FFCP PHASE1:Hg19::chr11:102668879..102668898,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4312 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7155 | |||
|TSSclassifier=not | |||
|UniProt=P03956 | |||
|association_with_transcript=0bp_to_ENST00000315274_5end | |||
|coexpression_cluster_id=C422 | |||
|description=CAGE_peak_1_at_MMP1_5end | |||
|id=chr11:102668879..102668898,- | |||
|ontology_enrichment_celltype=CL:0000220!4.14e-26!246;CL:0000055!6.13e-26!180;CL:0002321!1.68e-25!248;CL:0000222!2.77e-19!119;CL:0002371!6.36e-19!591;CL:0000144!1.44e-16!625;CL:0000548!1.70e-16!679;CL:0000004!1.70e-16!679;CL:0000255!1.70e-16!679;CL:0000012!1.03e-15!682;CL:0000187!1.23e-15!54;CL:0000680!1.38e-15!57;CL:0000056!1.38e-15!57;CL:0000355!1.38e-15!57;CL:0000183!2.01e-14!59;CL:0000359!4.77e-14!32;CL:0000192!6.19e-14!42;CL:0000514!6.19e-14!42;CL:0000393!1.79e-13!60;CL:0000211!1.79e-13!60;CL:0000057!1.14e-12!75;CL:0002139!1.95e-11!24;CL:0000115!6.49e-09!35;CL:0000071!1.04e-08!18;CL:0002546!1.04e-08!18;CL:0000003!1.71e-08!722;CL:0002494!5.81e-08!16;CL:0002620!6.64e-08!23;CL:0002539!1.42e-07!10;CL:0002078!5.35e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.21e-14;32!CL:0002139;1.54e-12;24!CL:0000192;3.98e-11;43!CL:0000071;1.64e-09;18!CL:0000115;1.66e-09;36!CL:0000187;3.81e-09;55!CL:0002620;9.21e-09;23!CL:0002494;1.22e-08;16!CL:0002539;3.03e-08;10!CL:0000393;1.32e-07;61!CL:0000211;1.32e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.03e-24,250;CL:0000222,2.57e-19,121;CL:0000187,2.20e-16,55;CL:0000680,2.34e-16,58;CL:0000056,2.34e-16,58;CL:0000355,2.34e-16,58;CL:0000359,2.42e-15,32;CL:0000057,6.20e-15,76;CL:0000192,9.12e-15,43;CL:0000514,9.12e-15,43;CL:0000393,1.75e-14,61;CL:0000211,1.75e-14,61;CL:0002139,1.55e-12,24;CL:0000115,8.90e-11,36;CL:0000071,1.67e-09,18;CL:0002546,1.67e-09,18;CL:0002620,9.24e-09,23;CL:0002494,1.12e-08,16;CL:0002539,3.02e-08,10;CL:0002078,2.93e-07,45;CL:0000723,3.67e-07,433;CL:0000048,6.38e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000514;3.98e-11;43!CL:0002546;1.64e-09;18!CL:0000355;1.40e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!7.17e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.83e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.83e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!8.46e-25!42;UBERON:0003509!8.46e-25!42;UBERON:0004572!8.46e-25!42;UBERON:0004872!3.22e-23!84;UBERON:0000055!8.70e-22!69;UBERON:0001981!1.40e-21!60;UBERON:0007500!1.40e-21!60;UBERON:0004537!1.40e-21!60;UBERON:0006965!1.40e-21!60;UBERON:0004573!1.05e-19!33;UBERON:0004571!1.05e-19!33;UBERON:0002049!2.71e-19!79;UBERON:0007798!2.71e-19!79;UBERON:0000914!6.12e-19!83;UBERON:0002329!6.12e-19!83;UBERON:0003077!6.12e-19!83;UBERON:0003059!6.12e-19!83;UBERON:0007282!6.12e-19!83;UBERON:0009618!6.12e-19!83;UBERON:0007285!6.12e-19!83;UBERON:0003914!8.14e-19!118;UBERON:0000490!8.68e-18!138;UBERON:0000486!2.96e-17!82;UBERON:0004290!6.57e-17!70;UBERON:0004535!1.76e-16!110;UBERON:0005256!7.48e-16!143;UBERON:0001009!1.35e-15!113;UBERON:0003102!3.29e-14!95;UBERON:0000467!1.45e-13!625;UBERON:0000480!2.49e-13!626;UBERON:0001134!3.70e-13!61;UBERON:0002036!3.70e-13!61;UBERON:0003082!3.70e-13!61;UBERON:0002385!1.17e-12!63;UBERON:0001015!1.17e-12!63;UBERON:0000383!1.17e-12!63;UBERON:0000468!1.32e-12!659;UBERON:0000