FFCP PHASE1:Hg19::chr12:54778471..54778528,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25946 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17521 | |||
|TSSclassifier=strong | |||
|UniProt=Q96PM9,F8VSJ1,F8VY43,F1T0F1 | |||
|association_with_transcript=0bp_to_ENST00000394313,ENST00000547210,ENST00000550120,NM_015481,uc001sfw.1,uc010sov.1_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_ZNF385A_5end | |||
|id=chr12:54778471..54778528,- | |||
|ontology_enrichment_celltype=CL:0000763!1.98e-47!112;CL:0000049!1.98e-47!112;CL:0000037!3.29e-44!172;CL:0000566!3.29e-44!172;CL:0002009!3.73e-43!65;CL:0002194!6.85e-42!63;CL:0000576!6.85e-42!63;CL:0000040!6.85e-42!63;CL:0000559!6.85e-42!63;CL:0002032!2.98e-41!165;CL:0000837!2.98e-41!165;CL:0000988!1.12e-40!182;CL:0000557!6.52e-40!71;CL:0000766!5.01e-38!76;CL:0000839!3.32e-36!70;CL:0000738!3.46e-35!140;CL:0002057!3.12e-34!42;CL:0000860!1.94e-33!45;CL:0002087!2.99e-33!119;CL:0002031!4.06e-30!124;CL:0002393!8.72e-08!9;CL:0002397!8.72e-08!9;CL:0000451!3.38e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.04e-30;33!CL:0002057;2.04e-30;33!CL:0000473;2.13e-30;39!CL:0000234;2.13e-30;39!CL:0000576;3.21e-29;48!CL:0000766;1.54e-19;69!CL:0000763;1.23e-16;100!CL:0002087;7.11e-10;104!CL:0000738;1.89e-08;136!CL:0000451;2.34e-08;10!CL:0000988;3.88e-08;177!CL:0000235;2.78e-07;6!CL:0000990;3.14e-07;8!CL:0002393;7.55e-07;6!CL:0002397;7.55e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.82e-55,108;CL:0000049,1.82e-55,108;CL:0002009,1.23e-54,61;CL:0002194,4.08e-53,59;CL:0000576,4.08e-53,59;CL:0000040,4.08e-53,59;CL:0000559,4.08e-53,59;CL:0000557,6.11e-49,67;CL:0000473,3.32e-47,48;CL:0000234,3.32e-47,48;CL:0000766,7.06e-46,72;CL:0000839,1.14e-44,66;CL:0000037,1.01e-43,168;CL:0000988,2.31e-41,177;CL:0000860,3.47e-41,42;CL:0002057,3.47e-41,42;CL:0002032,3.14e-40,161;CL:0000837,3.14e-40,161;CL:0000738,2.47e-34,136;CL:0002087,7.00e-33,115;CL:0002031,7.57e-29,120;CL:0002393,4.18e-09,9;CL:0002397,4.18e-09,9;CL:0000451,2.15e-08,10;CL:0000990,2.77e-07,8;CL:0000235,2.80e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-29;42!CL:0000049;1.35e-16;108 | |||
|ontology_enrichment_disease=DOID:8692!2.32e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.66e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.57e-11,31;DOID:1240,5.05e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-40!102;UBERON:0003061!1.31e-40!102;UBERON:0007023!8.01e-37!115;UBERON:0002193!9.37e-36!112;UBERON:0002371!1.64e-34!80;UBERON:0001474!1.64e-30!86;UBERON:0004765!6.13e-24!101;UBERON:0001434!6.13e-24!101;UBERON:0002405!1.65e-23!115;UBERON:0001049!2.06e-13!57;UBERON:0005068!2.06e-13!57;UBERON:0006241!2.06e-13!57;UBERON:0007135!2.06e-13!57;UBERON:0002616!1.64e-10!59;UBERON:0003080!3.28e-10!42;UBERON:0002780!5.57e-10!41;UBERON:0001890!5.57e-10!41;UBERON:0006240!5.57e-10!41;UBERON:0003081!3.71e-09!216;UBERON:0000955!6.50e-09!69;UBERON:0006238!6.50e-09!69;UBERON:0002204!6.92e-09!167;UBERON:0003075!2.13e-08!86;UBERON:0007284!2.13e-08!86;UBERON:0001017!6.02e-08!82;UBERON:0000479!1.04e-07!787;UBERON:0002020!1.05e-07!34;UBERON:0003528!1.05e-07!34;UBERON:0001893!1.17e-07!34;UBERON:0005743!1.97e-07!86;UBERON:0002791!2.44e-07!33;UBERON:0002346!2.55e-07!90;UBERON:0002619!3.60e-07!22;UBERON:0001869!7.72e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.99e-09;114!UBERON:0000178;7.15e-08;15!UBERON:0000179;7.15e-08;15!UBERON:0000463;7.15e-08;15!UBERON:0002780;3.15e-07;41!UBERON:0001890;3.15e-07;41!UBERON:0000073;4.64e-07;53!UBERON:0002616;4.64e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.83e-48,98;UBERON:0003061,1.83e-48,98;UBERON:0002193,1.37e-43,108;UBERON:0002371,3.42e-41,76;UBERON:0007023,8.00e-38,114;UBERON:0002405,3.27e-36,93;UBERON:0001474,3.39e-36,82;UBERON:0004765,1.25e-30,90;UBERON:0001434,6.56e-26,100;UBERON:0003081,5.14e-15,203;UBERON:0001049,1.09e-12,56;UBERON:0005068,1.09e-12,56;UBERON:0006241,1.09e-12,56;UBERON:0007135,1.09e-12,56;UBERON:0000