FFCP PHASE1:Hg19::chr1:208417601..208417615,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5362 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9100 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=30bp_to_ENST00000486969_5end | |||
|description=CAGE_peak_3_at_PLXNA2_5end | |||
|id=chr1:208417601..208417615,- | |||
|ontology_enrichment_celltype=CL:0002139!6.00e-11!24;CL:0002078!8.20e-11!44;CL:0000115!2.67e-10!35;CL:0000071!1.98e-09!18;CL:0002546!1.98e-09!18;CL:0000213!2.04e-07!57;CL:0000215!2.04e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.94e-11;24!CL:0000071;7.00e-11;18!CL:1000413;3.23e-10;9!CL:0000115;2.48e-08;36!CL:0002544;8.38e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.09e-11,24;CL:0000071,1.06e-10,18;CL:0002546,1.06e-10,18;CL:1000413,3.87e-10,9;CL:0000115,9.54e-10,36;CL:0002078,1.72e-07,45;CL:0002544,2.07e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;7.00e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-21!115;UBERON:0001049!1.37e-21!57;UBERON:0005068!1.37e-21!57;UBERON:0006241!1.37e-21!57;UBERON:0007135!1.37e-21!57;UBERON:0000025!1.82e-20!194;UBERON:0001017!9.65e-20!82;UBERON:0004111!1.54e-19!241;UBERON:0002616!9.16e-19!59;UBERON:0005743!2.50e-18!86;UBERON:0000073!2.82e-18!94;UBERON:0001016!2.82e-18!94;UBERON:0000955!1.65e-17!69;UBERON:0006238!1.65e-17!69;UBERON:0002780!8.43e-17!41;UBERON:0001890!8.43e-17!41;UBERON:0006240!8.43e-17!41;UBERON:0000477!1.77e-16!286;UBERON:0000468!3.11e-16!659;UBERON:0003080!6.57e-16!42;UBERON:0000483!1.17e-15!309;UBERON:0000119!1.27e-15!312;UBERON:0003075!1.73e-15!86;UBERON:0007284!1.73e-15!86;UBERON:0001893!2.65e-15!34;UBERON:0000467!2.83e-15!625;UBERON:0000480!4.76e-15!626;UBERON:0002020!6.81e-15!34;UBERON:0003528!6.81e-15!34;UBERON:0001869!8.63e-15!32;UBERON:0002791!1.05e-14!33;UBERON:0002346!1.79e-13!90;UBERON:0004121!2.68e-13!169;UBERON:0000064!1.09e-12!219;UBERON:0000924!4.76e-12!173;UBERON:0006601!4.76e-12!173;UBERON:0000956!1.85e-11!25;UBERON:0000203!1.85e-11!25;UBERON:0000922!9.42e-11!612;UBERON:0000475!1.25e-10!365;UBERON:0000923!2.27e-10!604;UBERON:0005291!2.27e-10!604;UBERON:0006598!2.27e-10!604;UBERON:0002532!2.27e-10!604;UBERON:0002619!2.52e-10!22;UBERON:0000033!3.22e-10!123;UBERON:0002050!3.48e-10!605;UBERON:0005423!3.48e-10!605;UBERON:0000153!5.55e-10!129;UBERON:0007811!5.55e-10!129;UBERON:0003056!1.14e-09!61;UBERON:0001986!1.98e-09!18;UBERON:0004638!1.98e-09!18;UBERON:0004852!1.98e-09!18;UBERON:0001950!3.40e-09!20;UBERON:0000481!6.37e-08!347;UBERON:0000062!6.86e-08!511;UBERON:0006914!1.99e-07!25;UBERON:0003076!6.29e-07!15;UBERON:0003057!6.29e-07!15;UBERON:0000487!7.93e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.66e-20;32!UBERON:0001893;1.41e-19;34!UBERON:0000073;3.11e-19;53!UBERON:0002616;3.11e-19;53!UBERON:0002791;4.92e-19;32!UBERON:0000956;1.61e-