947!1.66e-12!21;UBERON:0010191!1.66e-12!21;UBERON:0002199!3.95e-11!45;UBERON:0002416!3.95e-11!45;UBERON:0002100!7.53e-11!216;UBERON:0000926!7.71e-11!448;UBERON:0004120!7.71e-11!448;UBERON:0006603!7.71e-11!448;UBERON:0002097!6.64e-10!40;UBERON:0000119!1.52e-09!312;UBERON:0000483!2.62e-09!309;UBERON:0000923!9.76e-09!604;UBERON:0005291!9.76e-09!604;UBERON:0006598!9.76e-09!604;UBERON:0002532!9.76e-09!604;UBERON:0001986!1.04e-08!18;UBERON:0004638!1.04e-08!18;UBERON:0004852!1.04e-08!18;UBERON:0000487!1.13e-08!22;UBERON:0000922!1.40e-08!612;UBERON:0002050!1.49e-08!605;UBERON:0005423!1.49e-08!605;UBERON:0003104!1.98e-08!238;UBERON:0009142!1.98e-08!238;UBERON:0006914!6.54e-08!25;UBERON:0004237!1.42e-07!10;UBERON:0004695!1.42e-07!10;UBERON:0002111!1.42e-07!10;UBERON:0004178!1.42e-07!10;UBERON:0000475!1.73e-07!365;UBERON:0001135!4.88e-07!15;UBERON:0004111!6.73e-07!241;UBERON:0000481!6.87e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.46e-19;42!UBERON:0003509;1.46e-19;42!UBERON:0004572;1.46e-19;42!UBERON:0004573;1.51e-19;33!UBERON:0004571;1.51e-19;33!UBERON:0007500;1.43e-14;56!UBERON:0001981;1.43e-14;56!UBERON:0004537;1.43e-14;56!UBERON:0000947;2.68e-13;21!UBERON:0010191;2.68e-13;21!UBERON:0000055;7.72e-13;65!UBERON:0002049;4.95e-10;75!UBERON:0007798;4.95e-10;75!UBERON:0003914;5.53e-10;74!UBERON:0004638;1.64e-09;18!UBERON:0001986;1.64e-09;18!UBERON:0004852;1.64e-09;18!UBERON:0000487;1.32e-08;22!UBERON:0004237;3.03e-08;10!UBERON:0004695;3.03e-08;10!UBERON:0002111;3.03e-08;10!UBERON:0004178;3.03e-08;10!UBERON:0006914;5.41e-08;25!UBERON:0002097;5.42e-08;41!UBERON:0001135;7.89e-08;15!UBERON:0002199;1.42e-07;46!UBERON:0002416;1.42e-07;46!UBERON:0000490;8.93e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,6.04e-27,42;UBERON:0003509,6.04e-27,42;UBERON:0004572,6.04e-27,42;UBERON:0004872,3.26e-25,83;UBERON:0000055,1.27e-24,68;UBERON:0007500,5.95e-24,59;UBERON:0001981,5.95e-24,59;UBERON:0004537,5.95e-24,59;UBERON:0006965,5.95e-24,59;UBERON:0004573,2.77e-21,33;UBERON:0004571,2.77e-21,33;UBERON:0002049,3.36e-21,78;UBERON:0007798,3.36e-21,78;UBERON:0000490,7.94e-21,148;UBERON:0003914,1.37e-19,117;UBERON:0007503,2.23e-19,78;UBERON:0000486,1.89e-18,83;UBERON:0002329,4.77e-18,71;UBERON:0003059,4.77e-18,71;UBERON:0007282,4.77e-18,71;UBERON:0004290,4.77e-18,71;UBERON:0009618,4.77e-18,71;UBERON:0007524,7.92e-18,73;UBERON:0003077,1.93e-17,72;UBERON:0007285,1.93e-17,72;UBERON:0004535,5.90e-17,109;UBERON:0001009,1.15e-15,112;UBERON:0003102,4.80e-15,99;UBERON:0005256,6.39e-15,122;UBERON:0001134,6.22e-14,62;UBERON:0002036,6.22e-14,62;UBERON:0003082,6.22e-14,62;UBERON:0002385,1.61e-13,64;UBERON:0001015,1.61e-13,64;UBERON:0000383,1.61e-13,64;UBERON:0000947,2.70e-13,21;UBERON:0010191,2.70e-13,21;UBERON:0000926,3.19e-12,315;UBERON:0004120,3.19e-12,315;UBERON:0006603,3.19e-12,315;UBERON:0002199,1.53e-11,46;UBERON:0002416,1.53e-11,46;UBERON:0003104,7.37e-11,160;UBERON:0009142,7.37e-11,160;UBERON:0002097,3.43e-10,41;UBERON:0004638,1.67e-09,18;UBERON:0001986,1.67e-09,18;UBERON:0004852,1.67e-09,18;UBERON:0000119,8.13e-09,309;UBERON:0000487,1.34e-08,22;UBERON:0000483,1.42e-08,306;UBERON:0004237,3.02e-08,10;UBERON:0004695,3.02e-08,10;UBERON:0002111,3.02e-08,10;UBERON:0004178,3.02e-08,10;UBERON:0006914,5.55e-08,25;UBERON:0001135,8.02e-08,15;UBERON:0002100,1.15e-07,199;UBERON:0004111,3.37e-07,240;UBERON:0002050,3.51e-07,564;UBERON:0000923,7.99e-07,560;UBERON:0010316,7.99e-07,560;UBERON:0005291,7.99e-07,560;UBERON:0006598,7.99e-07,560;UBERON:0010317,7.99e-07,560;UBERON:0002532,7.99e-07,560 