073,2.25e-11,53;UBERON:0002616,2.25e-11,53;UBERON:0002204,1.12e-09,167;UBERON:0002780,3.63e-09,41;UBERON:0001890,3.63e-09,41;UBERON:0003080,3.63e-09,41;UBERON:0006240,3.63e-09,41;UBERON:0000479,3.82e-09,773;UBERON:0000955,4.84e-08,68;UBERON:0006238,4.84e-08,68;UBERON:0000178,7.23e-08,15;UBERON:0000179,7.23e-08,15;UBERON:0000463,7.23e-08,15;UBERON:0001017,1.11e-07,81;UBERON:0003528,3.71e-07,34;UBERON:0002020,3.71e-07,34;UBERON:0001893,4.14e-07,34;UBERON:0003075,6.13e-07,82;UBERON:0007284,6.13e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,4.70627602516243,0,0,0,0.123121058076788,0,0,0,0,0,0.61130724598361,0.985207073399349,0.236132343941038,168.75327476818,131.653483547344,208.537318106754,0,0,0,0.154934401160603,0,3.22960483268332,147.362778669479,260.707781711184,170.136522641228,75.2355993446146,123.079593087212,99.1665935391618,391.848253510927,356.337014898547,333.795668194435,357.940716834754,237.655039276615,205.645030274349,356.163181694822,317.383115389556,194.388392968417,218.22401590628,163.307624946708,178.762962304531,356.530991093693,233.880570599574,144.047753529299,284.351936012569,197.692280678874,203.309206004095,497.415760681568,405.509615944778,402.356164502863,186.024121960922,124.25736420736,109.616715823221,295.970927672444,311.84678521528,193.732449476964,200.992634874278,145.1013885791,85.1283822215979,87.248433246832,82.2778640864719,86.7986792404676,176.131293637704,189.523238765981,214.890109413996,41.326847842481,35.8050018958362,40.7341062895134,1.75996244461323,0,0.889509253863555,6.82768356106412,0.800791974072025,0,1.32208974556972,0,2.27685187643779,4.69789751496751,2.6759125968766,0,10.0891541336676,1.05353633910031,0.393419540227666,0.786021525498329,1.23360899399706,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0,0,0,2.86708872891687,0,0,8.88393202558859,4.60751800155906,8.74515085866421,9.23431282971666,2.46338399076314,0.201606743224732,0,0.579297615531196,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.43917392846563,6.7454223881322,0,0,76.91773229616,86.8907389123343,125.113440848252,16.6943437013739,8.00792875092179,6.68623502393217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0,0,3.90135220418193,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0.245668634623536,0.723280468230358,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,15.6449532329816,17.3675053312079,1.38134921352481,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,1.96565443335525,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0,127.786626159359,233.770260874098,220.717275998761,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,221.355280766967,198.893808207122,250.892387984808,0,0,0,0,0,0,0,8.07826116827902,1.2937654491571,9.75407075726088,0,0,0,0,0,0.749007023947182,0,0,0,0.500170521059677,0,0,0,0,0.234282829985426,0,0,0,0,0,0,15.6640925970192,3.0882908142977,81.6733703185405,129.644234691989,83.9945879913107,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04900957073839,0,0,0.574265537996172,0,0,0,0,0,0,0.107420244868274,0,0.340906509664404,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.64735247149625,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,3.38917682796405,0,0,0,0,38.0585706924127,30.585488285695,43.8628334124105,24.0614093212367,35.3771554854127,44.0961851611048,42.6624835418111,53.9325119880104,0.213648142254946,2.88743956579008,0,0,0,0,0,0.399158742865633,10.1497846170154,30.0576487467914,6.81706074576566,13.478264549446,18.7152436807218,5.01375666473674,25.0634477090067,29.2874775596774,37.2564334240583,38.5437440734901,8.0910785161162,21.2973313748574,54.3816152825971,66.8791562598324,70.7440360858492,35.3652452677693,0,11.0778659052941,12.9818725668472,7.66065526394986,1.4098700508785,0,31.6457667227291,0,0.111443384277478,0,0.23874448473769,6.23625829748541,0,2.98244294329889,5.34543782359948,0,0,0,5.18044769452781,6.07824614168525,0,0,0.123084805461069,0,0,0,38.8795001372423,8.28604