0007005!8.09e-08!24;UBERON:0004139!8.09e-08!24;UBERON:0004291!8.09e-08!24;UBERON:0004290!1.56e-07!70;UBERON:0000073!2.15e-07!94;UBERON:0001016!2.15e-07!94;UBERON:0002200!3.56e-07!11;UBERON:0006876!3.56e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.59e-12;42!UBERON:0003509;3.59e-12;42!UBERON:0004572;3.59e-12;42!UBERON:0004573;4.61e-11;33!UBERON:0004571;4.61e-11;33!UBERON:0007100;3.25e-08;25!UBERON:0006876;3.33e-08;11!UBERON:0002049;1.64e-07;75!UBERON:0007798;1.64e-07;75!UBERON:0007500;1.68e-07;56!UBERON:0001981;1.68e-07;56!UBERON:0004537;1.68e-07;56!UBERON:0000948;8.97e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,5.27e-18,78;UBERON:0007798,5.27e-18,78;UBERON:0000119,7.68e-18,309;UBERON:0000483,1.43e-16,306;UBERON:0001637,2.76e-16,42;UBERON:0003509,2.76e-16,42;UBERON:0004572,2.76e-16,42;UBERON:0001009,5.47e-16,112;UBERON:0000025,5.71e-16,192;UBERON:0010371,1.63e-15,104;UBERON:0004535,1.06e-14,109;UBERON:0004872,1.34e-14,83;UBERON:0007500,3.66e-14,59;UBERON:0001981,3.66e-14,59;UBERON:0004537,3.66e-14,59;UBERON:0006965,3.66e-14,59;UBERON:0003075,4.36e-14,82;UBERON:0007284,4.36e-14,82;UBERON:0010314,8.56e-14,132;UBERON:0002346,5.72e-13,86;UBERON:0004573,2.23e-12,33;UBERON:0004571,2.23e-12,33;UBERON:0004111,2.42e-12,240;UBERON:0000055,6.92e-12,68;UBERON:0004121,1.58e-10,171;UBERON:0000924,1.58e-10,171;UBERON:0006601,1.58e-10,171;UBERON:0003914,3.18e-10,117;UBERON:0003056,4.89e-10,61;UBERON:0007100,1.98e-09,27;UBERON:0000955,4.05e-09,68;UBERON:0006238,4.05e-09,68;UBERON:0001049,7.93e-09,56;UBERON:0005068,7.93e-09,56;UBERON:0006241,7.93e-09,56;UBERON:0007135,7.93e-09,56;UBERON:0000073,1.78e-08,53;UBERON:0002616,1.78e-08,53;UBERON:0006876,2.60e-08,11;UBERON:0000486,4.84e-08,83;UBERON:0001017,5.82e-08,81;UBERON:0000948,6.19e-08,24;UBERON:0005498,6.19e-08,24;UBERON:0004140,6.19e-08,24;UBERON:0009881,6.19e-08,24;UBERON:0004141,6.19e-08,24;UBERON:0003084,6.19e-08,24;UBERON:0007005,6.19e-08,24;UBERON:0004139,6.19e-08,24;UBERON:0004291,6.19e-08,24;UBERON:0001016,6.46e-07,89;UBERON:0001134,9.54e-07,62;UBERON:0002036,9.54e-07,62;UBERON:0003082,9.54e-07,62 | |||
|phase1_expression=1.81678379270557,3.8538094300377,2.81908808191942,4.00293193412522,0.893922188854576,6.10636966870258,2.53299878168311,0.631719873426831,1.30592814099919,1.72013755551056,0,4.15038607047327,6.59417445571134,1.8564952944007,6.2965501388304,1.34465029290355,0.602694528023977,1.46062018077475,0.975865597581014,5.54044761345546,11.4240387096782,7.52291331547411,2.57612388417951,3.55873505189499,4.77062030460251,0,0,0,0,0,0,1.83884244895785,9.33738348212575,1.10926203050036,0,0,0.293600439334847,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,4.87613732627923,0.670700859703636,4.09160197899297,1.0843174571537,12.0321098552613,6.22840031531542,0.795285947051099,3.89307896242109,3.78139268656271,6.20842312895179,7.55379156960884,0.982343066232845,1.82147644146271,1.48313777113772,0,0,0,0,0,0.371457501329565,1.19257444420023,1.72046919021225,3.47140501607594,3.39184765154406,4.19499436209906,3.02629846134074,2.92592953151535,0.258416759169329,0.35576626268671,1.00416183829401,0,0,0.976248230192678,0,5.67099363517232,0.535798369704479,0.22452937262617,0.900891843866578,1.53316637465883,0.949265659568129,2.38162267109529,0,0,3.48875241714027,6.46063537203914,8.35761376986227,2.78059279707759,4.87622255272983,5.32002573297536,3.92474320099615,6.4049397437823,8.88003174301776,1.24484414159907,10.372721749366,4.7403951902903,19.5251081661962,21.89468513024,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,1.82032272387605,3.59309070908119,0,0,0,0,0,0,5.21788042536097,4.30535125653269,0.640672166455702,0.847727604638247,3.60109315301283,0.721367704669072,3.09168648054755,0.744467425326359,10.126579934476,7.1129013767675,6.81571190459109,0.368199594569197,2.42469085228218,3.55009592516614,1.41052937518696,3.05209066158878,4.44499962275583,6.2731607735892,8.31733326628111,1.21973706129595,0.530119073285941,1.2781333715647,2.28054321033815,1.26160425437814,0.36497735907583,1.56449532329816,3.85944562915731,2.76269842704961,