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0,0,0,0,5.06599756336621,18.3198763293781,5.22371256399677,187.740727487153,8.37361401566913,0,0,7.79728023648294,5.63375538737457,2780.06448057809,2893.53642904311,2728.43849768723,3107.64399549674,2.33930010345897,3.26401105990805,0,0,0.684372125364421,1.75759695432724,0.229240217243854,0.164201178899891,0,0,0,0.619264493264304,68.9565918359195,0.6024118375565,18.8574545185062,0,0,0,2.76997704265939,0.200544447470142,0.217010870715852,0,0,0,0,2.64513160582167,0.727752183563449,0.464858073811369,20.5583944010913,33.1385816857761,5.46615545412086,42.7788379903598,65.0326132193609,1.37898272294647,52.2842593702899,44.6907405761328,0.188242339542605,5.18521685109907,7.64059847113288,0.306083892370903,8.02322567690234,7.03270838378945,0,5.58498241340569,2.55734850319616,1.16083695451434,26.6671055604836,34.2552236947566,11.3061899365534,85.0017157024928,95.3459028255462,0,35.7229306907938,35.1273250059382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,4.87613732627923,85.8497100420654,84.7728785022606,3.61439152384566,4.51204119572301,9.99440980829684,1313.01709858136,397.094054166951,0.756278537312543,1.10864698731282,10.452339497482,0.458426764241994,0,0.370784442784429,0.324547393654683,0.174129737299267,1.19662164466979,0,0,0,2571.7867889178,4197.08458952278,1854.07741908616,2501.48764301374,1103.70301666826,750.522018412504,941.940314181405,169.779810774249,3530.9801571656,3754.56111338131,1957.34765183335,6.84244895146661,490.076611556724,23.1627740617897,1263.82143869555,14.2879565254528,7.4094692966636,6.30624290706604,2867.02112061202,1081.2135862481,1550.98596411483,0,0,2.18047026071267,11.9273268406876,6719.64810148093,2110.46993298189,4607.74347570894,3091.99895600528,592.075545750276,21.349799145941,2764.64988265953,26.7641490443799,343.646924449774,464.55872864845,0,0,1.17160715916898,3398.17459637487,1247.05140189617,199.364539856103,924.20950432643,425.725843688186,504.218396061072,1854.53649167945,1192.47555246264,609.002154249962,123.552297157334,54.3987244412825,0,0,277.417915796301,433.410552836484,2676.43935557721,2.19488810440419,0.612975591598039,129.505206777486,87.9099419490163,33.7252515095061,7.47450860864986,9.32500365102072,827.951334096866,516.19011895534,122.121615981628,111.483996942622,387.172906161465,56.7083370038176,333.969883324963,189.254591608567,1.2931684545505,64.9667554305404,19.9489154490728,157.860911441064,958.767092543116,280.92850420856,252.388043942323,0.121973706129595,0,1.39432731443422,2.798848485415,2.27088765788066,0,1307.91809027726,128.648187638577,29.0083334840209,3.71494342425583,11.5500717067134,0,0,0,0,0,0,0,0,0,0,2.80483547606892,1.2347220339942,0,0,0.982827216677626,1.18157981336281,0,20.9080345523293,4.63233087806019,24.4743136461235,78.6812272803337,31.1639814476056,2.4998880192803,0,10.3993478527958,37.5261489265711,1.73895607462615,0.939269553886573,1172.11118937216,666.699138110319,19.9766859846328,0,0,0.246217006087397,0.702012795417713,0,1570.97905761838,2.18376766658517,43.9502801451