607350242,62.2656040102043,0,7.75466196876175,3.4324196319885,3.99227596002388,0,0,2.17499872630438,0,0,0,0,0,0,0,3.73848959738765,4.5774520895125,1.3269511191747,2.65992857058193,1.97446857438575,0,0.139423744278603,2.46240827212151,0,0,0.987334088507493,0.54323685961004,3.19001159731919,0.732780747214898,5.33034776018635,0,3.76752615348059,4.82013877510454,0,0,0.167821586975843,0,0.158936578980379,0,0.163232808159148,0.141353071433941,0,2.98578579323551,2.29989667708682,5.49927130440263,0,0,0,9.0991529523914,4.01288823649394,9.13631338328823,0,0,0,0.789168805698781,3.62972148145992,0.91821828489147,24.7059526347388,0,0,0,0,0,0,0.569219092059585,0,0,0,0,4.54289337429278,0,0.19351266257817,0.219267951258557,0.246346371159628,2.71569246167574,0,5.64951851951331,0,0,3.41878298161745,0.391102765469606,0,2.98834192635094,0.19980960958213,0,0,0,0,0,0,0,0,0,0,2.40168115483916,12.3214841002794,5.10986352267889,0,0,1.67569440763353,2.06244381610515,0.717873024576814,2.1964690054889,2.14613024068285,1.56220020209311,1.74677028465488,0,0,0,0,0,0,4.48768659948658,3.18091875923721,5.17572943223987,0,0,0,20.697598022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| |||
|short_description=p1@ZNF385A | |||
}} |
Revision as of 13:50, 11 January 2014
Short description: | p1@ZNF385A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF385A_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000394313, ENST00000547210, ENST00000550120, NM_015481, uc001sfw.1, uc010sov.1_5end |
EntrezGene: | ZNF385A |
HGNC: | 17521 |
UniProt: | Q96PM9F8VSJ1F8VY43F1T0F1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.82e-55 | 108 |
common myeloid progenitor | 1.82e-55 | 108 |
macrophage dendritic cell progenitor | 1.23e-54 | 61 |
monopoietic cell | 4.08e-53 | 59 |
monocyte | 4.08e-53 | 59 |
monoblast | 4.08e-53 | 59 |
promonocyte | 4.08e-53 | 59 |
granulocyte monocyte progenitor cell | 6.11e-49 | 67 |
defensive cell | 3.32e-47 | 48 |
phagocyte | 3.32e-47 | 48 |
myeloid leukocyte | 7.06e-46 | 72 |
myeloid lineage restricted progenitor cell | 1.14e-44 | 66 |
hematopoietic stem cell | 1.01e-43 | 168 |
hematopoietic cell | 2.31e-41 | 177 |
classical monocyte | 3.47e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.47e-41 | 42 |
hematopoietic oligopotent progenitor cell | 3.14e-40 | 161 |
hematopoietic multipotent progenitor cell | 3.14e-40 | 161 |
leukocyte | 2.47e-34 | 136 |
nongranular leukocyte | 7.00e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 7.57e-29 | 120 |
intermediate monocyte | 4.18e-09 | 9 |
CD14-positive, CD16-positive monocyte | 4.18e-09 | 9 |
dendritic cell | 2.15e-08 | 10 |
conventional dendritic cell | 2.77e-07 | 8 |
macrophage | 2.80e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.83e-48 | 98 |
blood island | 1.83e-48 | 98 |
hemolymphoid system | 1.37e-43 | 108 |
bone marrow | 3.42e-41 | 76 |
adult organism | 8.00e-38 | 114 |
immune system | 3.27e-36 | 93 |
bone element | 3.39e-36 | 82 |
skeletal element | 1.25e-30 | 90 |
skeletal system | 6.56e-26 | 100 |
lateral plate mesoderm | 5.14e-15 | 203 |
neural tube | 1.09e-12 | 56 |
neural rod | 1.09e-12 | 56 |
future spinal cord | 1.09e-12 | 56 |
neural keel | 1.09e-12 | 56 |
regional part of nervous system | 2.25e-11 | 53 |
regional part of brain | 2.25e-11 | 53 |
musculoskeletal system | 1.12e-09 | 167 |
regional part of forebrain | 3.63e-09 | 41 |
forebrain | 3.63e-09 | 41 |
anterior neural tube | 3.63e-09 | 41 |
future forebrain | 3.63e-09 | 41 |
tissue | 3.82e-09 | 773 |
brain | 4.84e-08 | 68 |
future brain | 4.84e-08 | 68 |
blood | 7.23e-08 | 15 |
haemolymphatic fluid | 7.23e-08 | 15 |
organism substance | 7.23e-08 | 15 |
central nervous system | 1.11e-07 | 81 |
brain grey matter | 3.71e-07 | 34 |
gray matter | 3.71e-07 | 34 |
telencephalon | 4.14e-07 | 34 |
neural plate | 6.13e-07 | 82 |
presumptive neural plate | 6.13e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.57e-11 | 31 |
leukemia | 5.05e-07 | 39 |