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0.8231480226628,5.88034845542168,0,0,0,0,0.245976877086227,7.3774158428366,6.58501712451753,1.1240175325762,3.82010095164197,3.51836091602412,0,0,8.6598805215164,2.43453850447661,12.5627302832329,0.144366447761074,0,0,5.53143078571493,4.29243081047436,0,0,0,0.93733833986777,7.39121364074982,7.65585525108887,2.95543124919399,4.06887513919547,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,7.28852048244845,9.15516144549888,5.79372457985505,0.517086863031111,3.57656445851882,0,2.39344304926383,3.12022310734098,1.54324424557285,0,2.1313774321288,8.14974563851441,16.8212697671347,9.87888404136923,0,7.10783897485092,0.791951872933429,5.42590878707255,7.84380112740265,12.8965158624854,1.2162378064119,0,0,8.86611965318856,8.04033550838797,0,2.02693829334611,3.28762116080613,0.716243852959582,0,0,0.215627574859517,0,0,0,0,0.335032530668698,1.27587750330633,0,0,0,3.92612773501248,3.00102312635806,2.17012018959788,11.4383973841944,5.53129865271201,3.6271555457805,10.4255859343515,0.601892199455438,0,2.0694614258501,3.98535359121262,2.94990669666725,0,19.9717180611995,13.0394501048125,0,0,0,0.606255142892519,0,0.30239029332968,4.96215615637554,4.910783145218,3.08726103876381,5.50998341799514,5.11707249066703,4.50390979202101,5.93672265779964,0.154209693802656,0,0.0821271560138091,0,0.813472649219715,0.120859449591622,10.0253235151642,0,0.34444334449382,0,0,0,0.15403067420883,2.35304930753057,0,0,1.13733384070897,0.340187410553031,2.15915916102139,3.08454505380579,1.08378575017541,2.50844886927427,0.254876273045038,0,0.223874754722178,0,0,0.769350375349168,4.92021968549559,2.27764876265012,0.103041011647722,0,0,12.6338418359158,11.7010844286574,17.6752322828576,0.386682873168488,0.770243085573222,1.22802939780904,0.275673144969061,0.429680979473094,0.290033387828457,0.596586391912706,0.534192213880424,2.47927373041467,2.69066094311149,7.01869918720213,1.4162089319777,5.11330104227014,6.92587163027408,4.1822236209636,9.85707456563484,2.66153015158511,3.47973196830029,5.37440235401368,2.43312307461385,5.95453390975468,5.06207079549961,3.62197368455267,0.511795582622668,1.71175595213568,4.45484547096312,4.70969184119538,0.359744915166629,3.56898138656871,0.235624804691373,3.841467149893,7.92551605865041,5.05510147486777,1.46290121726877,4.38684281336312,3.16950440270266,0,0.282810863907425,5.65040583101214,10.4759415273764,8.62470667813585,4.82295973779139,1.15755106853338,1.31178950409327,3.44947640836597,5.26699946769575,3.09865162785466,2.58140433967293,3.7334635584986,4.280052617775,0,1.89996871767898,1.97576935775941,5.69209760648573,4.54915136318478,0.962221127255121,3.35151137767894,3.26672954583968,0.0941438007767792,9.47111819876706,6.73885902670502,11.5291839919536,6.66197860600182,0,0,0,0,0,0,0,0,2.99107399156925,0,0,0.185803175125719,0.577076851905779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,1.75809815126273,0,0,0,0.23874448473769,0,0.307160702099232,0,3.23539657744179,0,0,0,8.567663494796,0.552567831062295,0,0,0,2.17727711363265,0.0898683511473268,0.179021174675609,0,0.493217028184668,0,3.33410970433911,3.87733098438087,1.94813006139888,0,1.04171104434093,0,1.44999915086959,0.341380344856499,0.508507300585533,0,0,0,0.173624994933292,2.65722415744152,1.20596438625408,1.52581736317083,0.442317039724898,0.591095237907095,1.75508317723178,0,0,1.46205491157214,0.341826167541004,0,0,0,0.638002319463839,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,6.33570650018364,0,3.27970224015475,0.547364367646998,0,0.728341138602278,0.789168805698781,0,0.30607276163049,5.37085926842148,0.150323419414493,0,0,1.323967823502,0,0,0,0,0,1.17590876897253,1.21882889212564,1.57254001417827,0.687944129886466,0,0,0,1.35784623083787,0.0882561266915003,1.35588444468319,3.15196426687527,0,1.58276989889697,0.782205530939212,1.04206466326994,1.28071796843612,0.19980960958213,2.3054466744657,0,0,0,0.372757606696298,0,0,0,0,1.73370353940911,7.20504346451747,5.06549901900374,0,8.16554338697919,0,2.79282401272254,11.4580212005842,2.15361907373044,6.19004901546872,9.87219910714113,2.67805748930247,20.4237756