398,24.7181522659861,14.8223308642121,31.4373796915473,0.492663237895943,0.176096868026452,0,0,0,124.074885446898,215.441472014869,0,118.039987755667,58.3031883627844,0.300343057843917,255.243004339106,2.5790149399433,1.30788020649984,29.9953589007686,4.26596662000667,0,807.26412869098,1.86156681609409,2.08014873822732,0,0,0,6.29103172095849,0,0.823240336780769,929.976806158613,4.26470338491055,3.16780749173372,110.929690757928,2.61460037580088,56.5847130090443,0,1.00451418286425,0,366.865653757613,8.04033550838797,22.8219048065149,2.17171960001369,1.64381058040307,19.3385840299087,0,0,0,0.256686072559497,38.6223828818144,1.30139853857622,2.31986643833309,3.51784157202132,5.74144876487847,0,0,0,1.10422342547226,12.0040925054323,0.271265023699736,9.15071790735551,0.356857977594324,0.157702415033935,18.9769092288195,0.601892199455438,0,190.390451178209,0,65.0823164952212,1645.14123995315,0,0,0.206768026122887,0,0.426910231213777,1.21251028578504,6.65741758041988,11.7932214398575,7.19512642674453,7.366174717827,8.41980283299221,0.256278298511402,3.58195074346692,3.86049410744658,0,3210.95424435889,1153.97365281001,3144.3202951447,2138.28973937815,1359.08037608922,24.2927493679161,93.4360151613307,154.14357547869,22.8480751847567,133.10864381291,16.1283030400092,0.902399225814824,7.3164570249194,0,2.92278449306521,5.48868470242954,101.222711823098,958.818216643719,207.063363541952,7.71136263451447,1.35473218771926,1.50506932156456,0.254876273045038,0.831076008928724,0.223874754722178,0,0,39.2368691428075,0,0,6.38854272215878,0,0,1361.58359058892,270.425062351193,197.641233708316,69.2162342971593,26.8044593779481,18.1134336176833,115.644884314521,0.214840489736547,9.42608510442485,99.4594741945897,3.02708921198907,202.639306232559,77.6447872155029,28.7128603112814,102.97862091095,122.719225014483,2556.59106861163,2782.57278248111,233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| |||
|short_description=p1@MMP1 | |||
}} |
Revision as of 10:04, 11 January 2014
Short description: | p1@MMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MMP1_5end |
Coexpression cluster: | C422_mesenchymal_Smooth_Fibroblast_papillary_Endothelial_fibrous_osteosarcoma |
Association with transcript: | 0bp_to_ENST00000315274_5end |
EntrezGene: | MMP1 |
HGNC: | 7155 |
UniProt: | P03956 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.03e-24 | 250 |
mesodermal cell | 2.57e-19 | 121 |
muscle cell | 2.20e-16 | 55 |
muscle precursor cell | 2.34e-16 | 58 |
myoblast | 2.34e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.34e-16 | 58 |
vascular associated smooth muscle cell | 2.42e-15 | 32 |
fibroblast | 6.20e-15 | 76 |
smooth muscle cell | 9.12e-15 | 43 |
smooth muscle myoblast | 9.12e-15 | 43 |
electrically responsive cell | 1.75e-14 | 61 |
electrically active cell | 1.75e-14 | 61 |
endothelial cell of vascular tree | 1.55e-12 | 24 |
endothelial cell | 8.90e-11 | 36 |
blood vessel endothelial cell | 1.67e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.67e-09 | 18 |
skin fibroblast | 9.24e-09 | 23 |
cardiocyte | 1.12e-08 | 16 |
aortic smooth muscle cell | 3.02e-08 | 10 |
meso-epithelial cell | 2.93e-07 | 45 |
somatic stem cell | 3.67e-07 | 433 |
multi fate stem cell | 6.38e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.83e-07 | 14 |