18;25!UBERON:0000203;1.61e-18;25!UBERON:0003528;3.78e-18;34!UBERON:0002020;3.78e-18;34!UBERON:0002780;7.99e-18;41!UBERON:0001890;7.99e-18;41!UBERON:0002619;8.19e-18;22!UBERON:0001950;9.06e-16;20!UBERON:0000955;5.54e-11;68!UBERON:0004638;7.00e-11;18!UBERON:0001986;7.00e-11;18!UBERON:0004852;7.00e-11;18!UBERON:0001017;1.45e-10;75!UBERON:0003915;3.23e-10;9!UBERON:0004700;3.23e-10;9!UBERON:0001917;3.23e-10;9!UBERON:0001016;1.47e-09;83!UBERON:0000487;3.60e-08;22!UBERON:0004732;5.28e-08;13!UBERON:0006914;9.13e-08;25!UBERON:0007023;2.36e-07;114!UBERON:0004733;2.59e-07;12!UBERON:0002028;2.59e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.16e-33,56;UBERON:0005068,2.16e-33,56;UBERON:0006241,2.16e-33,56;UBERON:0007135,2.16e-33,56;UBERON:0000073,2.62e-32,53;UBERON:0002616,2.62e-32,53;UBERON:0007023,6.32e-30,114;UBERON:0001017,7.02e-29,81;UBERON:0001016,9.87e-27,89;UBERON:0002780,1.03e-25,41;UBERON:0001890,1.03e-25,41;UBERON:0003080,1.03e-25,41;UBERON:0006240,1.03e-25,41;UBERON:0000955,1.87e-24,68;UBERON:0006238,1.87e-24,68;UBERON:0001869,1.34e-23,32;UBERON:0001893,2.43e-23,34;UBERON:0003075,1.93e-22,82;UBERON:0007284,1.93e-22,82;UBERON:0003528,1.51e-21,34;UBERON:0002020,1.51e-21,34;UBERON:0002791,1.52e-21,32;UBERON:0002346,1.14e-20,86;UBERON:0000025,2.54e-19,192;UBERON:0000956,6.15e-19,25;UBERON:0000203,6.15e-19,25;UBERON:0002619,2.66e-18,22;UBERON:0004111,3.41e-17,240;UBERON:0010371,7.35e-17,104;UBERON:0001950,3.30e-16,20;UBERON:0003056,6.84e-16,61;UBERON:0010314,2.78e-14,132;UBERON:0004121,1.35e-13,171;UBERON:0000924,1.35e-13,171;UBERON:0006601,1.35e-13,171;UBERON:0011216,1.87e-12,223;UBERON:0004638,1.06e-10,18;UBERON:0001986,1.06e-10,18;UBERON:0004852,1.06e-10,18;UBERON:0000483,1.23e-10,306;UBERON:0000119,2.66e-10,309;UBERON:0003915,3.87e-10,9;UBERON:0004700,3.87e-10,9;UBERON:0001917,3.87e-10,9;UBERON:0003076,8.93e-09,15;UBERON:0003057,8.93e-09,15;UBERON:0004732,1.79e-08,13;UBERON:0000487,4.94e-08,22;UBERON:0004733,8.96e-08,12;UBERON:0002028,8.96e-08,12;UBERON:0007277,8.96e-08,12;UBERON:0006914,9.29e-08,25;UBERON:0000349,5.62e-07,5;UBERON:0002680,6.91e-07,9;UBERON:0001895,6.91e-07,9;UBERON:0010092,6.91e-07,9 | |||
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| |||
|short_description=p3@PLXNA2 | |||
}} |
Revision as of 23:56, 10 January 2014
Short description: | p3@PLXNA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLXNA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000486969_5end |
EntrezGene: | PLXNA2 |
HGNC: | 9100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.09e-11 | 24 |
blood vessel endothelial cell | 1.06e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.06e-10 | 18 |
endothelial cell of artery | 3.87e-10 | 9 |
endothelial cell | 9.54e-10 | 36 |
meso-epithelial cell | 1.72e-07 | 45 |
aortic endothelial cell | 2.07e-07 | 6 |