359648,3.60299883542404,0,0,0,0,0,0,1.59045937961861,3.54128855890097,0,0.275078873194468,0,0.674921674654501,2.32140586367385,2.30848315300494,2.68347750079413,0.551639951094387,1.78345599658994,0.105600336519406,0,1.15149118391667,0.714695326373367,7.94510364438518,23.392705464237,0,1.72844298240254,1.30634944043764,0,0,10.2232813071253,0,0,0,3.87848869084652,2.38018683136842,0,0.704815022316672,0.427149650270779,0.628817220398664,0.414239055347196,0.992332043623902,0.197611631897944,0,1.27668251554036,4.89616023032527,3.0082787282724,5.82056595850577,2.62298104567844,0.157054096250234,0.886068179966986,3.05065662254908,2.253436752717,1.14681839138014,1.55300672151593,2.35966331177257,0.138348634936231,2.24964734331792,0,0,2.82318983637806,0.936669811613763,0.869526171664951,2.23882204330311,0,0.554805861502613,0,0.251567901752575,0,0,0.151230923763239,1.39893480524502,1.77426179987561,2.23015474029183,0,2.32894435314389,4.14706207840855,1.86089200190596,3.65221543268214,6.91185001387205,7.23529903120711,1.22061219961398,0.181848659202559,2.90008504014719,1.39210127963548,3.18476710958893,1.20008329398946,2.74716564146234,1.34699795506368,0,0,0,0,2.04035332961045,5.55653938377201,1.71315693154527,9.84988625948181,1.54400723580486,0,0,8.68113172219117,5.40615810089832,1.02496607435179,0,0.607719912354764,3.04168559533808,0,0.132864840313363,0,0,0.491545817507439,0,0.19998739585493,0.106691729694141,0,1.70254786070051,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,1.23935764259002,0,10.4941435715628,0.552032215008773,0,0,0,1.66995985250795,4.25089728976755,3.03304332208587,2.87162909937057,0.756215088665154,1.72893131160545,2.09918339321406,4.28308260777463,0.490738592505128,0.353909170043221,1.10057159113007,0.231051332300676,16.3994301050882,0,0.198916222116275,0.526472298444801,0.20170506870352,0,0,1.31017534008077,0,2.09366512317023,2.34323429584154,2.06686796501184,2.34638497717455,0.546974809018219,0,0.496211178389294,0,0.127762427639595,1.07140367175657,0.672567444437648,0,0,0,0,0.857440047187092,2.10706172228178,2.10472875401117,0,0,0.941917114206168,1.09980912941201,0,0.913158720509496,0,0,3.14496794377288,0,1.3948971044175,2.26015753993353,0,5.80205259656503,1.7071847709395,3.45629830907046,1.29068207646083,0,0.0852134047591577,0.423387050190929,0,1.86123831398592,4.77769469488717,0.111855431797792,0,0,1.29485767437579,0.615976841137482,0,0.971421986118279,0,0.198950775161368,0,0.11294608203896,0,0.301925687133347,0.231522474323834,0,0.470317296361523,0.980593287015622,0,5.49663707921847,3.26751040359795,0.4226557275834,13.934023404401,0,0.0644578879735772,0,0.178553938605658,1.05868461514708,0.0802413666891683,10.2247094354512,5.96348068425903,3.29681041248338,0.788857810965923,3.05961705859116,1.74540276136151,0,1.11598505450025,0.462175628631418,1.29787968637137,1.64016352285603,0.109265571963696,1.0135880080915,0.203977659483963,0,0,0,0.378893491091197,0,9.12086383404657,3.30985586758065,1.27940389140589,0.23806443146374,0.387533459016037,0.248298857183432,1.90624166387043,0.318235791390825,0.808468755832877,1.08858373948481,0,0.404112318087525,0.860666464712116,3.32660356546013,0.89543595472072,0.533636729388577,0,0.179650404213174,0,0.855690109280065,0.813792356631477,0.665756774185513,2.21401172950129,0 | |||
|short_description=p5@NAV1 | |||
}} |
Revision as of 23:20, 10 January 2014
Short description: | p5@NAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NAV1_5end |
Coexpression cluster: | C2550_Fibroblast_heart_Sebocyte_Mesenchymal_osteoclastoma_Mesothelial_Pericytes |
Association with transcript: | 58bp_to_ENST00000367295, ENST00000367301, uc001gww.1, uc001gwx.2_5end |
EntrezGene: | NAV1 |
HGNC: | 15989 |
UniProt: | F8W780Q8NEY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.60e-13 | 32 |
smooth muscle cell | 2.30e-10 | 43 |
smooth muscle myoblast | 2.30e-10 | 43 |
embryonic cell | 4.84e-08 | 250 |
mesodermal cell | 1.06e-07 | 121 |
muscle precursor cell | 1.39e-07 | 58 |
myoblast | 1.39e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-07 | 58 |
muscle cell | 1.89e-07 | 55 |